RNA–Protein interactions for RNA: ENST00000535297.1

TMEM258-203, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-203ENST00000535297 ACRV1P26436 265 aa13.55□□□□□ -0.24
TMEM258-203ENST00000535297 RPL10P27635 214 aaKnown RBP13.55□□□□□ -0.24
TMEM258-203ENST00000535297 RPL22P35268 128 aaKnown RBP13.55□□□□□ -0.24
TMEM258-203ENST00000535297 SLC19A1P41440 591 aa13.55□□□□□ -0.24
TMEM258-203ENST00000535297 PPM1FP49593 454 aaPredicted RBP13.55□□□□□ -0.24
TMEM258-203ENST00000535297 PRLHRP49683 370 aa13.55□□□□□ -0.24
TMEM258-203ENST00000535297 DRG2P55039 364 aaKnown RBP13.55□□□□□ -0.24
TMEM258-203ENST00000535297 CFHR1Q03591 330 aa13.55□□□□□ -0.24
TMEM258-203ENST00000535297 CACNG1Q06432 222 aa13.55□□□□□ -0.24
TMEM258-203ENST00000535297 CCDC173Q0VFZ6 552 aa13.55□□□□□ -0.24
TMEM258-203ENST00000535297 C16orf72Q14CZ0 275 aa13.55□□□□□ -0.24
TMEM258-203ENST00000535297 SKIDA1Q1XH10 827 aa13.55□□□□□ -0.24
TMEM258-203ENST00000535297 COL28A1Q2UY09 1125 aa13.55□□□□□ -0.24
TMEM258-203ENST00000535297 ZRANB3Q5FWF4 1079 aa13.55□□□□□ -0.24
TMEM258-203ENST00000535297 FNBP1LQ5T0N5 605 aa13.55□□□□□ -0.24
TMEM258-203ENST00000535297 WDR74Q6RFH5 385 aaPredicted RBP13.55□□□□□ -0.24
TMEM258-203ENST00000535297 C19orf48Q6RUI8 117 aa13.55□□□□□ -0.24
TMEM258-203ENST00000535297 TMEM26Q6ZUK4 368 aa13.55□□□□□ -0.24
TMEM258-203ENST00000535297 DET1Q7L5Y6 550 aa13.55□□□□□ -0.24
TMEM258-203ENST00000535297 GSTA5Q7RTV2 222 aa13.55□□□□□ -0.24
TMEM258-203ENST00000535297 PRUNE1Q86TP1 453 aa13.55□□□□□ -0.24
TMEM258-203ENST00000535297 RASGEF1CQ8N431 466 aa13.55□□□□□ -0.24
TMEM258-203ENST00000535297 PRELID2Q8N945 189 aa13.55□□□□□ -0.24
TMEM258-203ENST00000535297 HNRNPLLQ8WVV9 542 aaKnown RBP13.55□□□□□ -0.24
TMEM258-203ENST00000535297 KCNE4Q8WWG9 221 aa13.55□□□□□ -0.24
TMEM258-203ENST00000535297 CXorf40BQ96DE9 158 aa13.55□□□□□ -0.24
TMEM258-203ENST00000535297 SGF29Q96ES7 293 aa13.55□□□□□ -0.24
TMEM258-203ENST00000535297 CCDC97Q96F63 343 aaPredicted RBP13.55□□□□□ -0.24
TMEM258-203ENST00000535297 CDKN2AIPNLQ96HQ2 116 aa13.55□□□□□ -0.24
TMEM258-203ENST00000535297 LINC00615Q96LM1 132 aaPredicted RBP13.55□□□□□ -0.24
TMEM258-203ENST00000535297 RANBP9Q96S59 729 aa13.55□□□□□ -0.24
TMEM258-203ENST00000535297 CASS4Q9NQ75 786 aa13.55□□□□□ -0.24
TMEM258-203ENST00000535297 ZDHHC3Q9NYG2 299 aa13.55□□□□□ -0.24
TMEM258-203ENST00000535297 PDP2Q9P2J9 529 aa13.55□□□□□ -0.24
TMEM258-203ENST00000535297 PISDQ9UG56 409 aa13.55□□□□□ -0.24
TMEM258-203ENST00000535297 RIMKLBQ9ULI2 386 aa13.55□□□□□ -0.24
TMEM258-203ENST00000535297 LHX6Q9UPM6 363 aa13.55□□□□□ -0.24
TMEM258-203ENST00000535297 AHCTF1Q8WYP5 2266 aa13.55□□□□□ -0.24
TMEM258-203ENST00000535297 LAMA5O15230 3695 aa13.54□□□□□ -0.24
TMEM258-203ENST00000535297 OR52A4PA6NMU1 304 aa13.54□□□□□ -0.24
TMEM258-203ENST00000535297 SGTAO43765 313 aa13.54□□□□□ -0.24
TMEM258-203ENST00000535297 ZSCAN5DPP0CG00 497 aa13.54□□□□□ -0.24
TMEM258-203ENST00000535297 PBLDP30039 288 aaPredicted RBP13.54□□□□□ -0.24
TMEM258-203ENST00000535297 NFE2L1Q14494 772 aa13.54□□□□□ -0.24
TMEM258-203ENST00000535297 METRNLQ641Q3 311 aa13.54□□□□□ -0.24
TMEM258-203ENST00000535297 FAM83HQ6ZRV2 1179 aaPredicted RBP13.54□□□□□ -0.24
TMEM258-203ENST00000535297 SERPINA9Q86WD7 417 aa13.54□□□□□ -0.24
TMEM258-203ENST00000535297 SPACA3Q8IXA5 215 aa13.54□□□□□ -0.24
TMEM258-203ENST00000535297 BEND7Q8N7W2 519 aaPredicted RBP13.54□□□□□ -0.24
TMEM258-203ENST00000535297 OR2L2Q8NH16 312 aa13.54□□□□□ -0.24
TMEM258-203ENST00000535297 HM13Q8TCT9 377 aa13.54□□□□□ -0.24
TMEM258-203ENST00000535297 PDLIM2Q96JY6 352 aa13.54□□□□□ -0.24
TMEM258-203ENST00000535297 NAP1L3Q99457 506 aaPredicted RBP13.54□□□□□ -0.24
TMEM258-203ENST00000535297 TBC1D10AQ9BXI6 508 aa13.54□□□□□ -0.24
TMEM258-203ENST00000535297 DPH1Q9BZG8 443 aa13.54□□□□□ -0.24
TMEM258-203ENST00000535297 B3GNT4Q9C0J1 378 aa13.54□□□□□ -0.24
TMEM258-203ENST00000535297 FAM96AQ9H5X1 160 aa13.54□□□□□ -0.24
TMEM258-203ENST00000535297 TMEM9Q9P0T7 183 aa13.54□□□□□ -0.24
TMEM258-203ENST00000535297 ACSL6Q9UKU0 697 aa13.54□□□□□ -0.24
TMEM258-203ENST00000535297 TTC7AQ9ULT0 858 aaPredicted RBP13.54□□□□□ -0.24
TMEM258-203ENST00000535297 WDR37Q9Y2I8 494 aa13.54□□□□□ -0.24
TMEM258-203ENST00000535297 MN1Q10571 1320 aaPredicted RBP13.54□□□□□ -0.24
TMEM258-203ENST00000535297 ITPR1Q14643 2758 aa13.53□□□□□ -0.24
TMEM258-203ENST00000535297 PIKFYVEQ9Y2I7 2098 aa13.53□□□□□ -0.24
TMEM258-203ENST00000535297 NVLO15381 856 aaKnown RBP13.53□□□□□ -0.24
TMEM258-203ENST00000535297 KIF5CO60282 957 aa13.53□□□□□ -0.24
TMEM258-203ENST00000535297 ATP1B2P14415 290 aaPredicted RBP13.53□□□□□ -0.24
TMEM258-203ENST00000535297 ITIH1P19827 911 aa13.53□□□□□ -0.24
TMEM258-203ENST00000535297 ADRA1DP25100 572 aa13.53□□□□□ -0.24
TMEM258-203ENST00000535297 ITPKBP27987 946 aa13.53□□□□□ -0.24
TMEM258-203ENST00000535297 SLC5A2P31639 672 aa13.53□□□□□ -0.24
TMEM258-203ENST00000535297 CSTF2P33240 577 aaKnown RBP eCLIP13.53□□□□□ -0.24
TMEM258-203ENST00000535297 GRIA1P42261 906 aa13.53□□□□□ -0.24
TMEM258-203ENST00000535297 MAPK9P45984 424 aa13.53□□□□□ -0.24
TMEM258-203ENST00000535297 KCNJ1P48048 391 aa13.53□□□□□ -0.24
TMEM258-203ENST00000535297 ARSDP51689 593 aa13.53□□□□□ -0.24
TMEM258-203ENST00000535297 BASP1P80723 227 aaKnown RBP13.53□□□□□ -0.24
TMEM258-203ENST00000535297 TLE3Q04726 772 aa13.53□□□□□ -0.24
TMEM258-203ENST00000535297 ITIH4Q14624 930 aa13.53□□□□□ -0.24
TMEM258-203ENST00000535297 CLCA4Q14CN2 919 aa13.53□□□□□ -0.24
TMEM258-203ENST00000535297 CCDC38Q502W7 563 aa13.53□□□□□ -0.24
TMEM258-203ENST00000535297 TSTD2Q5T7W7 516 aa13.53□□□□□ -0.24
TMEM258-203ENST00000535297 NLRP9Q7RTR0 991 aa13.53□□□□□ -0.24
TMEM258-203ENST00000535297 TAS2R42Q7RTR8 314 aa13.53□□□□□ -0.24
TMEM258-203ENST00000535297 JAMLQ86YT9 394 aa13.53□□□□□ -0.24
TMEM258-203ENST00000535297 SLC35F6Q8N357 371 aa13.53□□□□□ -0.24
TMEM258-203ENST00000535297 AGBL5Q8NDL9 886 aa13.53□□□□□ -0.24
TMEM258-203ENST00000535297 RCBTB1Q8NDN9 531 aa13.53□□□□□ -0.24
TMEM258-203ENST00000535297 NCSTNQ92542 709 aa13.53□□□□□ -0.24
TMEM258-203ENST00000535297 PEX13Q92968 403 aa13.53□□□□□ -0.24
TMEM258-203ENST00000535297 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.53□□□□□ -0.24
TMEM258-203ENST00000535297 VPS37BQ9H9H4 285 aa13.53□□□□□ -0.24
TMEM258-203ENST00000535297 SLC40A1Q9NP59 571 aa13.53□□□□□ -0.24
TMEM258-203ENST00000535297 ACSL5Q9ULC5 683 aa13.53□□□□□ -0.24
TMEM258-203ENST00000535297 TCAF1Q9Y4C2 921 aa13.53□□□□□ -0.24
TMEM258-203ENST00000535297 BPTFQ12830 3046 aa13.53□□□□□ -0.24
TMEM258-203ENST00000535297 C17orf113A0A1B0GUU1 675 aa13.52□□□□□ -0.25
TMEM258-203ENST00000535297 CCDC78A2IDD5 438 aa13.52□□□□□ -0.25
TMEM258-203ENST00000535297 AP3B1O00203 1094 aa13.52□□□□□ -0.25
TMEM258-203ENST00000535297 PGRMC1O00264 195 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms