RNA–Protein interactions for RNA: ENST00000533811.1

PACS1-214, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-214ENST00000533811 CLIP3Q96DZ5 547 aa9.05□□□□□ -0.96
PACS1-214ENST00000533811 LYSMD1Q96S90 227 aa9.05□□□□□ -0.96
PACS1-214ENST00000533811 SMAD5Q99717 465 aaKnown RBP9.05□□□□□ -0.96
PACS1-214ENST00000533811 ZSCAN5AQ9BUG6 496 aa9.05□□□□□ -0.96
PACS1-214ENST00000533811 TUBB2BQ9BVA1 445 aa9.05□□□□□ -0.96
PACS1-214ENST00000533811 UNKQ9C0B0 810 aaKnown RBP9.05□□□□□ -0.96
PACS1-214ENST00000533811 SLC7A5P2Q9GIP4 190 aa9.05□□□□□ -0.96
PACS1-214ENST00000533811 RAB33BQ9H082 229 aa9.05□□□□□ -0.96
PACS1-214ENST00000533811 ZFYVE1Q9HBF4 777 aa9.05□□□□□ -0.96
PACS1-214ENST00000533811 PCDH18Q9HCL0 1135 aa9.05□□□□□ -0.96
PACS1-214ENST00000533811 KCND1Q9NSA2 647 aa9.05□□□□□ -0.96
PACS1-214ENST00000533811 HAUS2Q9NVX0 235 aa9.05□□□□□ -0.96
PACS1-214ENST00000533811 TCFL5Q9UL49 500 aa9.05□□□□□ -0.96
PACS1-214ENST00000533811 RPL26L1Q9UNX3 145 aaKnown RBP9.05□□□□□ -0.96
PACS1-214ENST00000533811 WDR37Q9Y2I8 494 aa9.05□□□□□ -0.96
PACS1-214ENST00000533811 COPG1Q9Y678 874 aaKnown RBP9.05□□□□□ -0.96
PACS1-214ENST00000533811 FER1L5A0AVI2 2057 aa9.04□□□□□ -0.96
PACS1-214ENST00000533811 CSMD1Q96PZ7 3565 aa9.04□□□□□ -0.96
PACS1-214ENST00000533811 RGSL1A5PLK6 1076 aa9.04□□□□□ -0.96
PACS1-214ENST00000533811 ANKRD66B4E2M5 251 aa9.04□□□□□ -0.96
PACS1-214ENST00000533811 GPR89AB7ZAQ6 455 aa9.04□□□□□ -0.96
PACS1-214ENST00000533811 MEN1O00255 615 aa9.04□□□□□ -0.96
PACS1-214ENST00000533811 CHUKO15111 745 aa9.04□□□□□ -0.96
PACS1-214ENST00000533811 MATN3O15232 486 aa9.04□□□□□ -0.96
PACS1-214ENST00000533811 LCA5LO95447 670 aa9.04□□□□□ -0.96
PACS1-214ENST00000533811 FTLP02792 175 aaPredicted RBP9.04□□□□□ -0.96
PACS1-214ENST00000533811 RAB40ALP0C0E4 278 aa9.04□□□□□ -0.96
PACS1-214ENST00000533811 GPR89BP0CG08 455 aa9.04□□□□□ -0.96
PACS1-214ENST00000533811 FECHP22830 423 aa9.04□□□□□ -0.96
PACS1-214ENST00000533811 PBLDP30039 288 aaPredicted RBP9.04□□□□□ -0.96
PACS1-214ENST00000533811 SSR1P43307 286 aaKnown RBP9.04□□□□□ -0.96
PACS1-214ENST00000533811 PER3P56645 1201 aa9.04□□□□□ -0.96
PACS1-214ENST00000533811 PTCHD3Q3KNS1 767 aa9.04□□□□□ -0.96
PACS1-214ENST00000533811 KHDC1Q4VXA5 237 aaKnown RBP9.04□□□□□ -0.96
PACS1-214ENST00000533811 BOLA3Q53S33 107 aa9.04□□□□□ -0.96
PACS1-214ENST00000533811 PLEKHS1Q5SXH7 462 aa9.04□□□□□ -0.96
PACS1-214ENST00000533811 VWA5B1Q5TIE3 1220 aa9.04□□□□□ -0.96
PACS1-214ENST00000533811 AGAP9Q5VTM2 703 aa9.04□□□□□ -0.96
PACS1-214ENST00000533811 IZUMO3Q5VZ72 239 aa9.04□□□□□ -0.96
PACS1-214ENST00000533811 TXNRD3NBQ6F5E7 133 aa9.04□□□□□ -0.96
PACS1-214ENST00000533811 TIGD7Q6NT04 549 aaPredicted RBP9.04□□□□□ -0.96
PACS1-214ENST00000533811 MED25Q71SY5 747 aa9.04□□□□□ -0.96
PACS1-214ENST00000533811 KMT5CQ86Y97 462 aa9.04□□□□□ -0.96
PACS1-214ENST00000533811 RAB43Q86YS6 212 aa9.04□□□□□ -0.96
PACS1-214ENST00000533811 ZNF547Q8IVP9 402 aa9.04□□□□□ -0.96
PACS1-214ENST00000533811 MCEMP1Q8IX19 187 aa9.04□□□□□ -0.96
PACS1-214ENST00000533811 DSELQ8IZU8 1212 aa9.04□□□□□ -0.96
PACS1-214ENST00000533811 TRAM1L1Q8N609 369 aa9.04□□□□□ -0.96
PACS1-214ENST00000533811 ZBTB2Q8N680 514 aa9.04□□□□□ -0.96
PACS1-214ENST00000533811 GLIS1Q8NBF1 620 aa9.04□□□□□ -0.96
PACS1-214ENST00000533811 ANKRD20A12PQ8NF67 263 aa9.04□□□□□ -0.96
PACS1-214ENST00000533811 ARRDC2Q8TBH0 407 aa9.04□□□□□ -0.96
PACS1-214ENST00000533811 CPT1BQ92523 772 aa9.04□□□□□ -0.96
PACS1-214ENST00000533811 MAML1Q92585 1016 aa9.04□□□□□ -0.96
PACS1-214ENST00000533811 ZNF501Q96CX3 271 aaPredicted RBP9.04□□□□□ -0.96
PACS1-214ENST00000533811 NUP85Q9BW27 656 aa9.04□□□□□ -0.96
PACS1-214ENST00000533811 TLR10Q9BXR5 811 aa9.04□□□□□ -0.96
PACS1-214ENST00000533811 NLNQ9BYT8 704 aa9.04□□□□□ -0.96
PACS1-214ENST00000533811 GPR63Q9BZJ6 419 aa9.04□□□□□ -0.96
PACS1-214ENST00000533811 NUP62CLQ9H1M0 184 aa9.04□□□□□ -0.96
PACS1-214ENST00000533811 FANCEQ9HB96 536 aa9.04□□□□□ -0.96
PACS1-214ENST00000533811 IMP3Q9NV31 184 aaKnown RBP9.04□□□□□ -0.96
PACS1-214ENST00000533811 HRASLS2Q9NWW9 162 aa9.04□□□□□ -0.96
PACS1-214ENST00000533811 SEMA5BQ9P283 1151 aa9.04□□□□□ -0.96
PACS1-214ENST00000533811 B3GNT3Q9Y2A9 372 aa9.04□□□□□ -0.96
PACS1-214ENST00000533811 CFAP20Q9Y6A4 193 aaKnown RBP9.04□□□□□ -0.96
PACS1-214ENST00000533811 SCINQ9Y6U3 715 aa9.04□□□□□ -0.96
PACS1-214ENST00000533811 POLEQ07864 2286 aa9.04□□□□□ -0.96
PACS1-214ENST00000533811 PCSK5Q92824 1860 aa9.04□□□□□ -0.96
PACS1-214ENST00000533811 CNTRLQ7Z7A1 2325 aa9.03□□□□□ -0.96
PACS1-214ENST00000533811 OR5K3A6NET4 321 aa9.03□□□□□ -0.96
PACS1-214ENST00000533811 LGALS16A8MUM7 142 aa9.03□□□□□ -0.96
PACS1-214ENST00000533811 TMEM150CB9EJG8 249 aa9.03□□□□□ -0.96
PACS1-214ENST00000533811 C9J4A7 227 aa9.03□□□□□ -0.96
PACS1-214ENST00000533811 PRSS44E7EML9 344 aa9.03□□□□□ -0.96
PACS1-214ENST00000533811 LRRTM2O43300 516 aa9.03□□□□□ -0.96
PACS1-214ENST00000533811 VEGFDO43915 354 aa9.03□□□□□ -0.96
PACS1-214ENST00000533811 ZBTB11O95625 1053 aaPredicted RBP9.03□□□□□ -0.96
PACS1-214ENST00000533811 ALPPP05187 535 aa9.03□□□□□ -0.96
PACS1-214ENST00000533811 CYP2A7P20853 494 aa9.03□□□□□ -0.96
PACS1-214ENST00000533811 PCK1P35558 622 aa9.03□□□□□ -0.96
PACS1-214ENST00000533811 GALNT2Q10471 571 aa9.03□□□□□ -0.96
PACS1-214ENST00000533811 ABRQ12979 859 aa9.03□□□□□ -0.96
PACS1-214ENST00000533811 XRCC4Q13426 336 aa9.03□□□□□ -0.96
PACS1-214ENST00000533811 LLGL1Q15334 1064 aa9.03□□□□□ -0.96
PACS1-214ENST00000533811 RPE65Q16518 533 aa9.03□□□□□ -0.96
PACS1-214ENST00000533811 PCSK7Q16549 785 aa9.03□□□□□ -0.96
PACS1-214ENST00000533811 IFI16Q16666 785 aaKnown RBP9.03□□□□□ -0.96
PACS1-214ENST00000533811 FAM182AQ5T1J6 154 aa9.03□□□□□ -0.96
PACS1-214ENST00000533811 CDKAL1Q5VV42 579 aa9.03□□□□□ -0.96
PACS1-214ENST00000533811 ALG1LQ6GMV1 187 aa9.03□□□□□ -0.96
PACS1-214ENST00000533811 DUS1LQ6P1R4 473 aaKnown RBP9.03□□□□□ -0.96
PACS1-214ENST00000533811 MYO7BQ6PIF6 2116 aa9.03□□□□□ -0.96
PACS1-214ENST00000533811 FAM198BQ6UWH4 519 aa9.03□□□□□ -0.96
PACS1-214ENST00000533811 WASH2PQ6VEQ5 465 aa9.03□□□□□ -0.96
PACS1-214ENST00000533811 ZC3H18Q86VM9 953 aaKnown RBP9.03□□□□□ -0.96
PACS1-214ENST00000533811 OOSP2Q86WS3 158 aa9.03□□□□□ -0.96
PACS1-214ENST00000533811 LRRC49Q8IUZ0 686 aa9.03□□□□□ -0.96
PACS1-214ENST00000533811 SYTL1Q8IYJ3 562 aa9.03□□□□□ -0.96
PACS1-214ENST00000533811 D2HGDHQ8N465 521 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms