RNA–Protein interactions for RNA: ENST00000528048.5

SDHD-205, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 1 (best) BASIC

Gene SDHD, Length 905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-205ENST00000528048 RIMKLBQ9ULI2 386 aa11.91□□□□□ -0.5
SDHD-205ENST00000528048 COL5A1P20908 1838 aaPredicted RBP11.9□□□□□ -0.5
SDHD-205ENST00000528048 IGHV1OR21-1A0A087WYE8 117 aa11.9□□□□□ -0.5
SDHD-205ENST00000528048 AGAP14A8MT82 685 aa11.9□□□□□ -0.5
SDHD-205ENST00000528048 DUX1O43812 170 aa11.9□□□□□ -0.5
SDHD-205ENST00000528048 PHF2O75151 1096 aa11.9□□□□□ -0.5
SDHD-205ENST00000528048 JMJD7P0C870 316 aa11.9□□□□□ -0.5
SDHD-205ENST00000528048 AMD1P17707 334 aa11.9□□□□□ -0.5
SDHD-205ENST00000528048 ACRV1P26436 265 aa11.9□□□□□ -0.5
SDHD-205ENST00000528048 PBLDP30039 288 aaPredicted RBP11.9□□□□□ -0.5
SDHD-205ENST00000528048 CCKBRP32239 447 aa11.9□□□□□ -0.5
SDHD-205ENST00000528048 GRIA1P42261 906 aa11.9□□□□□ -0.5
SDHD-205ENST00000528048 PAFAH1B1P43034 410 aa11.9□□□□□ -0.5
SDHD-205ENST00000528048 EPHA4P54764 986 aa11.9□□□□□ -0.5
SDHD-205ENST00000528048 DRG2P55039 364 aaKnown RBP11.9□□□□□ -0.5
SDHD-205ENST00000528048 SQSTM1Q13501 440 aa11.9□□□□□ -0.5
SDHD-205ENST00000528048 BCL7AQ4VC05 210 aa11.9□□□□□ -0.5
SDHD-205ENST00000528048 FASTKD1Q53R41 847 aaKnown RBP11.9□□□□□ -0.5
SDHD-205ENST00000528048 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.9□□□□□ -0.5
SDHD-205ENST00000528048 NKAIN2Q5VXU1 208 aa11.9□□□□□ -0.5
SDHD-205ENST00000528048 RAB11FIP2Q7L804 512 aa11.9□□□□□ -0.5
SDHD-205ENST00000528048 RBM12BQ8IXT5 1001 aaKnown RBP11.9□□□□□ -0.5
SDHD-205ENST00000528048 CFAP206Q8IYR0 622 aa11.9□□□□□ -0.5
SDHD-205ENST00000528048 NCSTNQ92542 709 aa11.9□□□□□ -0.5
SDHD-205ENST00000528048 HDAC10Q969S8 669 aa11.9□□□□□ -0.5
SDHD-205ENST00000528048 LIN37Q96GY3 246 aaPredicted RBP11.9□□□□□ -0.5
SDHD-205ENST00000528048 THSD1Q9NS62 852 aa11.9□□□□□ -0.5
SDHD-205ENST00000528048 SATB2Q9UPW6 733 aa11.9□□□□□ -0.5
SDHD-205ENST00000528048 RAXQ9Y2V3 346 aa11.9□□□□□ -0.5
SDHD-205ENST00000528048 PCDHGA8Q9Y5G5 932 aa11.9□□□□□ -0.5
SDHD-205ENST00000528048 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.89□□□□□ -0.51
SDHD-205ENST00000528048 CCDC162PA2VCL2 907 aa11.89□□□□□ -0.51
SDHD-205ENST00000528048 A6NCN8 305 aa11.89□□□□□ -0.51
SDHD-205ENST00000528048 SRRM3A6NNA2 597 aaPredicted RBP11.89□□□□□ -0.51
SDHD-205ENST00000528048 USP27XA6NNY8 438 aa11.89□□□□□ -0.51
SDHD-205ENST00000528048 QSOX1O00391 747 aa11.89□□□□□ -0.51
SDHD-205ENST00000528048 PLD2O14939 933 aa11.89□□□□□ -0.51
SDHD-205ENST00000528048 ZNF185O15231 689 aa11.89□□□□□ -0.51
SDHD-205ENST00000528048 AP2A2O94973 939 aa11.89□□□□□ -0.51
SDHD-205ENST00000528048 TNFSF15O95150 251 aa11.89□□□□□ -0.51
SDHD-205ENST00000528048 POLBP06746 335 aa11.89□□□□□ -0.51
SDHD-205ENST00000528048 GSTM1P09488 218 aa11.89□□□□□ -0.51
SDHD-205ENST00000528048 TPSB2P20231 275 aa11.89□□□□□ -0.51
SDHD-205ENST00000528048 CSTF2P33240 577 aaKnown RBP eCLIP11.89□□□□□ -0.51
SDHD-205ENST00000528048 CA5AP35218 305 aa11.89□□□□□ -0.51
SDHD-205ENST00000528048 SLC19A1P41440 591 aa11.89□□□□□ -0.51
SDHD-205ENST00000528048 NSG1P42857 185 aa11.89□□□□□ -0.51
SDHD-205ENST00000528048 FNTAP49354 379 aa11.89□□□□□ -0.51
SDHD-205ENST00000528048 CDKN1CP49918 316 aaPredicted RBP11.89□□□□□ -0.51
SDHD-205ENST00000528048 ERVPABLB-1P60509 514 aa11.89□□□□□ -0.51
SDHD-205ENST00000528048 GSTM4Q03013 218 aa11.89□□□□□ -0.51
SDHD-205ENST00000528048 ZFP36L1Q07352 338 aaKnown RBP11.89□□□□□ -0.51
SDHD-205ENST00000528048 DMPKQ09013 629 aa11.89□□□□□ -0.51
SDHD-205ENST00000528048 TRA2AQ13595 282 aaKnown RBP eCLIP11.89□□□□□ -0.51
SDHD-205ENST00000528048 NFE2L1Q14494 772 aa11.89□□□□□ -0.51
SDHD-205ENST00000528048 PPP1R7Q15435 360 aa11.89□□□□□ -0.51
SDHD-205ENST00000528048 TPSAB1Q15661 275 aa11.89□□□□□ -0.51
SDHD-205ENST00000528048 CYP1B1Q16678 543 aa11.89□□□□□ -0.51
SDHD-205ENST00000528048 TBC1D25Q3MII6 688 aa11.89□□□□□ -0.51
SDHD-205ENST00000528048 METRNLQ641Q3 311 aa11.89□□□□□ -0.51
SDHD-205ENST00000528048 TMEM71Q6P5X7 295 aa11.89□□□□□ -0.51
SDHD-205ENST00000528048 LRRC8BQ6P9F7 803 aa11.89□□□□□ -0.51
SDHD-205ENST00000528048 AFTPHQ6ULP2 937 aa11.89□□□□□ -0.51
SDHD-205ENST00000528048 CERS6Q6ZMG9 384 aa11.89□□□□□ -0.51
SDHD-205ENST00000528048 C11orf96Q7Z7L8 435 aa11.89□□□□□ -0.51
SDHD-205ENST00000528048 B3GNT8Q7Z7M8 397 aa11.89□□□□□ -0.51
SDHD-205ENST00000528048 ZNF761Q86XN6 746 aaPredicted RBP11.89□□□□□ -0.51
SDHD-205ENST00000528048 OR4D9Q8NGE8 314 aa11.89□□□□□ -0.51
SDHD-205ENST00000528048 OR2L2Q8NH16 312 aa11.89□□□□□ -0.51
SDHD-205ENST00000528048 OR4L1Q8NH43 312 aa11.89□□□□□ -0.51
SDHD-205ENST00000528048 PEX13Q92968 403 aa11.89□□□□□ -0.51
SDHD-205ENST00000528048 LINC00615Q96LM1 132 aaPredicted RBP11.89□□□□□ -0.51
SDHD-205ENST00000528048 SLC46A1Q96NT5 459 aa11.89□□□□□ -0.51
SDHD-205ENST00000528048 NAPGQ99747 312 aaPredicted RBP11.89□□□□□ -0.51
SDHD-205ENST00000528048 CCM2Q9BSQ5 444 aa11.89□□□□□ -0.51
SDHD-205ENST00000528048 UCK1Q9HA47 277 aa11.89□□□□□ -0.51
SDHD-205ENST00000528048 POT1Q9NUX5 634 aa11.89□□□□□ -0.51
SDHD-205ENST00000528048 SCHIP1Q9P0W5 487 aaPredicted RBP11.89□□□□□ -0.51
SDHD-205ENST00000528048 FAM8A1Q9UBU6 413 aa11.89□□□□□ -0.51
SDHD-205ENST00000528048 PYCARDQ9ULZ3 195 aa11.89□□□□□ -0.51
SDHD-205ENST00000528048 TCAF1Q9Y4C2 921 aa11.89□□□□□ -0.51
SDHD-205ENST00000528048 SAR1BQ9Y6B6 198 aa11.89□□□□□ -0.51
SDHD-205ENST00000528048 COLEC10Q9Y6Z7 277 aa11.89□□□□□ -0.51
SDHD-205ENST00000528048 TRBV5-4A0A0C4DH59 114 aa11.88□□□□□ -0.51
SDHD-205ENST00000528048 C17orf113A0A1B0GUU1 675 aa11.88□□□□□ -0.51
SDHD-205ENST00000528048 MAGEB16A2A368 324 aa11.88□□□□□ -0.51
SDHD-205ENST00000528048 AGRPO00253 132 aa11.88□□□□□ -0.51
SDHD-205ENST00000528048 TAF4O00268 1085 aa11.88□□□□□ -0.51
SDHD-205ENST00000528048 IFRD1O00458 451 aaPredicted RBP11.88□□□□□ -0.51
SDHD-205ENST00000528048 PFDN6O15212 129 aa11.88□□□□□ -0.51
SDHD-205ENST00000528048 CASC3O15234 703 aaKnown RBP11.88□□□□□ -0.51
SDHD-205ENST00000528048 GOT2P00505 430 aaKnown RBP11.88□□□□□ -0.51
SDHD-205ENST00000528048 CAPNS1P04632 268 aa11.88□□□□□ -0.51
SDHD-205ENST00000528048 SLC35G4P0C7Q5 338 aa11.88□□□□□ -0.51
SDHD-205ENST00000528048 OR56A5P0C7T3 313 aa11.88□□□□□ -0.51
SDHD-205ENST00000528048 PSMA3P25788 255 aa11.88□□□□□ -0.51
SDHD-205ENST00000528048 MLLT3P42568 568 aaPredicted RBP11.88□□□□□ -0.51
SDHD-205ENST00000528048 ARSDP51689 593 aa11.88□□□□□ -0.51
SDHD-205ENST00000528048 UBE2IP63279 158 aaKnown RBP11.88□□□□□ -0.51
SDHD-205ENST00000528048 ITIH4Q14624 930 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms