RNA–Protein interactions for RNA: ENST00000526058.1

CCS-203, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 4

Gene CCS, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-203ENST00000526058 PRSS56P0CW18 603 aa16.69■□□□□ 0.26
CCS-203ENST00000526058 ITGALP20701 1170 aa16.69■□□□□ 0.26
CCS-203ENST00000526058 FDFT1P37268 417 aa16.69■□□□□ 0.26
CCS-203ENST00000526058 GRIA1P42261 906 aa16.69■□□□□ 0.26
CCS-203ENST00000526058 EPHA4P54764 986 aa16.69■□□□□ 0.26
CCS-203ENST00000526058 DMPKQ09013 629 aa16.69■□□□□ 0.26
CCS-203ENST00000526058 TRA2AQ13595 282 aaKnown RBP eCLIP16.69■□□□□ 0.26
CCS-203ENST00000526058 CCNG2Q16589 344 aa16.69■□□□□ 0.26
CCS-203ENST00000526058 KCTD19Q17RG1 926 aaPredicted RBP16.69■□□□□ 0.26
CCS-203ENST00000526058 LONRF2Q1L5Z9 754 aa16.69■□□□□ 0.26
CCS-203ENST00000526058 SNAP47Q5SQN1 464 aa16.69■□□□□ 0.26
CCS-203ENST00000526058 WDR74Q6RFH5 385 aaPredicted RBP16.69■□□□□ 0.26
CCS-203ENST00000526058 TMEM26Q6ZUK4 368 aa16.69■□□□□ 0.26
CCS-203ENST00000526058 SNX20Q7Z614 316 aa16.69■□□□□ 0.26
CCS-203ENST00000526058 LINC00523Q86TU6 105 aa16.69■□□□□ 0.26
CCS-203ENST00000526058 TRIM48Q8IWZ4 208 aa16.69■□□□□ 0.26
CCS-203ENST00000526058 NXPE1Q8N323 547 aa16.69■□□□□ 0.26
CCS-203ENST00000526058 AVL9Q8NBF6 648 aa16.69■□□□□ 0.26
CCS-203ENST00000526058 ZNF514Q96K75 400 aaPredicted RBP16.69■□□□□ 0.26
CCS-203ENST00000526058 C19orf43Q9BQ61 176 aa16.69■□□□□ 0.26
CCS-203ENST00000526058 DPH1Q9BZG8 443 aa16.69■□□□□ 0.26
CCS-203ENST00000526058 PRORYQ9H606 182 aa16.69■□□□□ 0.26
CCS-203ENST00000526058 FOXJ2Q9P0K8 574 aa16.69■□□□□ 0.26
CCS-203ENST00000526058 AKAP7Q9P0M2 348 aaPredicted RBP16.69■□□□□ 0.26
CCS-203ENST00000526058 PDP2Q9P2J9 529 aa16.69■□□□□ 0.26
CCS-203ENST00000526058 PSMD13Q9UNM6 376 aa16.69■□□□□ 0.26
CCS-203ENST00000526058 SLC30A1Q9Y6M5 507 aa16.69■□□□□ 0.26
CCS-203ENST00000526058 PIKFYVEQ9Y2I7 2098 aa16.69■□□□□ 0.26
CCS-203ENST00000526058 GOLGA6L3A6NEY3 463 aa16.68■□□□□ 0.26
CCS-203ENST00000526058 LILRA5A6NI73 299 aa16.68■□□□□ 0.26
CCS-203ENST00000526058 C9orf172C9J069 976 aa16.68■□□□□ 0.26
CCS-203ENST00000526058 NVLO15381 856 aaKnown RBP16.68■□□□□ 0.26
CCS-203ENST00000526058 FGF3P11487 239 aaPredicted RBP16.68■□□□□ 0.26
CCS-203ENST00000526058 CLN3Q13286 438 aa16.68■□□□□ 0.26
CCS-203ENST00000526058 CCDC38Q502W7 563 aa16.68■□□□□ 0.26
CCS-203ENST00000526058 ZRANB3Q5FWF4 1079 aa16.68■□□□□ 0.26
CCS-203ENST00000526058 XKR5Q6UX68 686 aa16.68■□□□□ 0.26
CCS-203ENST00000526058 CCDC89Q8N998 374 aa16.68■□□□□ 0.26
CCS-203ENST00000526058 PMEPA1Q969W9 287 aa16.68■□□□□ 0.26
CCS-203ENST00000526058 ULK4Q96C45 1275 aa16.68■□□□□ 0.26
CCS-203ENST00000526058 CDKN2AIPNLQ96HQ2 116 aa16.68■□□□□ 0.26
CCS-203ENST00000526058 UCK1Q9HA47 277 aa16.68■□□□□ 0.26
CCS-203ENST00000526058 SLC40A1Q9NP59 571 aa16.68■□□□□ 0.26
CCS-203ENST00000526058 RAB6BQ9NRW1 208 aa16.68■□□□□ 0.26
CCS-203ENST00000526058 POT1Q9NUX5 634 aa16.68■□□□□ 0.26
CCS-203ENST00000526058 OCIAD1Q9NX40 245 aa16.68■□□□□ 0.26
CCS-203ENST00000526058 OGFRQ9NZT2 677 aa16.68■□□□□ 0.26
CCS-203ENST00000526058 FAM8A1Q9UBU6 413 aa16.68■□□□□ 0.26
CCS-203ENST00000526058 KLHL3Q9UH77 587 aa16.68■□□□□ 0.26
CCS-203ENST00000526058 ATMQ13315 3056 aa16.68■□□□□ 0.26
CCS-203ENST00000526058 SDK2Q58EX2 2172 aa16.67■□□□□ 0.26
CCS-203ENST00000526058 MROH6A6NGR9 719 aa16.67■□□□□ 0.26
CCS-203ENST00000526058 ERI2A8K979 691 aaKnown RBP16.67■□□□□ 0.26
CCS-203ENST00000526058 E7EVH7 732 aa16.67■□□□□ 0.26
CCS-203ENST00000526058 H7C0S8 307 aa16.67■□□□□ 0.26
CCS-203ENST00000526058 SUN1O94901 812 aa16.67■□□□□ 0.26
CCS-203ENST00000526058 TYRP1P17643 537 aa16.67■□□□□ 0.26
CCS-203ENST00000526058 CSTF2P33240 577 aaKnown RBP eCLIP16.67■□□□□ 0.26
CCS-203ENST00000526058 RPL22P35268 128 aaKnown RBP16.67■□□□□ 0.26
CCS-203ENST00000526058 KCNJ1P48048 391 aa16.67■□□□□ 0.26
CCS-203ENST00000526058 LMAN1P49257 510 aa16.67■□□□□ 0.26
CCS-203ENST00000526058 ARSDP51689 593 aa16.67■□□□□ 0.26
CCS-203ENST00000526058 CXADRP78310 365 aa16.67■□□□□ 0.26
CCS-203ENST00000526058 CDH17Q12864 832 aa16.67■□□□□ 0.26
CCS-203ENST00000526058 SEMA5AQ13591 1074 aa16.67■□□□□ 0.26
CCS-203ENST00000526058 GPR18Q14330 331 aa16.67■□□□□ 0.26
CCS-203ENST00000526058 BCL7AQ4VC05 210 aa16.67■□□□□ 0.26
CCS-203ENST00000526058 METRNLQ641Q3 311 aa16.67■□□□□ 0.26
CCS-203ENST00000526058 DRICH1Q6PGQ1 229 aaPredicted RBP16.67■□□□□ 0.26
CCS-203ENST00000526058 PPP1R21Q6ZMI0 780 aa16.67■□□□□ 0.26
CCS-203ENST00000526058 ARHGAP22Q7Z5H3 698 aa16.67■□□□□ 0.26
CCS-203ENST00000526058 SERPINA9Q86WD7 417 aa16.67■□□□□ 0.26
CCS-203ENST00000526058 DNAAF3Q8N9W5 541 aa16.67■□□□□ 0.26
CCS-203ENST00000526058 AGBL5Q8NDL9 886 aa16.67■□□□□ 0.26
CCS-203ENST00000526058 STYXQ8WUJ0 223 aa16.67■□□□□ 0.26
CCS-203ENST00000526058 CXorf40BQ96DE9 158 aa16.67■□□□□ 0.26
CCS-203ENST00000526058 DCUN1D1Q96GG9 259 aa16.67■□□□□ 0.26
CCS-203ENST00000526058 FCRL3Q96P31 734 aaPredicted RBP16.67■□□□□ 0.26
CCS-203ENST00000526058 COPS8Q99627 209 aa16.67■□□□□ 0.26
CCS-203ENST00000526058 CPNE5Q9HCH3 593 aa16.67■□□□□ 0.26
CCS-203ENST00000526058 PAK5Q9P286 719 aa16.67■□□□□ 0.26
CCS-203ENST00000526058 DRG1Q9Y295 367 aaKnown RBP16.67■□□□□ 0.26
CCS-203ENST00000526058 SSUH2Q9Y2M2 353 aa16.67■□□□□ 0.26
CCS-203ENST00000526058 TRBV5-4A0A0C4DH59 114 aa16.66■□□□□ 0.26
CCS-203ENST00000526058 MGAT4DA6NG13 374 aa16.66■□□□□ 0.26
CCS-203ENST00000526058 UBXN7O94888 489 aa16.66■□□□□ 0.26
CCS-203ENST00000526058 RALBP11234 206 aa16.66■□□□□ 0.26
CCS-203ENST00000526058 HALP42357 657 aa16.66■□□□□ 0.26
CCS-203ENST00000526058 GFERP55789 205 aa16.66■□□□□ 0.26
CCS-203ENST00000526058 TGIF1Q15583 401 aa16.66■□□□□ 0.26
CCS-203ENST00000526058 RPE65Q16518 533 aa16.66■□□□□ 0.26
CCS-203ENST00000526058 GPR33Q49SQ1 333 aa16.66■□□□□ 0.26
CCS-203ENST00000526058 BROXQ5VW32 411 aa16.66■□□□□ 0.26
CCS-203ENST00000526058 TAS2R42Q7RTR8 314 aa16.66■□□□□ 0.26
CCS-203ENST00000526058 ZFAND4Q86XD8 727 aa16.66■□□□□ 0.26
CCS-203ENST00000526058 PIANPQ8IYJ0 282 aa16.66■□□□□ 0.26
CCS-203ENST00000526058 LILRA3Q8N6C8 439 aaPredicted RBP16.66■□□□□ 0.26
CCS-203ENST00000526058 GPR150Q8NGU9 434 aa16.66■□□□□ 0.26
CCS-203ENST00000526058 OR2L2Q8NH16 312 aa16.66■□□□□ 0.26
CCS-203ENST00000526058 MAIP1Q8WWC4 291 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms