RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 PILRAQ9UKJ1 303 aa7.01□□□□□ -1.29
NEDD8-203ENST00000524927 ADAM21Q9UKJ8 722 aa7.01□□□□□ -1.29
NEDD8-203ENST00000524927 TNRC6AQ8NDV7 1962 aaKnown RBP7□□□□□ -1.29
NEDD8-203ENST00000524927 VPS13CQ709C8 3753 aa7□□□□□ -1.29
NEDD8-203ENST00000524927 A0A087WWL8 130 aa7□□□□□ -1.29
NEDD8-203ENST00000524927 A0A0G2JK05 382 aa7□□□□□ -1.29
NEDD8-203ENST00000524927 MBD3L4A6NDZ8 208 aaPredicted RBP7□□□□□ -1.29
NEDD8-203ENST00000524927 MBD3L3A6NE82 208 aaPredicted RBP7□□□□□ -1.29
NEDD8-203ENST00000524927 INPP4BO15327 924 aa7□□□□□ -1.29
NEDD8-203ENST00000524927 CCL4P13236 92 aa7□□□□□ -1.29
NEDD8-203ENST00000524927 TNFRSF1AP19438 455 aa7□□□□□ -1.29
NEDD8-203ENST00000524927 SLC8A1P32418 973 aa7□□□□□ -1.29
NEDD8-203ENST00000524927 RABIFP47224 123 aa7□□□□□ -1.29
NEDD8-203ENST00000524927 CARSP49589 748 aaKnown RBP7□□□□□ -1.29
NEDD8-203ENST00000524927 MAN2A2P49641 1150 aa7□□□□□ -1.29
NEDD8-203ENST00000524927 GOLGA8FQ08AF8 430 aa7□□□□□ -1.29
NEDD8-203ENST00000524927 GOLGA8DPQ0D2H9 430 aa7□□□□□ -1.29
NEDD8-203ENST00000524927 C16orf72Q14CZ0 275 aa7□□□□□ -1.29
NEDD8-203ENST00000524927 ZNF542PQ5EBM4 170 aa7□□□□□ -1.29
NEDD8-203ENST00000524927 HIST2H2BDQ6DRA6 164 aa7□□□□□ -1.29
NEDD8-203ENST00000524927 NCAPH2Q6IBW4 605 aa7□□□□□ -1.29
NEDD8-203ENST00000524927 BEND5Q7L4P6 421 aa7□□□□□ -1.29
NEDD8-203ENST00000524927 RAB11FIP4Q86YS3 637 aa7□□□□□ -1.29
NEDD8-203ENST00000524927 CFAP52Q8N1V2 620 aa7□□□□□ -1.29
NEDD8-203ENST00000524927 CCDC112Q8NEF3 446 aa7□□□□□ -1.29
NEDD8-203ENST00000524927 OR56A3Q8NH54 315 aa7□□□□□ -1.29
NEDD8-203ENST00000524927 IPCEF1Q8WWN9 437 aaPredicted RBP7□□□□□ -1.29
NEDD8-203ENST00000524927 ZNF566Q969W8 418 aa7□□□□□ -1.29
NEDD8-203ENST00000524927 FEM1CQ96JP0 617 aa7□□□□□ -1.29
NEDD8-203ENST00000524927 NACA2Q9H009 215 aa7□□□□□ -1.29
NEDD8-203ENST00000524927 TBC1D23Q9NUY8 699 aa7□□□□□ -1.29
NEDD8-203ENST00000524927 DDX43Q9NXZ2 648 aaKnown RBP7□□□□□ -1.29
NEDD8-203ENST00000524927 OSGIN2Q9Y236 505 aa7□□□□□ -1.29
NEDD8-203ENST00000524927 HIVEP2P31629 2446 aa7□□□□□ -1.29
NEDD8-203ENST00000524927 UNC13CQ8NB66 2214 aa7□□□□□ -1.29
NEDD8-203ENST00000524927 LACTBL1A8MY62 500 aa6.99□□□□□ -1.29
NEDD8-203ENST00000524927 KPNA7A9QM74 516 aa6.99□□□□□ -1.29
NEDD8-203ENST00000524927 SLC37A4O43826 429 aa6.99□□□□□ -1.29
NEDD8-203ENST00000524927 TOM1L1O75674 476 aa6.99□□□□□ -1.29
NEDD8-203ENST00000524927 ADRB2P07550 413 aa6.99□□□□□ -1.29
NEDD8-203ENST00000524927 NFKBIAP25963 317 aa6.99□□□□□ -1.29
NEDD8-203ENST00000524927 PCSK6P29122 969 aa6.99□□□□□ -1.29
NEDD8-203ENST00000524927 MAT2AP31153 395 aaKnown RBP6.99□□□□□ -1.29
NEDD8-203ENST00000524927 APOBEC3AP31941 199 aaPredicted RBP6.99□□□□□ -1.29
NEDD8-203ENST00000524927 FOXM1Q08050 763 aa6.99□□□□□ -1.29
NEDD8-203ENST00000524927 POM121L1PQ3SYA9 428 aa6.99□□□□□ -1.29
NEDD8-203ENST00000524927 ERAP2Q6P179 960 aa6.99□□□□□ -1.29
NEDD8-203ENST00000524927 FAM171BQ6P995 826 aa6.99□□□□□ -1.29
NEDD8-203ENST00000524927 FOXR2Q6PJQ5 311 aa6.99□□□□□ -1.29
NEDD8-203ENST00000524927 Q6ZRM9 215 aa6.99□□□□□ -1.29
NEDD8-203ENST00000524927 RHOT2Q8IXI1 618 aa6.99□□□□□ -1.29
NEDD8-203ENST00000524927 SLC22A18ASQ8N1D0 253 aa6.99□□□□□ -1.29
NEDD8-203ENST00000524927 AADATQ8N5Z0 425 aa6.99□□□□□ -1.29
NEDD8-203ENST00000524927 OR6C4Q8NGE1 309 aa6.99□□□□□ -1.29
NEDD8-203ENST00000524927 Q8TCH9 128 aa6.99□□□□□ -1.29
NEDD8-203ENST00000524927 WFIKKN2Q8TEU8 576 aa6.99□□□□□ -1.29
NEDD8-203ENST00000524927 SPSB4Q96A44 273 aa6.99□□□□□ -1.29
NEDD8-203ENST00000524927 FAM131CQ96AQ9 280 aa6.99□□□□□ -1.29
NEDD8-203ENST00000524927 MOGAT1Q96PD6 335 aa6.99□□□□□ -1.29
NEDD8-203ENST00000524927 TRIB1Q96RU8 372 aa6.99□□□□□ -1.29
NEDD8-203ENST00000524927 RBM15Q96T37 977 aaKnown RBP eCLIP6.99□□□□□ -1.298e-6■□□□□ 8.4
NEDD8-203ENST00000524927 EIF2AK1Q9BQI3 630 aaKnown RBP6.99□□□□□ -1.29
NEDD8-203ENST00000524927 SPATA5L1Q9BVQ7 753 aa6.99□□□□□ -1.29
NEDD8-203ENST00000524927 KRTAP3-1Q9BYR8 98 aa6.99□□□□□ -1.29
NEDD8-203ENST00000524927 DCLK3Q9C098 648 aa6.99□□□□□ -1.29
NEDD8-203ENST00000524927 TTYH3Q9C0H2 523 aa6.99□□□□□ -1.29
NEDD8-203ENST00000524927 CHST8Q9H2A9 424 aa6.99□□□□□ -1.29
NEDD8-203ENST00000524927 MRPS18AQ9NVS2 196 aaKnown RBP6.99□□□□□ -1.29
NEDD8-203ENST00000524927 MYO1AQ9UBC5 1043 aa6.99□□□□□ -1.29
NEDD8-203ENST00000524927 ZNF212Q9UDV6 495 aa6.99□□□□□ -1.29
NEDD8-203ENST00000524927 CA5BQ9Y2D0 317 aa6.99□□□□□ -1.29
NEDD8-203ENST00000524927 RNF215Q9Y6U7 377 aa6.99□□□□□ -1.29
NEDD8-203ENST00000524927 FRMD3A2A2Y4 597 aa6.98□□□□□ -1.29
NEDD8-203ENST00000524927 LMO7DNF2Z398 122 aa6.98□□□□□ -1.29
NEDD8-203ENST00000524927 SLC7A4O43246 635 aa6.98□□□□□ -1.29
NEDD8-203ENST00000524927 MSI1O43347 362 aaKnown RBP6.98□□□□□ -1.29
NEDD8-203ENST00000524927 ERN1O75460 977 aaKnown RBP6.98□□□□□ -1.29
NEDD8-203ENST00000524927 STSP08842 583 aa6.98□□□□□ -1.29
NEDD8-203ENST00000524927 FGF3P11487 239 aaPredicted RBP6.98□□□□□ -1.29
NEDD8-203ENST00000524927 CYP11B2P19099 503 aa6.98□□□□□ -1.29
NEDD8-203ENST00000524927 CHRM3P20309 590 aa6.98□□□□□ -1.29
NEDD8-203ENST00000524927 ACAT1P24752 427 aaKnown RBP6.98□□□□□ -1.29
NEDD8-203ENST00000524927 YWHAQP27348 245 aa6.98□□□□□ -1.29
NEDD8-203ENST00000524927 CHKAP35790 457 aa6.98□□□□□ -1.29
NEDD8-203ENST00000524927 HSPA7P48741 367 aa6.98□□□□□ -1.29
NEDD8-203ENST00000524927 KRT72Q14CN4 511 aa6.98□□□□□ -1.29
NEDD8-203ENST00000524927 KYAT1Q16773 422 aa6.98□□□□□ -1.29
NEDD8-203ENST00000524927 FAM102AQ5T9C2 384 aaPredicted RBP6.98□□□□□ -1.29
NEDD8-203ENST00000524927 AGAP9Q5VTM2 703 aa6.98□□□□□ -1.29
NEDD8-203ENST00000524927 RRAGBQ5VZM2 374 aa6.98□□□□□ -1.29
NEDD8-203ENST00000524927 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.98□□□□□ -1.29
NEDD8-203ENST00000524927 ZNF517Q6ZMY9 492 aaPredicted RBP6.98□□□□□ -1.29
NEDD8-203ENST00000524927 SYNE3Q6ZMZ3 975 aa6.98□□□□□ -1.29
NEDD8-203ENST00000524927 ABI3BPQ7Z7G0 1075 aa6.98□□□□□ -1.29
NEDD8-203ENST00000524927 MRGPRGQ86SM5 289 aa6.98□□□□□ -1.29
NEDD8-203ENST00000524927 FJX1Q86VR8 437 aa6.98□□□□□ -1.29
NEDD8-203ENST00000524927 PARGQ86W56 976 aa6.98□□□□□ -1.29
NEDD8-203ENST00000524927 MMAAQ8IVH4 418 aaKnown RBP6.98□□□□□ -1.29
NEDD8-203ENST00000524927 CEP97Q8IW35 865 aa6.98□□□□□ -1.29
NEDD8-203ENST00000524927 CD302Q8IX05 232 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms