RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 PIM3Q86V86 326 aa6.34□□□□□ -1.39
VPS13B-211ENST00000522802 GKN2Q86XP6 184 aa6.34□□□□□ -1.39
VPS13B-211ENST00000522802 REXO1L1PQ8IX06 675 aa6.34□□□□□ -1.39
VPS13B-211ENST00000522802 CCDC13Q8IYE1 715 aa6.34□□□□□ -1.39
VPS13B-211ENST00000522802 FAM186BQ8IYM0 893 aa6.34□□□□□ -1.39
VPS13B-211ENST00000522802 TTC39CQ8N584 583 aa6.34□□□□□ -1.39
VPS13B-211ENST00000522802 FBXL13Q8NEE6 735 aa6.34□□□□□ -1.39
VPS13B-211ENST00000522802 NLGN4YQ8NFZ3 816 aaPredicted RBP6.34□□□□□ -1.39
VPS13B-211ENST00000522802 OR7D4Q8NG98 312 aa6.34□□□□□ -1.39
VPS13B-211ENST00000522802 CCL4L1Q8NHW4 92 aa6.34□□□□□ -1.39
VPS13B-211ENST00000522802 ASB12Q8WXK4 309 aa6.34□□□□□ -1.39
VPS13B-211ENST00000522802 FUBP1Q96AE4 644 aaKnown RBP6.34□□□□□ -1.39
VPS13B-211ENST00000522802 KIAA1143Q96AT1 154 aaPredicted RBP6.34□□□□□ -1.39
VPS13B-211ENST00000522802 RBM15Q96T37 977 aaKnown RBP eCLIP6.34□□□□□ -1.39
VPS13B-211ENST00000522802 CTRCQ99895 268 aa6.34□□□□□ -1.39
VPS13B-211ENST00000522802 TM6SF2Q9BZW4 377 aa6.34□□□□□ -1.39
VPS13B-211ENST00000522802 FAM204AQ9H8W3 233 aa6.34□□□□□ -1.39
VPS13B-211ENST00000522802 ANLNQ9NQW6 1124 aa6.34□□□□□ -1.39
VPS13B-211ENST00000522802 OCIAD1Q9NX40 245 aa6.34□□□□□ -1.39
VPS13B-211ENST00000522802 RAB20Q9NX57 234 aa6.34□□□□□ -1.39
VPS13B-211ENST00000522802 AKAP7Q9P0M2 348 aaPredicted RBP6.34□□□□□ -1.39
VPS13B-211ENST00000522802 COX16Q9P0S2 106 aa6.34□□□□□ -1.39
VPS13B-211ENST00000522802 LUZP4Q9P127 313 aa6.34□□□□□ -1.39
VPS13B-211ENST00000522802 RCOR3Q9P2K3 495 aaPredicted RBP6.34□□□□□ -1.39
VPS13B-211ENST00000522802 DKK3Q9UBP4 350 aa6.34□□□□□ -1.39
VPS13B-211ENST00000522802 KLQ9UEF7 1012 aa6.34□□□□□ -1.39
VPS13B-211ENST00000522802 Q9UFV3 132 aa6.34□□□□□ -1.39
VPS13B-211ENST00000522802 OR1A2Q9Y585 309 aa6.34□□□□□ -1.39
VPS13B-211ENST00000522802 SNX10Q9Y5X0 201 aa6.34□□□□□ -1.39
VPS13B-211ENST00000522802 HS3ST4Q9Y661 456 aa6.34□□□□□ -1.39
VPS13B-211ENST00000522802 MORC2Q9Y6X9 1032 aaPredicted RBP6.34□□□□□ -1.39
VPS13B-211ENST00000522802 PVALEFA0A1B0GWK0 134 aa6.33□□□□□ -1.4
VPS13B-211ENST00000522802 ARHGAP10A1A4S6 786 aa6.33□□□□□ -1.4
VPS13B-211ENST00000522802 C16orf96A6NNT2 1141 aa6.33□□□□□ -1.4
VPS13B-211ENST00000522802 I6L893 689 aaPredicted RBP6.33□□□□□ -1.4
VPS13B-211ENST00000522802 AREL1O15033 823 aa6.33□□□□□ -1.4
VPS13B-211ENST00000522802 MAPK13O15264 365 aa6.33□□□□□ -1.4
VPS13B-211ENST00000522802 NUDT21O43809 227 aaKnown RBP6.33□□□□□ -1.4
VPS13B-211ENST00000522802 EIF5BO60841 1220 aaKnown RBP6.33□□□□□ -1.4
VPS13B-211ENST00000522802 RFPL1O75677 317 aa6.33□□□□□ -1.4
VPS13B-211ENST00000522802 ADCY5O95622 1261 aa6.33□□□□□ -1.4
VPS13B-211ENST00000522802 THRAP10827 490 aa6.33□□□□□ -1.4
VPS13B-211ENST00000522802 VDRP11473 427 aa6.33□□□□□ -1.4
VPS13B-211ENST00000522802 KRT13P13646 458 aa6.33□□□□□ -1.4
VPS13B-211ENST00000522802 TCN2P20062 427 aa6.33□□□□□ -1.4
VPS13B-211ENST00000522802 CDK11BP21127 795 aaKnown RBP6.33□□□□□ -1.4
VPS13B-211ENST00000522802 F8A1P23610 371 aa6.33□□□□□ -1.4
VPS13B-211ENST00000522802 ALDH4A1P30038 563 aa6.33□□□□□ -1.4
VPS13B-211ENST00000522802 ADCY8P40145 1251 aa6.33□□□□□ -1.4
VPS13B-211ENST00000522802 ETV4P43268 484 aa6.33□□□□□ -1.4
VPS13B-211ENST00000522802 SERPINH1P50454 418 aaKnown RBP6.33□□□□□ -1.4
VPS13B-211ENST00000522802 DNA2P51530 1060 aa6.33□□□□□ -1.4
VPS13B-211ENST00000522802 KRT83P78385 493 aa6.33□□□□□ -1.4
VPS13B-211ENST00000522802 ARF5P84085 180 aa6.33□□□□□ -1.4
VPS13B-211ENST00000522802 TMPRSS15P98073 1019 aa6.33□□□□□ -1.4
VPS13B-211ENST00000522802 FAPQ12884 760 aa6.33□□□□□ -1.4
VPS13B-211ENST00000522802 ARHGEF7Q14155 803 aa6.33□□□□□ -1.4
VPS13B-211ENST00000522802 NFATC4Q14934 902 aa6.33□□□□□ -1.4
VPS13B-211ENST00000522802 TAF5Q15542 800 aa6.33□□□□□ -1.4
VPS13B-211ENST00000522802 KLHL40Q2TBA0 621 aa6.33□□□□□ -1.4
VPS13B-211ENST00000522802 OTUD1Q5VV17 481 aaPredicted RBP6.33□□□□□ -1.4
VPS13B-211ENST00000522802 NKAIN2Q5VXU1 208 aa6.33□□□□□ -1.4
VPS13B-211ENST00000522802 ENPP7Q6UWV6 458 aa6.33□□□□□ -1.4
VPS13B-211ENST00000522802 ESPNLQ6ZVH7 1005 aa6.33□□□□□ -1.4
VPS13B-211ENST00000522802 ZSCAN30Q86W11 494 aa6.33□□□□□ -1.4
VPS13B-211ENST00000522802 ZNF683Q8IZ20 524 aa6.33□□□□□ -1.4
VPS13B-211ENST00000522802 NRSN1Q8IZ57 195 aa6.33□□□□□ -1.4
VPS13B-211ENST00000522802 BMPERQ8N8U9 685 aa6.33□□□□□ -1.4
VPS13B-211ENST00000522802 ATP6V0D2Q8N8Y2 350 aa6.33□□□□□ -1.4
VPS13B-211ENST00000522802 IQUBQ8NA54 791 aa6.33□□□□□ -1.4
VPS13B-211ENST00000522802 FAM46DQ8NEK8 389 aa6.33□□□□□ -1.4
VPS13B-211ENST00000522802 OR6C4Q8NGE1 309 aa6.33□□□□□ -1.4
VPS13B-211ENST00000522802 OR1E3Q8WZA6 343 aa6.33□□□□□ -1.4
VPS13B-211ENST00000522802 RTP4Q96DX8 246 aa6.33□□□□□ -1.4
VPS13B-211ENST00000522802 FAXDC2Q96IV6 333 aa6.33□□□□□ -1.4
VPS13B-211ENST00000522802 HEPHQ9BQS7 1158 aa6.33□□□□□ -1.4
VPS13B-211ENST00000522802 KRTAP17-1Q9BYP8 105 aa6.33□□□□□ -1.4
VPS13B-211ENST00000522802 KRTAP9-3Q9BYQ3 159 aa6.33□□□□□ -1.4
VPS13B-211ENST00000522802 SPRY4Q9C004 299 aa6.33□□□□□ -1.4
VPS13B-211ENST00000522802 UNKQ9C0B0 810 aaKnown RBP6.33□□□□□ -1.4
VPS13B-211ENST00000522802 PITHD1Q9GZP4 211 aaPredicted RBP6.33□□□□□ -1.4
VPS13B-211ENST00000522802 FGF22Q9HCT0 170 aa6.33□□□□□ -1.4
VPS13B-211ENST00000522802 MRPL40Q9NQ50 206 aaKnown RBP6.33□□□□□ -1.4
VPS13B-211ENST00000522802 EXOC1Q9NV70 894 aa6.33□□□□□ -1.4
VPS13B-211ENST00000522802 DDIT4Q9NX09 232 aa6.33□□□□□ -1.4
VPS13B-211ENST00000522802 SLC39A1Q9NY26 324 aa6.33□□□□□ -1.4
VPS13B-211ENST00000522802 KCMF1Q9P0J7 381 aa6.33□□□□□ -1.4
VPS13B-211ENST00000522802 TLK1Q9UKI8 766 aa6.33□□□□□ -1.4
VPS13B-211ENST00000522802 TRAF3IP3Q9Y228 551 aa6.33□□□□□ -1.4
VPS13B-211ENST00000522802 NIPBLQ6KC79 2804 aaeCLIP6.33□□□□□ -1.4
VPS13B-211ENST00000522802 SPG11Q96JI7 2443 aa6.33□□□□□ -1.4
VPS13B-211ENST00000522802 PCSK5Q92824 1860 aa6.32□□□□□ -1.4
VPS13B-211ENST00000522802 TMEM202A6NGA9 273 aa6.32□□□□□ -1.4
VPS13B-211ENST00000522802 E5RJQ4 531 aa6.32□□□□□ -1.4
VPS13B-211ENST00000522802 POLR2DO15514 142 aaKnown RBP6.32□□□□□ -1.4
VPS13B-211ENST00000522802 CLDN11O75508 207 aa6.32□□□□□ -1.4
VPS13B-211ENST00000522802 ZMPSTE24O75844 475 aa6.32□□□□□ -1.4
VPS13B-211ENST00000522802 STK17BO94768 372 aa6.32□□□□□ -1.4
VPS13B-211ENST00000522802 PCCBP05166 539 aa6.32□□□□□ -1.4
VPS13B-211ENST00000522802 UGT2B4P06133 528 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms