RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 STK32CQ86UX6 486 aa10.03□□□□□ -0.8
MCF2-209ENST00000520602 TEX26Q8N6G2 289 aa10.03□□□□□ -0.8
MCF2-209ENST00000520602 MIPOL1Q8TD10 442 aa10.03□□□□□ -0.8
MCF2-209ENST00000520602 ISL2Q96A47 359 aa10.03□□□□□ -0.8
MCF2-209ENST00000520602 PKP2Q99959 881 aa10.03□□□□□ -0.8
MCF2-209ENST00000520602 CERS4Q9HA82 394 aa10.03□□□□□ -0.8
MCF2-209ENST00000520602 ARHGAP10A1A4S6 786 aa10.03□□□□□ -0.8
MCF2-209ENST00000520602 CCDC189A1A4V9 331 aa10.03□□□□□ -0.8
MCF2-209ENST00000520602 LEFTY2O00292 366 aa10.03□□□□□ -0.8
MCF2-209ENST00000520602 PGLSO95336 258 aa10.03□□□□□ -0.8
MCF2-209ENST00000520602 GSNP06396 782 aa10.03□□□□□ -0.8
MCF2-209ENST00000520602 ARF5P84085 180 aa10.03□□□□□ -0.8
MCF2-209ENST00000520602 LIPEQ05469 1076 aa10.03□□□□□ -0.8
MCF2-209ENST00000520602 TUBB3Q13509 450 aa10.03□□□□□ -0.8
MCF2-209ENST00000520602 C18orf21Q32NC0 220 aaPredicted RBP10.03□□□□□ -0.8
MCF2-209ENST00000520602 FAM219BQ5XKK7 198 aa10.03□□□□□ -0.8
MCF2-209ENST00000520602 LRRC66Q68CR7 880 aa10.03□□□□□ -0.8
MCF2-209ENST00000520602 DOK6Q6PKX4 331 aa10.03□□□□□ -0.8
MCF2-209ENST00000520602 METTL3Q86U44 580 aaKnown RBP10.03□□□□□ -0.8
MCF2-209ENST00000520602 KLHL23Q8NBE8 558 aa10.03□□□□□ -0.8
MCF2-209ENST00000520602 OR52B6Q8NGF0 335 aa10.03□□□□□ -0.8
MCF2-209ENST00000520602 ITFG1Q8TB96 612 aa10.03□□□□□ -0.8
MCF2-209ENST00000520602 PEX13Q92968 403 aa10.03□□□□□ -0.8
MCF2-209ENST00000520602 SLC45A3Q96JT2 553 aa10.03□□□□□ -0.8
MCF2-209ENST00000520602 TUBGCP5Q96RT8 1024 aa10.03□□□□□ -0.8
MCF2-209ENST00000520602 ASPSCR1Q9BZE9 553 aa10.03□□□□□ -0.8
MCF2-209ENST00000520602 KCTD5Q9NXV2 234 aa10.03□□□□□ -0.8
MCF2-209ENST00000520602 ANAPC2Q9UJX6 822 aa10.03□□□□□ -0.8
MCF2-209ENST00000520602 INVSQ9Y283 1065 aa10.03□□□□□ -0.8
MCF2-209ENST00000520602 GON4LQ3T8J9 2241 aa10.03□□□□□ -0.8
MCF2-209ENST00000520602 C15orf38-AP3S2A0A0A6YYH1 394 aa10.02□□□□□ -0.8
MCF2-209ENST00000520602 RFPL2O75678 378 aa10.02□□□□□ -0.8
MCF2-209ENST00000520602 MTHFD1P11586 935 aaKnown RBP10.02□□□□□ -0.8
MCF2-209ENST00000520602 CD70P32970 193 aa10.02□□□□□ -0.8
MCF2-209ENST00000520602 DGKQP52824 942 aa10.02□□□□□ -0.8
MCF2-209ENST00000520602 MS4A2Q01362 244 aa10.02□□□□□ -0.8
MCF2-209ENST00000520602 RAB33AQ14088 237 aa10.02□□□□□ -0.8
MCF2-209ENST00000520602 ZIK1Q3SY52 487 aaPredicted RBP10.02□□□□□ -0.8
MCF2-209ENST00000520602 LRRC23Q53EV4 343 aaPredicted RBP10.02□□□□□ -0.8
MCF2-209ENST00000520602 INO80DQ53TQ3 878 aaPredicted RBP10.02□□□□□ -0.8
MCF2-209ENST00000520602 TMEM207Q6UWW9 146 aa10.02□□□□□ -0.8
MCF2-209ENST00000520602 NECAB2Q7Z6G3 386 aa10.02□□□□□ -0.8
MCF2-209ENST00000520602 ARPINQ7Z6K5 226 aa10.02□□□□□ -0.8
MCF2-209ENST00000520602 CANT1Q8WVQ1 401 aa10.02□□□□□ -0.8
MCF2-209ENST00000520602 KCNJ9Q92806 393 aa10.02□□□□□ -0.8
MCF2-209ENST00000520602 C3orf30Q96M34 536 aa10.02□□□□□ -0.8
MCF2-209ENST00000520602 GPR78Q96P69 363 aa10.02□□□□□ -0.8
MCF2-209ENST00000520602 WRAP53Q9BUR4 548 aaKnown RBP10.02□□□□□ -0.8
MCF2-209ENST00000520602 FAM83DQ9H4H8 585 aa10.02□□□□□ -0.8
MCF2-209ENST00000520602 IGFLR1Q9H665 355 aa10.02□□□□□ -0.8
MCF2-209ENST00000520602 SH3BP4Q9P0V3 963 aa10.02□□□□□ -0.8
MCF2-209ENST00000520602 WNT6Q9Y6F9 365 aa10.02□□□□□ -0.8
MCF2-209ENST00000520602 KNL1Q8NG31 2342 aa10.02□□□□□ -0.81
MCF2-209ENST00000520602 TBC1D3BA6NDS4 549 aa10.02□□□□□ -0.81
MCF2-209ENST00000520602 BBIP1A8MTZ0 92 aa10.02□□□□□ -0.81
MCF2-209ENST00000520602 PER2O15055 1255 aa10.02□□□□□ -0.81
MCF2-209ENST00000520602 TGM5O43548 720 aa10.02□□□□□ -0.81
MCF2-209ENST00000520602 CACNG3O60359 315 aa10.02□□□□□ -0.81
MCF2-209ENST00000520602 ABCB1P08183 1280 aaPredicted RBP10.02□□□□□ -0.81
MCF2-209ENST00000520602 ETS2P15036 469 aa10.02□□□□□ -0.81
MCF2-209ENST00000520602 PRDX3P30048 256 aaKnown RBP10.02□□□□□ -0.81
MCF2-209ENST00000520602 MAD2L1Q13257 205 aaPredicted RBP10.02□□□□□ -0.81
MCF2-209ENST00000520602 RABL3Q5HYI8 236 aa10.02□□□□□ -0.81
MCF2-209ENST00000520602 LYPLAL1Q5VWZ2 237 aa10.02□□□□□ -0.81
MCF2-209ENST00000520602 NCEH1Q6PIU2 408 aa10.02□□□□□ -0.81
MCF2-209ENST00000520602 ZNF621Q6ZSS3 439 aa10.02□□□□□ -0.81
MCF2-209ENST00000520602 SYVN1Q86TM6 617 aa10.02□□□□□ -0.81
MCF2-209ENST00000520602 TSPAN33Q86UF1 283 aa10.02□□□□□ -0.81
MCF2-209ENST00000520602 ADCY4Q8NFM4 1077 aa10.02□□□□□ -0.81
MCF2-209ENST00000520602 OR4F6Q8NGB9 312 aa10.02□□□□□ -0.81
MCF2-209ENST00000520602 OR2T34Q8NGX1 318 aa10.02□□□□□ -0.81
MCF2-209ENST00000520602 OR2T3Q8NH03 318 aa10.02□□□□□ -0.81
MCF2-209ENST00000520602 UBXN10Q96LJ8 280 aa10.02□□□□□ -0.81
MCF2-209ENST00000520602 OR52E6Q96RD3 313 aa10.02□□□□□ -0.81
MCF2-209ENST00000520602 KLF16Q9BXK1 252 aaPredicted RBP10.02□□□□□ -0.81
MCF2-209ENST00000520602 MEAF6Q9HAF1 191 aa10.02□□□□□ -0.81
MCF2-209ENST00000520602 ASB3Q9Y575 518 aa10.02□□□□□ -0.81
MCF2-209ENST00000520602 SBF1O95248 1867 aa10.02□□□□□ -0.81
MCF2-209ENST00000520602 A0A1W2PQ67 120 aa10.02□□□□□ -0.81
MCF2-209ENST00000520602 CLOCKO15516 846 aa10.02□□□□□ -0.81
MCF2-209ENST00000520602 KIF1CO43896 1103 aaKnown RBP10.02□□□□□ -0.81
MCF2-209ENST00000520602 KCNH1O95259 989 aa10.02□□□□□ -0.81
MCF2-209ENST00000520602 TNFAIP8O95379 198 aa10.02□□□□□ -0.81
MCF2-209ENST00000520602 PABPC1P11940 636 aaKnown RBP10.02□□□□□ -0.81
MCF2-209ENST00000520602 ALOX15P16050 662 aaPredicted RBP10.02□□□□□ -0.81
MCF2-209ENST00000520602 NSG1P42857 185 aa10.02□□□□□ -0.81
MCF2-209ENST00000520602 GNPDA1P46926 289 aa10.02□□□□□ -0.81
MCF2-209ENST00000520602 VAC14Q08AM6 782 aa10.02□□□□□ -0.81
MCF2-209ENST00000520602 ADGRE1Q14246 886 aa10.02□□□□□ -0.81
MCF2-209ENST00000520602 TEAD2Q15562 447 aa10.02□□□□□ -0.81
MCF2-209ENST00000520602 MYLK3Q32MK0 819 aa10.02□□□□□ -0.81
MCF2-209ENST00000520602 TTC30BQ8N4P2 665 aa10.02□□□□□ -0.81
MCF2-209ENST00000520602 MYLIPQ8WY64 445 aa10.02□□□□□ -0.81
MCF2-209ENST00000520602 FUBP1Q96AE4 644 aaKnown RBP10.02□□□□□ -0.81
MCF2-209ENST00000520602 APOLD1Q96LR9 279 aa10.02□□□□□ -0.81
MCF2-209ENST00000520602 TMEM74Q96NL1 305 aa10.02□□□□□ -0.81
MCF2-209ENST00000520602 COQ10BQ9H8M1 238 aa10.02□□□□□ -0.81
MCF2-209ENST00000520602 ZNF334Q9HCZ1 680 aaPredicted RBP10.02□□□□□ -0.81
MCF2-209ENST00000520602 PAPOLBQ9NRJ5 636 aaKnown RBP10.02□□□□□ -0.81
MCF2-209ENST00000520602 TMCO1Q9UM00 188 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms