RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 VCLP18206 1134 aa13.04□□□□□ -0.32
RNF4-215ENST00000511843 XRCC1P18887 633 aaPredicted RBP13.04□□□□□ -0.32
RNF4-215ENST00000511843 ITGALP20701 1170 aa13.04□□□□□ -0.32
RNF4-215ENST00000511843 MC4RP32245 332 aa13.04□□□□□ -0.32
RNF4-215ENST00000511843 MLLT3P42568 568 aaPredicted RBP13.04□□□□□ -0.32
RNF4-215ENST00000511843 KCNJ1P48048 391 aa13.04□□□□□ -0.32
RNF4-215ENST00000511843 ARSDP51689 593 aa13.04□□□□□ -0.32
RNF4-215ENST00000511843 SQSTM1Q13501 440 aa13.04□□□□□ -0.32
RNF4-215ENST00000511843 GPR18Q14330 331 aa13.04□□□□□ -0.32
RNF4-215ENST00000511843 LONRF2Q1L5Z9 754 aa13.04□□□□□ -0.32
RNF4-215ENST00000511843 ZRANB3Q5FWF4 1079 aa13.04□□□□□ -0.32
RNF4-215ENST00000511843 DUS1LQ6P1R4 473 aaKnown RBP13.04□□□□□ -0.32
RNF4-215ENST00000511843 ABRAXAS1Q6UWZ7 409 aa13.04□□□□□ -0.32
RNF4-215ENST00000511843 XKR5Q6UX68 686 aa13.04□□□□□ -0.32
RNF4-215ENST00000511843 TMEM26Q6ZUK4 368 aa13.04□□□□□ -0.32
RNF4-215ENST00000511843 FAM129CQ86XR2 697 aa13.04□□□□□ -0.32
RNF4-215ENST00000511843 NXPE1Q8N323 547 aa13.04□□□□□ -0.32
RNF4-215ENST00000511843 LILRA3Q8N6C8 439 aaPredicted RBP13.04□□□□□ -0.32
RNF4-215ENST00000511843 ART4Q93070 314 aa13.04□□□□□ -0.32
RNF4-215ENST00000511843 SH3KBP1Q96B97 665 aa13.04□□□□□ -0.32
RNF4-215ENST00000511843 LRRC45Q96CN5 670 aa13.04□□□□□ -0.32
RNF4-215ENST00000511843 CXorf40BQ96DE9 158 aa13.04□□□□□ -0.32
RNF4-215ENST00000511843 RNF31Q96EP0 1072 aa13.04□□□□□ -0.32
RNF4-215ENST00000511843 BBC3Q96PG8 261 aaPredicted RBP13.04□□□□□ -0.32
RNF4-215ENST00000511843 RAB6BQ9NRW1 208 aa13.04□□□□□ -0.32
RNF4-215ENST00000511843 NLE1Q9NVX2 485 aaPredicted RBP13.04□□□□□ -0.32
RNF4-215ENST00000511843 PCDHGA7Q9Y5G6 932 aa13.04□□□□□ -0.32
RNF4-215ENST00000511843 ATMQ13315 3056 aa13.03□□□□□ -0.32
RNF4-215ENST00000511843 LILRA5A6NI73 299 aa13.03□□□□□ -0.32
RNF4-215ENST00000511843 EFCAB7A8K855 629 aa13.03□□□□□ -0.32
RNF4-215ENST00000511843 AGAP14A8MT82 685 aa13.03□□□□□ -0.32
RNF4-215ENST00000511843 E7EVH7 732 aa13.03□□□□□ -0.32
RNF4-215ENST00000511843 HGSO14964 777 aaPredicted RBP13.03□□□□□ -0.32
RNF4-215ENST00000511843 NVLO15381 856 aaKnown RBP13.03□□□□□ -0.32
RNF4-215ENST00000511843 PSMD3O43242 534 aa13.03□□□□□ -0.32
RNF4-215ENST00000511843 STIP1P31948 543 aaKnown RBP13.03□□□□□ -0.32
RNF4-215ENST00000511843 CSTF2P33240 577 aaKnown RBP eCLIP13.03□□□□□ -0.32
RNF4-215ENST00000511843 RPL22P35268 128 aaKnown RBP13.03□□□□□ -0.32
RNF4-215ENST00000511843 LEPRP48357 1165 aaKnown RBP13.03□□□□□ -0.32
RNF4-215ENST00000511843 LMAN1P49257 510 aa13.03□□□□□ -0.32
RNF4-215ENST00000511843 EPHA4P54764 986 aa13.03□□□□□ -0.32
RNF4-215ENST00000511843 PDE1BQ01064 536 aa13.03□□□□□ -0.32
RNF4-215ENST00000511843 CLPPQ16740 277 aaPredicted RBP13.03□□□□□ -0.32
RNF4-215ENST00000511843 ARHGAP40Q5TG30 622 aa13.03□□□□□ -0.32
RNF4-215ENST00000511843 AGAP9Q5VTM2 703 aa13.03□□□□□ -0.32
RNF4-215ENST00000511843 BROXQ5VW32 411 aa13.03□□□□□ -0.32
RNF4-215ENST00000511843 WASH2PQ6VEQ5 465 aa13.03□□□□□ -0.32
RNF4-215ENST00000511843 PPP1R21Q6ZMI0 780 aa13.03□□□□□ -0.32
RNF4-215ENST00000511843 TAS2R42Q7RTR8 314 aa13.03□□□□□ -0.32
RNF4-215ENST00000511843 SNX20Q7Z614 316 aa13.03□□□□□ -0.32
RNF4-215ENST00000511843 PIANPQ8IYJ0 282 aa13.03□□□□□ -0.32
RNF4-215ENST00000511843 CCDC89Q8N998 374 aa13.03□□□□□ -0.32
RNF4-215ENST00000511843 DNAAF3Q8N9W5 541 aa13.03□□□□□ -0.32
RNF4-215ENST00000511843 TRIM58Q8NG06 486 aa13.03□□□□□ -0.32
RNF4-215ENST00000511843 RSC1A1Q92681 617 aa13.03□□□□□ -0.32
RNF4-215ENST00000511843 TMEM159Q96B96 161 aa13.03□□□□□ -0.32
RNF4-215ENST00000511843 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.03□□□□□ -0.32
RNF4-215ENST00000511843 FRMD8P1Q9BZ68 369 aaPredicted RBP13.03□□□□□ -0.32
RNF4-215ENST00000511843 WWP1Q9H0M0 922 aa13.03□□□□□ -0.32
RNF4-215ENST00000511843 SLC40A1Q9NP59 571 aa13.03□□□□□ -0.32
RNF4-215ENST00000511843 WASH6PQ9NQA3 447 aa13.03□□□□□ -0.32
RNF4-215ENST00000511843 IMP3Q9NV31 184 aaKnown RBP13.03□□□□□ -0.32
RNF4-215ENST00000511843 FEZ2Q9UHY8 353 aaPredicted RBP13.03□□□□□ -0.32
RNF4-215ENST00000511843 MROH6A6NGR9 719 aa13.02□□□□□ -0.33
RNF4-215ENST00000511843 NRDCO43847 1150 aa13.02□□□□□ -0.33
RNF4-215ENST00000511843 UBXN7O94888 489 aa13.02□□□□□ -0.33
RNF4-215ENST00000511843 POLBP06746 335 aa13.02□□□□□ -0.33
RNF4-215ENST00000511843 APRTP07741 180 aa13.02□□□□□ -0.33
RNF4-215ENST00000511843 AMD1P17707 334 aa13.02□□□□□ -0.33
RNF4-215ENST00000511843 FDFT1P37268 417 aa13.02□□□□□ -0.33
RNF4-215ENST00000511843 HADHAP40939 763 aa13.02□□□□□ -0.33
RNF4-215ENST00000511843 HALP42357 657 aa13.02□□□□□ -0.33
RNF4-215ENST00000511843 TERF1P54274 439 aa13.02□□□□□ -0.33
RNF4-215ENST00000511843 TMPRSS3P57727 454 aa13.02□□□□□ -0.33
RNF4-215ENST00000511843 PPP1CAP62136 330 aa13.02□□□□□ -0.33
RNF4-215ENST00000511843 DMPKQ09013 629 aa13.02□□□□□ -0.33
RNF4-215ENST00000511843 TRA2AQ13595 282 aaKnown RBP eCLIP13.02□□□□□ -0.33
RNF4-215ENST00000511843 RPE65Q16518 533 aa13.02□□□□□ -0.33
RNF4-215ENST00000511843 CCNG2Q16589 344 aa13.02□□□□□ -0.33
RNF4-215ENST00000511843 WDR74Q6RFH5 385 aaPredicted RBP13.02□□□□□ -0.33
RNF4-215ENST00000511843 VASH2Q86V25 355 aa13.02□□□□□ -0.33
RNF4-215ENST00000511843 SERPINA9Q86WD7 417 aa13.02□□□□□ -0.33
RNF4-215ENST00000511843 AGBL5Q8NDL9 886 aa13.02□□□□□ -0.33
RNF4-215ENST00000511843 SPDYE1Q8NFV5 336 aaPredicted RBP13.02□□□□□ -0.33
RNF4-215ENST00000511843 ULK4Q96C45 1275 aa13.02□□□□□ -0.33
RNF4-215ENST00000511843 DCUN1D1Q96GG9 259 aa13.02□□□□□ -0.33
RNF4-215ENST00000511843 CDKN2AIPNLQ96HQ2 116 aa13.02□□□□□ -0.33
RNF4-215ENST00000511843 ZNF778Q96MU6 729 aa13.02□□□□□ -0.33
RNF4-215ENST00000511843 TGM7Q96PF1 710 aa13.02□□□□□ -0.33
RNF4-215ENST00000511843 COPS8Q99627 209 aa13.02□□□□□ -0.33
RNF4-215ENST00000511843 CTRCQ99895 268 aa13.02□□□□□ -0.33
RNF4-215ENST00000511843 DPH1Q9BZG8 443 aa13.02□□□□□ -0.33
RNF4-215ENST00000511843 POT1Q9NUX5 634 aa13.02□□□□□ -0.33
RNF4-215ENST00000511843 SLC39A1Q9NY26 324 aa13.02□□□□□ -0.33
RNF4-215ENST00000511843 SMARCAL1Q9NZC9 954 aa13.02□□□□□ -0.33
RNF4-215ENST00000511843 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.02□□□□□ -0.33
RNF4-215ENST00000511843 AKAP7Q9P0M2 348 aaPredicted RBP13.02□□□□□ -0.33
RNF4-215ENST00000511843 SLC2A6Q9UGQ3 507 aa13.02□□□□□ -0.33
RNF4-215ENST00000511843 B3GALT1Q9Y5Z6 326 aa13.02□□□□□ -0.33
RNF4-215ENST00000511843 AHCTF1Q8WYP5 2266 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms