RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 RBM12BQ8IXT5 1001 aaKnown RBP18.59■□□□□ 0.57
HMGCS1-206ENST00000511774 DSELQ8IZU8 1212 aa18.59■□□□□ 0.57
HMGCS1-206ENST00000511774 TTC30BQ8N4P2 665 aa18.59■□□□□ 0.57
HMGCS1-206ENST00000511774 PCMTD1Q96MG8 357 aaPredicted RBP18.59■□□□□ 0.57
HMGCS1-206ENST00000511774 TUBB2BQ9BVA1 445 aa18.59■□□□□ 0.57
HMGCS1-206ENST00000511774 NUP85Q9BW27 656 aa18.59■□□□□ 0.57
HMGCS1-206ENST00000511774 KCND1Q9NSA2 647 aa18.59■□□□□ 0.57
HMGCS1-206ENST00000511774 RPL26L1Q9UNX3 145 aaKnown RBP18.59■□□□□ 0.57
HMGCS1-206ENST00000511774 B3GNT3Q9Y2A9 372 aa18.59■□□□□ 0.57
HMGCS1-206ENST00000511774 DOCK10Q96BY6 2186 aa18.59■□□□□ 0.57
HMGCS1-206ENST00000511774 ANKRD66B4E2M5 251 aa18.58■□□□□ 0.56
HMGCS1-206ENST00000511774 GPR89AB7ZAQ6 455 aa18.58■□□□□ 0.56
HMGCS1-206ENST00000511774 MASP2O00187 686 aa18.58■□□□□ 0.56
HMGCS1-206ENST00000511774 MEN1O00255 615 aa18.58■□□□□ 0.56
HMGCS1-206ENST00000511774 MATN3O15232 486 aa18.58■□□□□ 0.56
HMGCS1-206ENST00000511774 GPR89BP0CG08 455 aa18.58■□□□□ 0.56
HMGCS1-206ENST00000511774 IDSP22304 550 aa18.58■□□□□ 0.56
HMGCS1-206ENST00000511774 UBE2HP62256 183 aa18.58■□□□□ 0.56
HMGCS1-206ENST00000511774 GALNT2Q10471 571 aa18.58■□□□□ 0.56
HMGCS1-206ENST00000511774 GALNT3Q14435 633 aa18.58■□□□□ 0.56
HMGCS1-206ENST00000511774 MED25Q71SY5 747 aa18.58■□□□□ 0.56
HMGCS1-206ENST00000511774 TMEM102Q8N9M5 508 aaPredicted RBP18.58■□□□□ 0.56
HMGCS1-206ENST00000511774 NLNQ9BYT8 704 aa18.58■□□□□ 0.56
HMGCS1-206ENST00000511774 ZBTB20Q9HC78 741 aaPredicted RBP18.58■□□□□ 0.56
HMGCS1-206ENST00000511774 SHOC2Q9UQ13 582 aa18.58■□□□□ 0.56
HMGCS1-206ENST00000511774 ENTPD4Q9Y227 616 aa18.58■□□□□ 0.56
HMGCS1-206ENST00000511774 TLCD2A6NGC4 264 aa18.57■□□□□ 0.56
HMGCS1-206ENST00000511774 SERPINB6P35237 376 aa18.57■□□□□ 0.56
HMGCS1-206ENST00000511774 HSD11B2P80365 405 aa18.57■□□□□ 0.56
HMGCS1-206ENST00000511774 RPE65Q16518 533 aa18.57■□□□□ 0.56
HMGCS1-206ENST00000511774 ZNF789Q5FWF6 425 aa18.57■□□□□ 0.56
HMGCS1-206ENST00000511774 DNTTIP2Q5QJE6 756 aaKnown RBP18.57■□□□□ 0.56
HMGCS1-206ENST00000511774 VWA5B1Q5TIE3 1220 aa18.57■□□□□ 0.56
HMGCS1-206ENST00000511774 FAM83HQ6ZRV2 1179 aaPredicted RBP18.57■□□□□ 0.56
HMGCS1-206ENST00000511774 CUZD1Q86UP6 607 aa18.57■□□□□ 0.56
HMGCS1-206ENST00000511774 KMT5CQ86Y97 462 aa18.57■□□□□ 0.56
HMGCS1-206ENST00000511774 TMEM151BQ8IW70 566 aa18.57■□□□□ 0.56
HMGCS1-206ENST00000511774 TRAM1L1Q8N609 369 aa18.57■□□□□ 0.56
HMGCS1-206ENST00000511774 CCHCR1Q8TD31 782 aa18.57■□□□□ 0.56
HMGCS1-206ENST00000511774 LRFN5Q96NI6 719 aa18.57■□□□□ 0.56
HMGCS1-206ENST00000511774 ZSCAN5AQ9BUG6 496 aa18.57■□□□□ 0.56
HMGCS1-206ENST00000511774 PCMTD2Q9NV79 361 aa18.57■□□□□ 0.56
HMGCS1-206ENST00000511774 PSMD13Q9UNM6 376 aa18.57■□□□□ 0.56
HMGCS1-206ENST00000511774 MYO7BQ6PIF6 2116 aa18.56■□□□□ 0.56
HMGCS1-206ENST00000511774 ANKRD12Q6UB98 2062 aa18.56■□□□□ 0.56
HMGCS1-206ENST00000511774 OR5K3A6NET4 321 aa18.56■□□□□ 0.56
HMGCS1-206ENST00000511774 CDK14O94921 469 aa18.56■□□□□ 0.56
HMGCS1-206ENST00000511774 SLC4A1P02730 911 aa18.56■□□□□ 0.56
HMGCS1-206ENST00000511774 FTLP02792 175 aaPredicted RBP18.56■□□□□ 0.56
HMGCS1-206ENST00000511774 CD86P42081 329 aa18.56■□□□□ 0.56
HMGCS1-206ENST00000511774 ARCN1P48444 511 aaKnown RBP18.56■□□□□ 0.56
HMGCS1-206ENST00000511774 ZNF165P49910 485 aa18.56■□□□□ 0.56
HMGCS1-206ENST00000511774 DCDC1P59894 354 aa18.56■□□□□ 0.56
HMGCS1-206ENST00000511774 SLC25A11Q02978 314 aaKnown RBP18.56■□□□□ 0.56
HMGCS1-206ENST00000511774 PTCHD3Q3KNS1 767 aa18.56■□□□□ 0.56
HMGCS1-206ENST00000511774 BOLA3Q53S33 107 aa18.56■□□□□ 0.56
HMGCS1-206ENST00000511774 NCBP2-AS2Q69YL0 99 aa18.56■□□□□ 0.56
HMGCS1-206ENST00000511774 SP5Q6BEB4 398 aaPredicted RBP18.56■□□□□ 0.56
HMGCS1-206ENST00000511774 SPOCD1Q6ZMY3 1216 aa18.56■□□□□ 0.56
HMGCS1-206ENST00000511774 MCEMP1Q8IX19 187 aa18.56■□□□□ 0.56
HMGCS1-206ENST00000511774 ENOX1Q8TC92 643 aaKnown RBP18.56■□□□□ 0.56
HMGCS1-206ENST00000511774 UBE2Q2Q8WVN8 375 aa18.56■□□□□ 0.56
HMGCS1-206ENST00000511774 TRIB3Q96RU7 358 aa18.56■□□□□ 0.56
HMGCS1-206ENST00000511774 ZFYVE1Q9HBF4 777 aa18.56■□□□□ 0.56
HMGCS1-206ENST00000511774 FANCLQ9NW38 375 aa18.56■□□□□ 0.56
HMGCS1-206ENST00000511774 C5AR2Q9P296 337 aa18.56■□□□□ 0.56
HMGCS1-206ENST00000511774 NFKBIL1Q9UBC1 381 aaPredicted RBP18.56■□□□□ 0.56
HMGCS1-206ENST00000511774 PCDHGA10Q9Y5H3 936 aa18.56■□□□□ 0.56
HMGCS1-206ENST00000511774 CSAG2Q9Y5P2 127 aa18.56■□□□□ 0.56
HMGCS1-206ENST00000511774 COPG1Q9Y678 874 aaKnown RBP18.56■□□□□ 0.56
HMGCS1-206ENST00000511774 CFAP20Q9Y6A4 193 aaKnown RBP18.56■□□□□ 0.56
HMGCS1-206ENST00000511774 LGALS16A8MUM7 142 aa18.55■□□□□ 0.56
HMGCS1-206ENST00000511774 E2F3O00716 465 aa18.55■□□□□ 0.56
HMGCS1-206ENST00000511774 LRRTM2O43300 516 aa18.55■□□□□ 0.56
HMGCS1-206ENST00000511774 ZG16O60844 167 aa18.55■□□□□ 0.56
HMGCS1-206ENST00000511774 FERP16591 822 aa18.55■□□□□ 0.56
HMGCS1-206ENST00000511774 BPIP17213 487 aa18.55■□□□□ 0.56
HMGCS1-206ENST00000511774 CES1P23141 567 aa18.55■□□□□ 0.56
HMGCS1-206ENST00000511774 ARL4DP49703 201 aa18.55■□□□□ 0.56
HMGCS1-206ENST00000511774 KPNA2P52292 529 aaKnown RBP18.55■□□□□ 0.56
HMGCS1-206ENST00000511774 ZRSR2Q15696 482 aaKnown RBP18.55■□□□□ 0.56
HMGCS1-206ENST00000511774 KYNUQ16719 465 aa18.55■□□□□ 0.56
HMGCS1-206ENST00000511774 ANO6Q4KMQ2 910 aa18.55■□□□□ 0.56
HMGCS1-206ENST00000511774 E4F1Q66K89 784 aaPredicted RBP18.55■□□□□ 0.56
HMGCS1-206ENST00000511774 DUS1LQ6P1R4 473 aaKnown RBP18.55■□□□□ 0.56
HMGCS1-206ENST00000511774 TMC3Q7Z5M5 1100 aa18.55■□□□□ 0.56
HMGCS1-206ENST00000511774 LRRC49Q8IUZ0 686 aa18.55■□□□□ 0.56
HMGCS1-206ENST00000511774 BTBD6Q96KE9 485 aa18.55■□□□□ 0.56
HMGCS1-206ENST00000511774 ERGIC2Q96RQ1 377 aa18.55■□□□□ 0.56
HMGCS1-206ENST00000511774 TLR10Q9BXR5 811 aa18.55■□□□□ 0.56
HMGCS1-206ENST00000511774 ZNF552Q9H707 407 aaPredicted RBP18.55■□□□□ 0.56
HMGCS1-206ENST00000511774 LATS2Q9NRM7 1088 aa18.55■□□□□ 0.56
HMGCS1-206ENST00000511774 MYO1AQ9UBC5 1043 aa18.55■□□□□ 0.56
HMGCS1-206ENST00000511774 G3BP2Q9UN86 482 aaKnown RBP18.55■□□□□ 0.56
HMGCS1-206ENST00000511774 PCM1Q15154 2024 aa18.54■□□□□ 0.56
HMGCS1-206ENST00000511774 UBA6A0AVT1 1052 aaPredicted RBP18.54■□□□□ 0.56
HMGCS1-206ENST00000511774 VEGFDO43915 354 aa18.54■□□□□ 0.56
HMGCS1-206ENST00000511774 KLK3P07288 261 aaPredicted RBP18.54■□□□□ 0.56
HMGCS1-206ENST00000511774 ARSEP51690 589 aa18.54■□□□□ 0.56
HMGCS1-206ENST00000511774 GSDMDP57764 484 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms