RNA–Protein interactions for RNA: ENST00000509980.5

EXOSC9-208, Transcript of exosome component 9, human

TSL 2

Gene EXOSC9, Length 1,317 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EXOSC9-208	ENST00000509980	FGFR1OP	O95684	399 aa	Known RBP	10.14	□□□□□ -0.79
EXOSC9-208	ENST00000509980	IGHE	P01854	428 aa		10.14	□□□□□ -0.79
EXOSC9-208	ENST00000509980	GPR89B	P0CG08	455 aa		10.14	□□□□□ -0.79
EXOSC9-208	ENST00000509980	ZNF7	P17097	686 aa	Predicted RBP	10.14	□□□□□ -0.79
EXOSC9-208	ENST00000509980	CHRNB2	P17787	502 aa		10.14	□□□□□ -0.79
EXOSC9-208	ENST00000509980	RPL10	P27635	214 aa	Known RBP	10.14	□□□□□ -0.79
EXOSC9-208	ENST00000509980	TDGF1P3	P51864	188 aa		10.14	□□□□□ -0.79
EXOSC9-208	ENST00000509980	EMP3	P54852	163 aa		10.14	□□□□□ -0.79
EXOSC9-208	ENST00000509980	FMO1	Q01740	532 aa		10.14	□□□□□ -0.79
EXOSC9-208	ENST00000509980	CDC16	Q13042	620 aa		10.14	□□□□□ -0.79
EXOSC9-208	ENST00000509980	ZNF169	Q14929	603 aa	Predicted RBP	10.14	□□□□□ -0.79
EXOSC9-208	ENST00000509980	CA9	Q16790	459 aa		10.14	□□□□□ -0.79
EXOSC9-208	ENST00000509980	INSC	Q1MX18	579 aa		10.14	□□□□□ -0.79
EXOSC9-208	ENST00000509980	PLA2G4E	Q3MJ16	856 aa		10.14	□□□□□ -0.79
EXOSC9-208	ENST00000509980	ZNF648	Q5T619	568 aa	Predicted RBP	10.14	□□□□□ -0.79
EXOSC9-208	ENST00000509980	ZNF385C	Q66K41	422 aa	Predicted RBP	10.14	□□□□□ -0.79
EXOSC9-208	ENST00000509980	FCRL6	Q6DN72	434 aa		10.14	□□□□□ -0.79
EXOSC9-208	ENST00000509980	KLHL35	Q6PF15	583 aa		10.14	□□□□□ -0.79
EXOSC9-208	ENST00000509980	CRTC3	Q6UUV7	619 aa		10.14	□□□□□ -0.79
EXOSC9-208	ENST00000509980	RPTN	Q6XPR3	784 aa		10.14	□□□□□ -0.79
EXOSC9-208	ENST00000509980	ZNF677	Q86XU0	584 aa		10.14	□□□□□ -0.79
EXOSC9-208	ENST00000509980	ZNF547	Q8IVP9	402 aa		10.14	□□□□□ -0.79
EXOSC9-208	ENST00000509980	C3orf20	Q8ND61	904 aa		10.14	□□□□□ -0.79
EXOSC9-208	ENST00000509980	DNAJB14	Q8TBM8	379 aa		10.14	□□□□□ -0.79
EXOSC9-208	ENST00000509980	CXorf40B	Q96DE9	158 aa		10.14	□□□□□ -0.79
EXOSC9-208	ENST00000509980	TIGD1	Q96MW7	591 aa		10.14	□□□□□ -0.79
EXOSC9-208	ENST00000509980	EIF3C	Q99613	913 aa	Known RBP	10.14	□□□□□ -0.79
EXOSC9-208	ENST00000509980	TIMM29	Q9BSF4	260 aa		10.14	□□□□□ -0.79
EXOSC9-208	ENST00000509980	SELENOO	Q9BVL4	669 aa		10.14	□□□□□ -0.79
EXOSC9-208	ENST00000509980	OR2AG1	Q9H205	316 aa		10.14	□□□□□ -0.79
EXOSC9-208	ENST00000509980	FAM83D	Q9H4H8	585 aa		10.14	□□□□□ -0.79
EXOSC9-208	ENST00000509980	TRIM39	Q9HCM9	518 aa		10.14	□□□□□ -0.79
EXOSC9-208	ENST00000509980	GPATCH2L	Q9NWQ4	482 aa		10.14	□□□□□ -0.79
EXOSC9-208	ENST00000509980	P4HTM	Q9NXG6	502 aa		10.14	□□□□□ -0.79
EXOSC9-208	ENST00000509980	DTL	Q9NZJ0	730 aa		10.14	□□□□□ -0.79
EXOSC9-208	ENST00000509980	SUCO	Q9UBS9	1254 aa	Known RBP	10.14	□□□□□ -0.79
EXOSC9-208	ENST00000509980	BTRC	Q9Y297	605 aa		10.14	□□□□□ -0.79
EXOSC9-208	ENST00000509980	DNAJC16	Q9Y2G8	782 aa		10.14	□□□□□ -0.79
EXOSC9-208	ENST00000509980	PADI2	Q9Y2J8	665 aa		10.14	□□□□□ -0.79
EXOSC9-208	ENST00000509980	UBA6	A0AVT1	1052 aa	Predicted RBP	10.13	□□□□□ -0.79
EXOSC9-208	ENST00000509980	OR5K3	A6NET4	321 aa		10.13	□□□□□ -0.79
EXOSC9-208	ENST00000509980	PEX12	O00623	359 aa		10.13	□□□□□ -0.79
EXOSC9-208	ENST00000509980	LCA5L	O95447	670 aa		10.13	□□□□□ -0.79
EXOSC9-208	ENST00000509980	UNG	P13051	313 aa	Predicted RBP	10.13	□□□□□ -0.79
EXOSC9-208	ENST00000509980	CD99	P14209	185 aa		10.13	□□□□□ -0.79
EXOSC9-208	ENST00000509980	IDS	P22304	550 aa		10.13	□□□□□ -0.79
EXOSC9-208	ENST00000509980	SPINT3	P49223	89 aa		10.13	□□□□□ -0.79
EXOSC9-208	ENST00000509980	DRG2	P55039	364 aa	Known RBP	10.13	□□□□□ -0.79
EXOSC9-208	ENST00000509980	KCNK10	P57789	538 aa		10.13	□□□□□ -0.79
EXOSC9-208	ENST00000509980	CDR2	Q01850	454 aa		10.13	□□□□□ -0.79
EXOSC9-208	ENST00000509980	IHH	Q14623	411 aa		10.13	□□□□□ -0.79
EXOSC9-208	ENST00000509980	PLCL1	Q15111	1095 aa		10.13	□□□□□ -0.79
EXOSC9-208	ENST00000509980	PTCHD3	Q3KNS1	767 aa		10.13	□□□□□ -0.79
EXOSC9-208	ENST00000509980	TDRD12	Q587J7	1177 aa	Known RBP	10.13	□□□□□ -0.79
EXOSC9-208	ENST00000509980	TMTC4	Q5T4D3	741 aa		10.13	□□□□□ -0.79
EXOSC9-208	ENST00000509980	FAM180A	Q6UWF9	173 aa		10.13	□□□□□ -0.79
EXOSC9-208	ENST00000509980	ADGRG6	Q86SQ4	1221 aa		10.13	□□□□□ -0.79
EXOSC9-208	ENST00000509980	CARF	Q8N187	725 aa		10.13	□□□□□ -0.79
EXOSC9-208	ENST00000509980	GPR150	Q8NGU9	434 aa		10.13	□□□□□ -0.79
EXOSC9-208	ENST00000509980	LYSMD1	Q96S90	227 aa		10.13	□□□□□ -0.79
EXOSC9-208	ENST00000509980	DPH2	Q9BQC3	489 aa	Predicted RBP	10.13	□□□□□ -0.79
EXOSC9-208	ENST00000509980	CNPY3	Q9BT09	278 aa		10.13	□□□□□ -0.79
EXOSC9-208	ENST00000509980	REPIN1	Q9BWE0	567 aa	Known RBP	10.13	□□□□□ -0.79
EXOSC9-208	ENST00000509980	ACTR5	Q9H9F9	607 aa	Predicted RBP	10.13	□□□□□ -0.79
EXOSC9-208	ENST00000509980	MCCC2	Q9HCC0	563 aa		10.13	□□□□□ -0.79
EXOSC9-208	ENST00000509980	GDPD2	Q9HCC8	539 aa		10.13	□□□□□ -0.79
EXOSC9-208	ENST00000509980	ARFGAP3	Q9NP61	516 aa		10.13	□□□□□ -0.79
EXOSC9-208	ENST00000509980	OLAH	Q9NV23	265 aa		10.13	□□□□□ -0.79
EXOSC9-208	ENST00000509980	HOOK1	Q9UJC3	728 aa	Known RBP	10.13	□□□□□ -0.79
EXOSC9-208	ENST00000509980	DNPEP	Q9ULA0	475 aa		10.13	□□□□□ -0.79
EXOSC9-208	ENST00000509980	AP4E1	Q9UPM8	1137 aa		10.13	□□□□□ -0.79
EXOSC9-208	ENST00000509980	WDR37	Q9Y2I8	494 aa		10.13	□□□□□ -0.79
EXOSC9-208	ENST00000509980	FAM221A	A4D161	298 aa		10.12	□□□□□ -0.79
EXOSC9-208	ENST00000509980	RGSL1	A5PLK6	1076 aa		10.12	□□□□□ -0.79
EXOSC9-208	ENST00000509980		F8VZ95	297 aa		10.12	□□□□□ -0.79
EXOSC9-208	ENST00000509980	CCL21	O00585	134 aa		10.12	□□□□□ -0.79
EXOSC9-208	ENST00000509980	KMO	O15229	486 aa		10.12	□□□□□ -0.79
EXOSC9-208	ENST00000509980	DAPK3	O43293	454 aa		10.12	□□□□□ -0.79
EXOSC9-208	ENST00000509980	LDB2	O43679	373 aa		10.12	□□□□□ -0.79
EXOSC9-208	ENST00000509980	VEGFD	O43915	354 aa		10.12	□□□□□ -0.79
EXOSC9-208	ENST00000509980	MAFK	O60675	156 aa		10.12	□□□□□ -0.79
EXOSC9-208	ENST00000509980	IL4R	P24394	825 aa		10.12	□□□□□ -0.79
EXOSC9-208	ENST00000509980	ARCN1	P48444	511 aa	Known RBP	10.12	□□□□□ -0.79
EXOSC9-208	ENST00000509980	RPL7A	P62424	266 aa	Known RBP	10.12	□□□□□ -0.79
EXOSC9-208	ENST00000509980	KLHDC7A	Q5VTJ3	777 aa		10.12	□□□□□ -0.79
EXOSC9-208	ENST00000509980	RPUSD3	Q6P087	351 aa	Known RBP	10.12	□□□□□ -0.79
EXOSC9-208	ENST00000509980	MTFR2	Q6P444	385 aa		10.12	□□□□□ -0.79
EXOSC9-208	ENST00000509980	XKRX	Q6PP77	449 aa		10.12	□□□□□ -0.79
EXOSC9-208	ENST00000509980	PPP1R32	Q7Z5V6	425 aa		10.12	□□□□□ -0.79
EXOSC9-208	ENST00000509980	C11orf96	Q7Z7L8	435 aa		10.12	□□□□□ -0.79
EXOSC9-208	ENST00000509980	LRRTM4	Q86VH4	590 aa		10.12	□□□□□ -0.79
EXOSC9-208	ENST00000509980	PHF13	Q86YI8	300 aa	Predicted RBP	10.12	□□□□□ -0.79
EXOSC9-208	ENST00000509980	CREBRF	Q8IUR6	639 aa		10.12	□□□□□ -0.79
EXOSC9-208	ENST00000509980	ELOA2	Q8IYF1	753 aa	Predicted RBP	10.12	□□□□□ -0.79
EXOSC9-208	ENST00000509980	BCORP1	Q8N888	145 aa		10.12	□□□□□ -0.79
EXOSC9-208	ENST00000509980	OR1L3	Q8NH93	324 aa		10.12	□□□□□ -0.79
EXOSC9-208	ENST00000509980	KCTD15	Q96SI1	283 aa	Predicted RBP	10.12	□□□□□ -0.79
EXOSC9-208	ENST00000509980	TRIM56	Q9BRZ2	755 aa	Known RBP	10.12	□□□□□ -0.79
EXOSC9-208	ENST00000509980	DHX35	Q9H5Z1	703 aa	Known RBP	10.12	□□□□□ -0.79
EXOSC9-208	ENST00000509980	ATP13A2	Q9NQ11	1180 aa		10.12	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms