RNA–Protein interactions for RNA: ENST00000508473.5

SRPK1-210, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-210ENST00000508473 PSMD13Q9UNM6 376 aa23.7■■□□□ 1.38
SRPK1-210ENST00000508473 LHX6Q9UPM6 363 aa23.7■■□□□ 1.38
SRPK1-210ENST00000508473 DNMT3AQ9Y6K1 912 aaPredicted RBP23.7■■□□□ 1.38
SRPK1-210ENST00000508473 MROH6A6NGR9 719 aa23.69■■□□□ 1.38
SRPK1-210ENST00000508473 CDRT15L2A8MXV6 281 aa23.69■■□□□ 1.38
SRPK1-210ENST00000508473 KCNJ13O60928 360 aa23.69■■□□□ 1.38
SRPK1-210ENST00000508473 ITGA2BP08514 1039 aa23.69■■□□□ 1.38
SRPK1-210ENST00000508473 ETV5P41161 510 aa23.69■■□□□ 1.38
SRPK1-210ENST00000508473 ABCG1P45844 678 aa23.69■■□□□ 1.38
SRPK1-210ENST00000508473 ARSDP51689 593 aa23.69■■□□□ 1.38
SRPK1-210ENST00000508473 DMPKQ09013 629 aa23.69■■□□□ 1.38
SRPK1-210ENST00000508473 SNAP47Q5SQN1 464 aa23.69■■□□□ 1.38
SRPK1-210ENST00000508473 AGAP9Q5VTM2 703 aa23.69■■□□□ 1.38
SRPK1-210ENST00000508473 TMEM71Q6P5X7 295 aa23.69■■□□□ 1.38
SRPK1-210ENST00000508473 WASH2PQ6VEQ5 465 aa23.69■■□□□ 1.38
SRPK1-210ENST00000508473 AVL9Q8NBF6 648 aa23.69■■□□□ 1.38
SRPK1-210ENST00000508473 ZNF248Q8NDW4 579 aa23.69■■□□□ 1.38
SRPK1-210ENST00000508473 CXorf40BQ96DE9 158 aa23.69■■□□□ 1.38
SRPK1-210ENST00000508473 CRELD1Q96HD1 420 aa23.69■■□□□ 1.38
SRPK1-210ENST00000508473 ZNF514Q96K75 400 aaPredicted RBP23.69■■□□□ 1.38
SRPK1-210ENST00000508473 CASS4Q9NQ75 786 aa23.69■■□□□ 1.38
SRPK1-210ENST00000508473 WASH6PQ9NQA3 447 aa23.69■■□□□ 1.38
SRPK1-210ENST00000508473 ZZEF1O43149 2961 aa23.68■■□□□ 1.38
SRPK1-210ENST00000508473 OR51F1A6NGY5 319 aa23.68■■□□□ 1.38
SRPK1-210ENST00000508473 H7C0S8 307 aa23.68■■□□□ 1.38
SRPK1-210ENST00000508473 SGTAO43765 313 aa23.68■■□□□ 1.38
SRPK1-210ENST00000508473 THRAP10827 490 aa23.68■■□□□ 1.38
SRPK1-210ENST00000508473 RALBP11234 206 aa23.68■■□□□ 1.38
SRPK1-210ENST00000508473 HALP42357 657 aa23.68■■□□□ 1.38
SRPK1-210ENST00000508473 MAPK10P53779 464 aa23.68■■□□□ 1.38
SRPK1-210ENST00000508473 BASP1P80723 227 aaKnown RBP23.68■■□□□ 1.38
SRPK1-210ENST00000508473 SKIDA1Q1XH10 827 aa23.68■■□□□ 1.38
SRPK1-210ENST00000508473 GPR33Q49SQ1 333 aa23.68■■□□□ 1.38
SRPK1-210ENST00000508473 TMEM26Q6ZUK4 368 aa23.68■■□□□ 1.38
SRPK1-210ENST00000508473 SERPINA9Q86WD7 417 aa23.68■■□□□ 1.38
SRPK1-210ENST00000508473 TMEM159Q96B96 161 aa23.68■■□□□ 1.38
SRPK1-210ENST00000508473 PBKQ96KB5 322 aa23.68■■□□□ 1.38
SRPK1-210ENST00000508473 DPYSL5Q9BPU6 564 aa23.68■■□□□ 1.38
SRPK1-210ENST00000508473 AP1M1Q9BXS5 423 aa23.68■■□□□ 1.38
SRPK1-210ENST00000508473 HOMER3Q9NSC5 361 aa23.68■■□□□ 1.38
SRPK1-210ENST00000508473 ZDHHC3Q9NYG2 299 aa23.68■■□□□ 1.38
SRPK1-210ENST00000508473 SMARCAL1Q9NZC9 954 aa23.68■■□□□ 1.38
SRPK1-210ENST00000508473 AKAP7Q9P0M2 348 aaPredicted RBP23.68■■□□□ 1.38
SRPK1-210ENST00000508473 ZNF106Q9H2Y7 1883 aaKnown RBP23.68■■□□□ 1.38
SRPK1-210ENST00000508473 MGAT4DA6NG13 374 aa23.67■■□□□ 1.38
SRPK1-210ENST00000508473 A8MU76 341 aa23.67■■□□□ 1.38
SRPK1-210ENST00000508473 CFAP99D6REC4 459 aa23.67■■□□□ 1.38
SRPK1-210ENST00000508473 CCL4P13236 92 aa23.67■■□□□ 1.38
SRPK1-210ENST00000508473 MLLT3P42568 568 aaPredicted RBP23.67■■□□□ 1.38
SRPK1-210ENST00000508473 TERF1P54274 439 aa23.67■■□□□ 1.38
SRPK1-210ENST00000508473 EPHA4P54764 986 aa23.67■■□□□ 1.38
SRPK1-210ENST00000508473 CACNG1Q06432 222 aa23.67■■□□□ 1.38
SRPK1-210ENST00000508473 TRIP13Q15645 432 aaPredicted RBP23.67■■□□□ 1.38
SRPK1-210ENST00000508473 BCL7AQ4VC05 210 aa23.67■■□□□ 1.38
SRPK1-210ENST00000508473 CLEC14AQ86T13 490 aa23.67■■□□□ 1.38
SRPK1-210ENST00000508473 SPACA3Q8IXA5 215 aa23.67■■□□□ 1.38
SRPK1-210ENST00000508473 PIANPQ8IYJ0 282 aa23.67■■□□□ 1.38
SRPK1-210ENST00000508473 RASGEF1CQ8N431 466 aa23.67■■□□□ 1.38
SRPK1-210ENST00000508473 KCNE4Q8WWG9 221 aa23.67■■□□□ 1.38
SRPK1-210ENST00000508473 POT1Q9NUX5 634 aa23.67■■□□□ 1.38
SRPK1-210ENST00000508473 SLC2A6Q9UGQ3 507 aa23.67■■□□□ 1.38
SRPK1-210ENST00000508473 KLHL3Q9UH77 587 aa23.67■■□□□ 1.38
SRPK1-210ENST00000508473 TRBV5-4A0A0C4DH59 114 aa23.66■■□□□ 1.38
SRPK1-210ENST00000508473 HEATR9A2RTY3 570 aa23.66■■□□□ 1.38
SRPK1-210ENST00000508473 CCDC162PA2VCL2 907 aa23.66■■□□□ 1.38
SRPK1-210ENST00000508473 LILRA5A6NI73 299 aa23.66■■□□□ 1.38
SRPK1-210ENST00000508473 ATP1B2P14415 290 aaPredicted RBP23.66■■□□□ 1.38
SRPK1-210ENST00000508473 TYRP1P17643 537 aa23.66■■□□□ 1.38
SRPK1-210ENST00000508473 MSNP26038 577 aaKnown RBP23.66■■□□□ 1.38
SRPK1-210ENST00000508473 ACRV1P26436 265 aa23.66■■□□□ 1.38
SRPK1-210ENST00000508473 SLC5A2P31639 672 aa23.66■■□□□ 1.38
SRPK1-210ENST00000508473 OR2L2Q8NH16 312 aa23.66■■□□□ 1.38
SRPK1-210ENST00000508473 HEXDCQ8WVB3 486 aa23.66■■□□□ 1.38
SRPK1-210ENST00000508473 USP7Q93009 1102 aa23.66■■□□□ 1.38
SRPK1-210ENST00000508473 CFAP20Q9Y6A4 193 aaKnown RBP23.66■■□□□ 1.38
SRPK1-210ENST00000508473 HGSO14964 777 aaPredicted RBP23.65■■□□□ 1.38
SRPK1-210ENST00000508473 KIF5CO60282 957 aa23.65■■□□□ 1.38
SRPK1-210ENST00000508473 POLBP06746 335 aa23.65■■□□□ 1.38
SRPK1-210ENST00000508473 ADRA1DP25100 572 aa23.65■■□□□ 1.38
SRPK1-210ENST00000508473 PSMA3P25788 255 aa23.65■■□□□ 1.38
SRPK1-210ENST00000508473 VPS41P49754 854 aa23.65■■□□□ 1.38
SRPK1-210ENST00000508473 SESN2P58004 480 aaPredicted RBP23.65■■□□□ 1.38
SRPK1-210ENST00000508473 TRA2AQ13595 282 aaKnown RBP eCLIP23.65■■□□□ 1.384e-7■■□□□ 12.8
SRPK1-210ENST00000508473 GPR18Q14330 331 aa23.65■■□□□ 1.38
SRPK1-210ENST00000508473 RPE65Q16518 533 aa23.65■■□□□ 1.38
SRPK1-210ENST00000508473 DBN1Q16643 649 aa23.65■■□□□ 1.38
SRPK1-210ENST00000508473 TSTD2Q5T7W7 516 aa23.65■■□□□ 1.38
SRPK1-210ENST00000508473 METRNLQ641Q3 311 aa23.65■■□□□ 1.38
SRPK1-210ENST00000508473 TTC27Q6P3X3 843 aa23.65■■□□□ 1.38
SRPK1-210ENST00000508473 WDR74Q6RFH5 385 aaPredicted RBP23.65■■□□□ 1.38
SRPK1-210ENST00000508473 C4orf22Q6V702 233 aa23.65■■□□□ 1.38
SRPK1-210ENST00000508473 CFAP206Q8IYR0 622 aa23.65■■□□□ 1.38
SRPK1-210ENST00000508473 LILRA3Q8N6C8 439 aaPredicted RBP23.65■■□□□ 1.38
SRPK1-210ENST00000508473 OR13J1Q8NGT2 312 aa23.65■■□□□ 1.38
SRPK1-210ENST00000508473 GPR150Q8NGU9 434 aa23.65■■□□□ 1.38
SRPK1-210ENST00000508473 COG1Q8WTW3 980 aa23.65■■□□□ 1.38
SRPK1-210ENST00000508473 JPH3Q8WXH2 748 aaPredicted RBP23.65■■□□□ 1.38
SRPK1-210ENST00000508473 HDAC10Q969S8 669 aa23.65■■□□□ 1.38
SRPK1-210ENST00000508473 MAGOHBQ96A72 148 aaKnown RBP23.65■■□□□ 1.38
SRPK1-210ENST00000508473 PDLIM2Q96JY6 352 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms