RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 NLRP8Q86W28 1048 aa12.21□□□□□ -0.45
LSM6-204ENST00000504181 TMEM151BQ8IW70 566 aa12.21□□□□□ -0.45
LSM6-204ENST00000504181 RBM12BQ8IXT5 1001 aaKnown RBP12.21□□□□□ -0.45
LSM6-204ENST00000504181 OR1L3Q8NH93 324 aa12.21□□□□□ -0.45
LSM6-204ENST00000504181 FAM172AQ8WUF8 416 aa12.21□□□□□ -0.45
LSM6-204ENST00000504181 NTAN1Q96AB6 310 aa12.21□□□□□ -0.45
LSM6-204ENST00000504181 TREX2Q9BQ50 279 aaPredicted RBP12.21□□□□□ -0.45
LSM6-204ENST00000504181 CRACR2AQ9BSW2 395 aa12.21□□□□□ -0.45
LSM6-204ENST00000504181 NDC1Q9BTX1 674 aa12.21□□□□□ -0.45
LSM6-204ENST00000504181 DHRS4Q9BTZ2 278 aa12.21□□□□□ -0.45
LSM6-204ENST00000504181 CARD9Q9H257 536 aa12.21□□□□□ -0.45
LSM6-204ENST00000504181 FANCEQ9HB96 536 aa12.21□□□□□ -0.45
LSM6-204ENST00000504181 KIAA1468Q9P260 1216 aa12.21□□□□□ -0.45
LSM6-204ENST00000504181 ATXN10Q9UBB4 475 aa12.21□□□□□ -0.45
LSM6-204ENST00000504181 TINAGQ9UJW2 476 aa12.21□□□□□ -0.45
LSM6-204ENST00000504181 TMEM150CB9EJG8 249 aa12.2□□□□□ -0.46
LSM6-204ENST00000504181 AGXTP21549 392 aa12.2□□□□□ -0.46
LSM6-204ENST00000504181 CMA1P23946 247 aa12.2□□□□□ -0.46
LSM6-204ENST00000504181 CDH5P33151 784 aaPredicted RBP12.2□□□□□ -0.46
LSM6-204ENST00000504181 RENBPP51606 427 aa12.2□□□□□ -0.46
LSM6-204ENST00000504181 RBPJQ06330 500 aa12.2□□□□□ -0.46
LSM6-204ENST00000504181 C3AR1Q16581 482 aa12.2□□□□□ -0.46
LSM6-204ENST00000504181 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.2□□□□□ -0.46
LSM6-204ENST00000504181 ZFYVE27Q5T4F4 411 aa12.2□□□□□ -0.46
LSM6-204ENST00000504181 IRAK1BP1Q5VVH5 260 aa12.2□□□□□ -0.46
LSM6-204ENST00000504181 PRAMEF13Q5VWM6 474 aa12.2□□□□□ -0.46
LSM6-204ENST00000504181 TRIM65Q6PJ69 517 aa12.2□□□□□ -0.46
LSM6-204ENST00000504181 KRBA2Q6ZNG9 492 aa12.2□□□□□ -0.46
LSM6-204ENST00000504181 LINC00696Q6ZRV3 163 aa12.2□□□□□ -0.46
LSM6-204ENST00000504181 B4GALNT4Q76KP1 1039 aa12.2□□□□□ -0.46
LSM6-204ENST00000504181 ARCQ7LC44 396 aa12.2□□□□□ -0.46
LSM6-204ENST00000504181 STRADAQ7RTN6 431 aa12.2□□□□□ -0.46
LSM6-204ENST00000504181 GPR150Q8NGU9 434 aa12.2□□□□□ -0.46
LSM6-204ENST00000504181 JOSD2Q8TAC2 188 aa12.2□□□□□ -0.46
LSM6-204ENST00000504181 EPS8L1Q8TE68 723 aa12.2□□□□□ -0.46
LSM6-204ENST00000504181 PPM1MQ96MI6 270 aa12.2□□□□□ -0.46
LSM6-204ENST00000504181 CEP63Q96MT8 703 aa12.2□□□□□ -0.46
LSM6-204ENST00000504181 CD180Q99467 661 aa12.2□□□□□ -0.46
LSM6-204ENST00000504181 TRIM56Q9BRZ2 755 aaKnown RBP12.2□□□□□ -0.46
LSM6-204ENST00000504181 OR2AG1Q9H205 316 aa12.2□□□□□ -0.46
LSM6-204ENST00000504181 SLC6A20Q9NP91 592 aa12.2□□□□□ -0.46
LSM6-204ENST00000504181 GPN3Q9UHW5 284 aaPredicted RBP12.2□□□□□ -0.46
LSM6-204ENST00000504181 AGPSO00116 658 aa12.19□□□□□ -0.46
LSM6-204ENST00000504181 DFFAO00273 331 aa12.19□□□□□ -0.46
LSM6-204ENST00000504181 FGF10O15520 208 aaPredicted RBP12.19□□□□□ -0.46
LSM6-204ENST00000504181 PGLSO95336 258 aa12.19□□□□□ -0.46
LSM6-204ENST00000504181 SLC9A1P19634 815 aa12.19□□□□□ -0.46
LSM6-204ENST00000504181 MST1P26927 711 aa12.19□□□□□ -0.46
LSM6-204ENST00000504181 SLC10A7Q0GE19 358 aa12.19□□□□□ -0.46
LSM6-204ENST00000504181 RFTN1Q14699 578 aaPredicted RBP12.19□□□□□ -0.46
LSM6-204ENST00000504181 LBRQ14739 615 aaKnown RBP12.19□□□□□ -0.46
LSM6-204ENST00000504181 LONRF1Q17RB8 773 aa12.19□□□□□ -0.46
LSM6-204ENST00000504181 C8orf34Q49A92 452 aa12.19□□□□□ -0.46
LSM6-204ENST00000504181 ZNF789Q5FWF6 425 aa12.19□□□□□ -0.46
LSM6-204ENST00000504181 ZNF658Q5TYW1 1059 aaPredicted RBP12.19□□□□□ -0.46
LSM6-204ENST00000504181 ZNF385CQ66K41 422 aaPredicted RBP12.19□□□□□ -0.46
LSM6-204ENST00000504181 KLHL35Q6PF15 583 aa12.19□□□□□ -0.46
LSM6-204ENST00000504181 ABRAXAS1Q6UWZ7 409 aa12.19□□□□□ -0.46
LSM6-204ENST00000504181 TRIM59Q8IWR1 403 aa12.19□□□□□ -0.46
LSM6-204ENST00000504181 ADAMTS18Q8TE60 1221 aa12.19□□□□□ -0.46
LSM6-204ENST00000504181 NUDT8Q8WV74 236 aa12.19□□□□□ -0.46
LSM6-204ENST00000504181 PSKH2Q96QS6 385 aa12.19□□□□□ -0.46
LSM6-204ENST00000504181 WDR24Q96S15 920 aa12.19□□□□□ -0.46
LSM6-204ENST00000504181 DPH2Q9BQC3 489 aaPredicted RBP12.19□□□□□ -0.46
LSM6-204ENST00000504181 NOD2Q9HC29 1040 aa12.19□□□□□ -0.46
LSM6-204ENST00000504181 FAM207AQ9NSI2 230 aaPredicted RBP12.19□□□□□ -0.46
LSM6-204ENST00000504181 APEX2Q9UBZ4 518 aa12.19□□□□□ -0.46
LSM6-204ENST00000504181 ADGRG1Q9Y653 693 aa12.19□□□□□ -0.46
LSM6-204ENST00000504181 CCDC66A2RUB6 948 aa12.18□□□□□ -0.46
LSM6-204ENST00000504181 SLC19A2O60779 497 aa12.18□□□□□ -0.46
LSM6-204ENST00000504181 PDHA1P08559 390 aa12.18□□□□□ -0.46
LSM6-204ENST00000504181 ZNF30P17039 623 aa12.18□□□□□ -0.46
LSM6-204ENST00000504181 ZNF7P17097 686 aaPredicted RBP12.18□□□□□ -0.46
LSM6-204ENST00000504181 PTPN9P43378 593 aa12.18□□□□□ -0.46
LSM6-204ENST00000504181 STC1P52823 247 aa12.18□□□□□ -0.46
LSM6-204ENST00000504181 FOLH1Q04609 750 aa12.18□□□□□ -0.46
LSM6-204ENST00000504181 ADCY2Q08462 1091 aa12.18□□□□□ -0.46
LSM6-204ENST00000504181 PNOCQ13519 176 aa12.18□□□□□ -0.46
LSM6-204ENST00000504181 SLC9A5Q14940 896 aa12.18□□□□□ -0.46
LSM6-204ENST00000504181 COBLL1Q53SF7 1204 aa12.18□□□□□ -0.46
LSM6-204ENST00000504181 ARMC12Q5T9G4 340 aa12.18□□□□□ -0.46
LSM6-204ENST00000504181 TAF3Q5VWG9 929 aa12.18□□□□□ -0.46
LSM6-204ENST00000504181 SCYL2Q6P3W7 929 aa12.18□□□□□ -0.46
LSM6-204ENST00000504181 MSANTD4Q8NCY6 345 aa12.18□□□□□ -0.46
LSM6-204ENST00000504181 OR2Y1Q8NGV0 311 aa12.18□□□□□ -0.46
LSM6-204ENST00000504181 CPLX3Q8WVH0 158 aa12.18□□□□□ -0.46
LSM6-204ENST00000504181 PIH1D2Q8WWB5 315 aa12.18□□□□□ -0.46
LSM6-204ENST00000504181 CPA5Q8WXQ8 436 aa12.18□□□□□ -0.46
LSM6-204ENST00000504181 SPATA32Q96LK8 384 aa12.18□□□□□ -0.46
LSM6-204ENST00000504181 FAM81BQ96LP2 452 aa12.18□□□□□ -0.46
LSM6-204ENST00000504181 NUDCD1Q96RS6 583 aa12.18□□□□□ -0.46
LSM6-204ENST00000504181 GPAMQ9HCL2 828 aa12.18□□□□□ -0.46
LSM6-204ENST00000504181 FBXL4Q9UKA2 621 aa12.18□□□□□ -0.46
LSM6-204ENST00000504181 RCOR1Q9UKL0 485 aa12.18□□□□□ -0.46
LSM6-204ENST00000504181 PPIL1Q9Y3C6 166 aa12.18□□□□□ -0.46
LSM6-204ENST00000504181 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.18□□□□□ -0.46
LSM6-204ENST00000504181 OR5K3A6NET4 321 aa12.17□□□□□ -0.46
LSM6-204ENST00000504181 C2CD4BA6NLJ0 364 aa12.17□□□□□ -0.46
LSM6-204ENST00000504181 ZNF749O43361 778 aa12.17□□□□□ -0.46
LSM6-204ENST00000504181 CNOT3O75175 753 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms