RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 SPASTQ9UBP0 616 aa21.42■■□□□ 1.02
C9orf3-222ENST00000496567 PCYT1BQ9Y5K3 369 aaPredicted RBP21.42■■□□□ 1.02
C9orf3-222ENST00000496567 RALGAPA1Q6GYQ0 2036 aa21.41■■□□□ 1.02
C9orf3-222ENST00000496567 C17orf113A0A1B0GUU1 675 aa21.41■■□□□ 1.02
C9orf3-222ENST00000496567 POC1B-GALNT4F8VUJ3 575 aa21.41■■□□□ 1.02
C9orf3-222ENST00000496567 NUDT17P0C025 328 aa21.41■■□□□ 1.02
C9orf3-222ENST00000496567 SPEM2Q0P670 501 aa21.41■■□□□ 1.02
C9orf3-222ENST00000496567 ILF3Q12906 894 aaKnown RBP eCLIP21.41■■□□□ 1.02
C9orf3-222ENST00000496567 PRRT3Q5FWE3 981 aa21.41■■□□□ 1.02
C9orf3-222ENST00000496567 C11orf96Q7Z7L8 435 aa21.41■■□□□ 1.02
C9orf3-222ENST00000496567 AMZ2Q86W34 360 aa21.41■■□□□ 1.02
C9orf3-222ENST00000496567 FSTL5Q8N475 847 aaPredicted RBP21.41■■□□□ 1.02
C9orf3-222ENST00000496567 MRRFQ96E11 262 aaKnown RBP21.41■■□□□ 1.02
C9orf3-222ENST00000496567 MCMBPQ9BTE3 642 aa21.41■■□□□ 1.02
C9orf3-222ENST00000496567 AARSD1Q9BTE6 412 aaKnown RBP21.41■■□□□ 1.02
C9orf3-222ENST00000496567 TMEM168Q9H0V1 697 aa21.41■■□□□ 1.02
C9orf3-222ENST00000496567 TCEAL2Q9H3H9 227 aaPredicted RBP21.41■■□□□ 1.02
C9orf3-222ENST00000496567 SEMA4GQ9NTN9 838 aa21.41■■□□□ 1.02
C9orf3-222ENST00000496567 PCDH15Q96QU1 1955 aa21.41■■□□□ 1.02
C9orf3-222ENST00000496567 A0A1B0GTQ1 180 aa21.4■■□□□ 1.02
C9orf3-222ENST00000496567 MGAT4DA6NG13 374 aa21.4■■□□□ 1.02
C9orf3-222ENST00000496567 E5RI56 91 aa21.4■■□□□ 1.02
C9orf3-222ENST00000496567 TRIM16O95361 564 aa21.4■■□□□ 1.02
C9orf3-222ENST00000496567 ELOCQ15369 112 aa21.4■■□□□ 1.02
C9orf3-222ENST00000496567 CSRP2Q16527 193 aa21.4■■□□□ 1.02
C9orf3-222ENST00000496567 TCEAL6Q6IPX3 200 aa21.4■■□□□ 1.02
C9orf3-222ENST00000496567 ZNF549Q6P9A3 640 aa21.4■■□□□ 1.02
C9orf3-222ENST00000496567 CNPY4Q8N129 248 aa21.4■■□□□ 1.02
C9orf3-222ENST00000496567 GPATCH11Q8N954 259 aa21.4■■□□□ 1.02
C9orf3-222ENST00000496567 OR2L2Q8NH16 312 aa21.4■■□□□ 1.02
C9orf3-222ENST00000496567 KCNJ9Q92806 393 aa21.4■■□□□ 1.02
C9orf3-222ENST00000496567 TCEAL3Q969E4 200 aa21.4■■□□□ 1.02
C9orf3-222ENST00000496567 ATXN7L3BQ96GX2 97 aa21.4■■□□□ 1.02
C9orf3-222ENST00000496567 VPS39Q96JC1 886 aa21.4■■□□□ 1.02
C9orf3-222ENST00000496567 GTPBP2Q9BX10 602 aaKnown RBP21.4■■□□□ 1.02
C9orf3-222ENST00000496567 GSDMCQ9BYG8 508 aa21.4■■□□□ 1.02
C9orf3-222ENST00000496567 TM7SF3Q9NS93 570 aa21.4■■□□□ 1.02
C9orf3-222ENST00000496567 SLC24A2Q9UI40 661 aa21.4■■□□□ 1.02
C9orf3-222ENST00000496567 GPR179Q6PRD1 2367 aa21.4■■□□□ 1.02
C9orf3-222ENST00000496567 KNL1Q8NG31 2342 aa21.4■■□□□ 1.02
C9orf3-222ENST00000496567 SCAMP1O15126 338 aa21.4■■□□□ 1.02
C9orf3-222ENST00000496567 KPNA5O15131 536 aa21.4■■□□□ 1.02
C9orf3-222ENST00000496567 FOXD2O60548 495 aaPredicted RBP21.4■■□□□ 1.02
C9orf3-222ENST00000496567 PIAS2O75928 621 aa21.4■■□□□ 1.02
C9orf3-222ENST00000496567 ACP5P13686 325 aa21.4■■□□□ 1.02
C9orf3-222ENST00000496567 CHRM3P20309 590 aa21.4■■□□□ 1.02
C9orf3-222ENST00000496567 ABCG1P45844 678 aa21.4■■□□□ 1.02
C9orf3-222ENST00000496567 SERPINB9P50453 376 aa21.4■■□□□ 1.02
C9orf3-222ENST00000496567 LIMK2P53671 638 aa21.4■■□□□ 1.02
C9orf3-222ENST00000496567 ARHGAP8P85298 464 aa21.4■■□□□ 1.02
C9orf3-222ENST00000496567 CTBSQ01459 385 aa21.4■■□□□ 1.02
C9orf3-222ENST00000496567 PLA2G4EQ3MJ16 856 aa21.4■■□□□ 1.02
C9orf3-222ENST00000496567 FAM45BPQ6NSW5 357 aa21.4■■□□□ 1.02
C9orf3-222ENST00000496567 TAOK1Q7L7X3 1001 aa21.4■■□□□ 1.02
C9orf3-222ENST00000496567 SDR16C5Q8N3Y7 309 aa21.4■■□□□ 1.02
C9orf3-222ENST00000496567 FAM45AQ8TCE6 357 aa21.4■■□□□ 1.02
C9orf3-222ENST00000496567 GPBAR1Q8TDU6 330 aa21.4■■□□□ 1.02
C9orf3-222ENST00000496567 ANKRD7Q92527 254 aa21.4■■□□□ 1.02
C9orf3-222ENST00000496567 LRRC61Q9BV99 259 aa21.4■■□□□ 1.02
C9orf3-222ENST00000496567 KLC4Q9NSK0 619 aa21.4■■□□□ 1.02
C9orf3-222ENST00000496567 ZNF180Q9UJW8 692 aa21.4■■□□□ 1.02
C9orf3-222ENST00000496567 PIKFYVEQ9Y2I7 2098 aa21.39■■□□□ 1.02
C9orf3-222ENST00000496567 LNP1A1A4G5 178 aa21.39■■□□□ 1.01
C9orf3-222ENST00000496567 IQCF5A8MTL0 148 aa21.39■■□□□ 1.01
C9orf3-222ENST00000496567 VPS26AO75436 327 aa21.39■■□□□ 1.01
C9orf3-222ENST00000496567 FAM155BO75949 473 aa21.39■■□□□ 1.01
C9orf3-222ENST00000496567 SHBGP04278 402 aa21.39■■□□□ 1.01
C9orf3-222ENST00000496567 H2AFXP16104 143 aaPredicted RBP21.39■■□□□ 1.01
C9orf3-222ENST00000496567 PBLDP30039 288 aaPredicted RBP21.39■■□□□ 1.01
C9orf3-222ENST00000496567 CCT8P50990 548 aa21.39■■□□□ 1.01
C9orf3-222ENST00000496567 DMPKQ09013 629 aa21.39■■□□□ 1.01
C9orf3-222ENST00000496567 IFFO1Q0D2I5 559 aa21.39■■□□□ 1.01
C9orf3-222ENST00000496567 HM13Q8TCT9 377 aa21.39■■□□□ 1.01
C9orf3-222ENST00000496567 ELMO2Q96JJ3 720 aa21.39■■□□□ 1.01
C9orf3-222ENST00000496567 NDNQ99608 321 aa21.39■■□□□ 1.01
C9orf3-222ENST00000496567 SPATS2LQ9NUQ6 558 aaKnown RBP21.39■■□□□ 1.01
C9orf3-222ENST00000496567 TAS2R13Q9NYV9 303 aa21.39■■□□□ 1.01
C9orf3-222ENST00000496567 SLC23A2Q9UGH3 650 aa21.39■■□□□ 1.01
C9orf3-222ENST00000496567 VWA7Q9Y334 891 aa21.39■■□□□ 1.01
C9orf3-222ENST00000496567 TMEM131Q92545 1883 aa21.39■■□□□ 1.01
C9orf3-222ENST00000496567 ADAMTS9Q9P2N4 1935 aa21.38■■□□□ 1.01
C9orf3-222ENST00000496567 FAM95CA0A1B0GW59 222 aa21.38■■□□□ 1.01
C9orf3-222ENST00000496567 AQP9O43315 295 aa21.38■■□□□ 1.01
C9orf3-222ENST00000496567 NIPSNAP2O75323 286 aa21.38■■□□□ 1.01
C9orf3-222ENST00000496567 KRT38O76015 456 aa21.38■■□□□ 1.01
C9orf3-222ENST00000496567 ITGA2BP08514 1039 aa21.38■■□□□ 1.01
C9orf3-222ENST00000496567 ITGB6P18564 788 aa21.38■■□□□ 1.01
C9orf3-222ENST00000496567 CD9P21926 228 aa21.38■■□□□ 1.01
C9orf3-222ENST00000496567 CNTFP26441 200 aa21.38■■□□□ 1.01
C9orf3-222ENST00000496567 CLCNKAP51800 687 aa21.38■■□□□ 1.01
C9orf3-222ENST00000496567 SF3A2Q15428 464 aaKnown RBP21.38■■□□□ 1.01
C9orf3-222ENST00000496567 RBM20Q5T481 1227 aaKnown RBP21.38■■□□□ 1.01
C9orf3-222ENST00000496567 LGSNQ5TDP6 509 aa21.38■■□□□ 1.01
C9orf3-222ENST00000496567 HECTD2Q5U5R9 776 aa21.38■■□□□ 1.01
C9orf3-222ENST00000496567 UGT3A1Q6NUS8 523 aa21.38■■□□□ 1.01
C9orf3-222ENST00000496567 FBXO38Q6PIJ6 1188 aa21.38■■□□□ 1.01
C9orf3-222ENST00000496567 OTOAQ7RTW8 1153 aa21.38■■□□□ 1.01
C9orf3-222ENST00000496567 GKN2Q86XP6 184 aa21.38■■□□□ 1.01
C9orf3-222ENST00000496567 KRT222Q8N1A0 295 aa21.38■■□□□ 1.01
C9orf3-222ENST00000496567 MINDY1Q8N5J2 469 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms