RNA–Protein interactions for RNA: ENST00000496342.1

RHBDD3-207, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-207ENST00000496342 LOXL2Q9Y4K0 774 aa17.24■□□□□ 0.35
RHBDD3-207ENST00000496342 CFAP20Q9Y6A4 193 aaKnown RBP17.24■□□□□ 0.35
RHBDD3-207ENST00000496342 PRSS21Q9Y6M0 314 aa17.24■□□□□ 0.35
RHBDD3-207ENST00000496342 IGHV5-10-1A0A0J9YXX1 117 aa17.23■□□□□ 0.35
RHBDD3-207ENST00000496342 HEATR9A2RTY3 570 aa17.23■□□□□ 0.35
RHBDD3-207ENST00000496342 FANCGO15287 622 aa17.23■□□□□ 0.35
RHBDD3-207ENST00000496342 TNFSF15O95150 251 aa17.23■□□□□ 0.35
RHBDD3-207ENST00000496342 GOT2P00505 430 aaKnown RBP17.23■□□□□ 0.35
RHBDD3-207ENST00000496342 SLC2A4P14672 509 aa17.23■□□□□ 0.35
RHBDD3-207ENST00000496342 ITPKBP27987 946 aa17.23■□□□□ 0.35
RHBDD3-207ENST00000496342 COILP38432 576 aaPredicted RBP17.23■□□□□ 0.35
RHBDD3-207ENST00000496342 CACNG1Q06432 222 aa17.23■□□□□ 0.35
RHBDD3-207ENST00000496342 DMPKQ09013 629 aa17.23■□□□□ 0.35
RHBDD3-207ENST00000496342 GPS1Q13098 491 aa17.23■□□□□ 0.35
RHBDD3-207ENST00000496342 SEMA3AQ14563 771 aa17.23■□□□□ 0.35
RHBDD3-207ENST00000496342 GSE1Q14687 1217 aa17.23■□□□□ 0.35
RHBDD3-207ENST00000496342 CYP1B1Q16678 543 aa17.23■□□□□ 0.35
RHBDD3-207ENST00000496342 BCL7AQ4VC05 210 aa17.23■□□□□ 0.35
RHBDD3-207ENST00000496342 SNAP47Q5SQN1 464 aa17.23■□□□□ 0.35
RHBDD3-207ENST00000496342 CCDC137Q6PK04 289 aaKnown RBP17.23■□□□□ 0.35
RHBDD3-207ENST00000496342 ABRAXAS1Q6UWZ7 409 aa17.23■□□□□ 0.35
RHBDD3-207ENST00000496342 TRIM48Q8IWZ4 208 aa17.23■□□□□ 0.35
RHBDD3-207ENST00000496342 FBXO39Q8N4B4 442 aa17.23■□□□□ 0.35
RHBDD3-207ENST00000496342 CLDN19Q8N6F1 224 aa17.23■□□□□ 0.35
RHBDD3-207ENST00000496342 HNRNPLLQ8WVV9 542 aaKnown RBP17.23■□□□□ 0.35
RHBDD3-207ENST00000496342 HDAC10Q969S8 669 aa17.23■□□□□ 0.35
RHBDD3-207ENST00000496342 DCUN1D1Q96GG9 259 aa17.23■□□□□ 0.35
RHBDD3-207ENST00000496342 AHCYL2Q96HN2 611 aaKnown RBP17.23■□□□□ 0.35
RHBDD3-207ENST00000496342 RANBP9Q96S59 729 aa17.23■□□□□ 0.35
RHBDD3-207ENST00000496342 STRADBQ9C0K7 418 aa17.23■□□□□ 0.35
RHBDD3-207ENST00000496342 WWP1Q9H0M0 922 aa17.23■□□□□ 0.35
RHBDD3-207ENST00000496342 STN1Q9H668 368 aaKnown RBP17.23■□□□□ 0.35
RHBDD3-207ENST00000496342 SYBUQ9NX95 663 aa17.23■□□□□ 0.35
RHBDD3-207ENST00000496342 ZDHHC3Q9NYG2 299 aa17.23■□□□□ 0.35
RHBDD3-207ENST00000496342 RALYQ9UKM9 306 aaKnown RBP17.23■□□□□ 0.35
RHBDD3-207ENST00000496342 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.23■□□□□ 0.35
RHBDD3-207ENST00000496342 SDK2Q58EX2 2172 aa17.22■□□□□ 0.35
RHBDD3-207ENST00000496342 IGLV3-16A0A075B6K0 115 aa17.22■□□□□ 0.35
RHBDD3-207ENST00000496342 OR5K4A6NMS3 321 aa17.22■□□□□ 0.35
RHBDD3-207ENST00000496342 A8MU76 341 aa17.22■□□□□ 0.35
RHBDD3-207ENST00000496342 PLD2O14939 933 aa17.22■□□□□ 0.35
RHBDD3-207ENST00000496342 PHF2O75151 1096 aa17.22■□□□□ 0.35
RHBDD3-207ENST00000496342 TMEM63AO94886 807 aa17.22■□□□□ 0.35
RHBDD3-207ENST00000496342 GAS8O95995 478 aa17.22■□□□□ 0.35
RHBDD3-207ENST00000496342 VIPP01282 170 aa17.22■□□□□ 0.35
RHBDD3-207ENST00000496342 ATP1B2P14415 290 aaPredicted RBP17.22■□□□□ 0.35
RHBDD3-207ENST00000496342 TYRP1P17643 537 aa17.22■□□□□ 0.35
RHBDD3-207ENST00000496342 VCLP18206 1134 aa17.22■□□□□ 0.35
RHBDD3-207ENST00000496342 XRCC1P18887 633 aaPredicted RBP17.22■□□□□ 0.35
RHBDD3-207ENST00000496342 ADRA1DP25100 572 aa17.22■□□□□ 0.35
RHBDD3-207ENST00000496342 PSMA3P25788 255 aa17.22■□□□□ 0.35
RHBDD3-207ENST00000496342 MGAT1P26572 445 aa17.22■□□□□ 0.35
RHBDD3-207ENST00000496342 PRLHRP49683 370 aa17.22■□□□□ 0.35
RHBDD3-207ENST00000496342 GNG11P61952 73 aa17.22■□□□□ 0.35
RHBDD3-207ENST00000496342 CCDC173Q0VFZ6 552 aa17.22■□□□□ 0.35
RHBDD3-207ENST00000496342 KCNJ11Q14654 390 aa17.22■□□□□ 0.35
RHBDD3-207ENST00000496342 GPR33Q49SQ1 333 aa17.22■□□□□ 0.35
RHBDD3-207ENST00000496342 CES3Q6UWW8 571 aa17.22■□□□□ 0.35
RHBDD3-207ENST00000496342 TMEM26Q6ZUK4 368 aa17.22■□□□□ 0.35
RHBDD3-207ENST00000496342 PPHLN1Q8NEY8 458 aaKnown RBP17.22■□□□□ 0.35
RHBDD3-207ENST00000496342 SPDYE1Q8NFV5 336 aaPredicted RBP17.22■□□□□ 0.35
RHBDD3-207ENST00000496342 OR10G6Q8NH81 332 aa17.22■□□□□ 0.35
RHBDD3-207ENST00000496342 ACTRT1Q8TDG2 376 aa17.22■□□□□ 0.35
RHBDD3-207ENST00000496342 PMEPA1Q969W9 287 aa17.22■□□□□ 0.35
RHBDD3-207ENST00000496342 CXorf40BQ96DE9 158 aa17.22■□□□□ 0.35
RHBDD3-207ENST00000496342 CAPZA3Q96KX2 299 aa17.22■□□□□ 0.35
RHBDD3-207ENST00000496342 RMDN2Q96LZ7 410 aa17.22■□□□□ 0.35
RHBDD3-207ENST00000496342 C19orf43Q9BQ61 176 aa17.22■□□□□ 0.35
RHBDD3-207ENST00000496342 CHRAC1Q9NRG0 131 aa17.22■□□□□ 0.35
RHBDD3-207ENST00000496342 HOMER3Q9NSC5 361 aa17.22■□□□□ 0.35
RHBDD3-207ENST00000496342 OGFRQ9NZT2 677 aa17.22■□□□□ 0.35
RHBDD3-207ENST00000496342 KLHL3Q9UH77 587 aa17.22■□□□□ 0.35
RHBDD3-207ENST00000496342 MGAT4DA6NG13 374 aa17.21■□□□□ 0.35
RHBDD3-207ENST00000496342 DUX1O43812 170 aa17.21■□□□□ 0.35
RHBDD3-207ENST00000496342 DXOO77932 396 aaKnown RBP17.21■□□□□ 0.35
RHBDD3-207ENST00000496342 POLBP06746 335 aa17.21■□□□□ 0.35
RHBDD3-207ENST00000496342 THRAP10827 490 aa17.21■□□□□ 0.35
RHBDD3-207ENST00000496342 CCL4P13236 92 aa17.21■□□□□ 0.35
RHBDD3-207ENST00000496342 TPSB2P20231 275 aa17.21■□□□□ 0.35
RHBDD3-207ENST00000496342 NMBRP28336 390 aa17.21■□□□□ 0.35
RHBDD3-207ENST00000496342 LIMK2P53671 638 aa17.21■□□□□ 0.35
RHBDD3-207ENST00000496342 GFERP55789 205 aa17.21■□□□□ 0.35
RHBDD3-207ENST00000496342 GPR18Q14330 331 aa17.21■□□□□ 0.35
RHBDD3-207ENST00000496342 TPSAB1Q15661 275 aa17.21■□□□□ 0.35
RHBDD3-207ENST00000496342 RPE65Q16518 533 aa17.21■□□□□ 0.35
RHBDD3-207ENST00000496342 SKIDA1Q1XH10 827 aa17.21■□□□□ 0.35
RHBDD3-207ENST00000496342 AGAP9Q5VTM2 703 aa17.21■□□□□ 0.35
RHBDD3-207ENST00000496342 WASH2PQ6VEQ5 465 aa17.21■□□□□ 0.35
RHBDD3-207ENST00000496342 LDB1Q86U70 411 aaPredicted RBP17.21■□□□□ 0.35
RHBDD3-207ENST00000496342 MPP5Q8N3R9 675 aa17.21■□□□□ 0.35
RHBDD3-207ENST00000496342 OR2L2Q8NH16 312 aa17.21■□□□□ 0.35
RHBDD3-207ENST00000496342 SNIP1Q8TAD8 396 aaKnown RBP17.21■□□□□ 0.35
RHBDD3-207ENST00000496342 NCSTNQ92542 709 aa17.21■□□□□ 0.35
RHBDD3-207ENST00000496342 RSC1A1Q92681 617 aa17.21■□□□□ 0.35
RHBDD3-207ENST00000496342 FGF11Q92914 225 aa17.21■□□□□ 0.35
RHBDD3-207ENST00000496342 GRAMD1AQ96CP6 724 aa17.21■□□□□ 0.35
RHBDD3-207ENST00000496342 SLC46A1Q96NT5 459 aa17.21■□□□□ 0.35
RHBDD3-207ENST00000496342 TRIM56Q9BRZ2 755 aaKnown RBP17.21■□□□□ 0.35
RHBDD3-207ENST00000496342 DDX47Q9H0S4 455 aaKnown RBP17.21■□□□□ 0.35
RHBDD3-207ENST00000496342 WASH6PQ9NQA3 447 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms