RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 SNX32Q86XE0 403 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 CPNE9Q8IYJ1 553 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 DEFB107AQ8IZN7 70 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 PGAM4Q8N0Y7 254 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 LSMEM2Q8N112 164 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 NXPE1Q8N323 547 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 TMEM151AQ8N4L1 468 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 ZBTB2Q8N680 514 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 POU5F2Q8N7G0 328 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 SIDT2Q8NBJ9 832 aaKnown RBP6.84□□□□□ -1.31
USP39-219ENST00000496047 CD200R1Q8TD46 325 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 HCAR2Q8TDS4 363 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 TWIST2Q8WVJ9 160 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 SMG7Q92540 1137 aaKnown RBP6.84□□□□□ -1.31
USP39-219ENST00000496047 DLG3Q92796 817 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 UTP4Q969X6 686 aaKnown RBP6.84□□□□□ -1.31
USP39-219ENST00000496047 PTERQ96BW5 349 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 TUBGCP3Q96CW5 907 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 SCRN2Q96FV2 425 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 PDLIM5Q96HC4 596 aaKnown RBP6.84□□□□□ -1.31
USP39-219ENST00000496047 PRR11Q96HE9 360 aaPredicted RBP6.84□□□□□ -1.31
USP39-219ENST00000496047 RPL10LQ96L21 214 aaKnown RBP6.84□□□□□ -1.31
USP39-219ENST00000496047 OR52B2Q96RD2 323 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 CDCA3Q99618 268 aaPredicted RBP6.84□□□□□ -1.31
USP39-219ENST00000496047 C1QTNF3Q9BXJ4 246 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 TRIM15Q9C019 465 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 ZCCHC2Q9C0B9 1178 aaKnown RBP6.84□□□□□ -1.31
USP39-219ENST00000496047 CIPCQ9C0C6 399 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 P2RY12Q9H244 342 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 DYRK4Q9NR20 520 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 SPATS2LQ9NUQ6 558 aaKnown RBP6.84□□□□□ -1.31
USP39-219ENST00000496047 HCFC1R1Q9NWW0 138 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 DUS2Q9NX74 493 aaKnown RBP6.84□□□□□ -1.31
USP39-219ENST00000496047 WWOXQ9NZC7 414 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 KLHL42Q9P2K6 505 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 SUN2Q9UH99 717 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 IL36AQ9UHA7 158 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 G3BP2Q9UN86 482 aaKnown RBP6.84□□□□□ -1.31
USP39-219ENST00000496047 ERVW-1Q9UQF0 538 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 PPIL1Q9Y3C6 166 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 OARD1Q9Y530 152 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.84□□□□□ -1.31
USP39-219ENST00000496047 TRPM6Q9BX84 2022 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 MYO10Q9HD67 2058 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 TRBV5-4A0A0C4DH59 114 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 DYTNA2CJ06 578 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 UPK3BL1B0FP48 263 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 UPK3BL2E5RIL1 263 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 H0Y3Z8 333 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 J3QL48 77 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 K7ERQ8 282 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 PSMD12O00232 456 aaPredicted RBP6.83□□□□□ -1.32
USP39-219ENST00000496047 AIM2O14862 343 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 ANGPT2O15123 496 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 SMAD6O43541 496 aaKnown RBP6.83□□□□□ -1.32
USP39-219ENST00000496047 KLK8O60259 260 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 CCNT2O60583 730 aaKnown RBP6.83□□□□□ -1.32
USP39-219ENST00000496047 RFPL2O75678 378 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 AP2A2O94973 939 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 TRIM16O95361 564 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 CLDN7O95471 211 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 MT-CO1P00395 513 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 OTCP00480 354 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 PRNPP04156 253 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 UGT2B4P06133 528 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 C8GP07360 202 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 SNRPB2P08579 225 aaKnown RBP6.83□□□□□ -1.32
USP39-219ENST00000496047 ANXA5P08758 320 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 ENO2P09104 434 aaPredicted RBP6.83□□□□□ -1.32
USP39-219ENST00000496047 HIST1H2AGP0C0S8 130 aaPredicted RBP6.83□□□□□ -1.32
USP39-219ENST00000496047 LINC00271P0C7V0 271 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 IDO1P14902 403 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 EPCAMP16422 314 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 BPIP17213 487 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 MSH3P20585 1137 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 HIST1H2ADP20671 130 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 ARRB2P32121 409 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 ACADVLP49748 655 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 STK19P49842 368 aaPredicted RBP6.83□□□□□ -1.32
USP39-219ENST00000496047 CCR3P51677 355 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 CCNG1P51959 295 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 DCDC1P59894 354 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 ZXDBP98169 803 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 SLC25A3Q00325 362 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 SLC34A1Q06495 639 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 ELP6Q0PNE2 266 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 SP140Q13342 867 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 MAP7Q14244 749 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 EIF4HQ15056 248 aaKnown RBP6.83□□□□□ -1.32
USP39-219ENST00000496047 OR4D1Q15615 310 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 SWI5Q1ZZU3 235 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 LRIT3Q3SXY7 679 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 SYTL3Q4VX76 610 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 CRTC2Q53ET0 693 aaPredicted RBP6.83□□□□□ -1.32
USP39-219ENST00000496047 PRSS36Q5K4E3 855 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 CDKL4Q5MAI5 379 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 LY6G5CQ5SRR4 150 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 LDLRAP1Q5SW96 308 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 KANK2Q63ZY3 851 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 LRRC66Q68CR7 880 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms