RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 TYW5A2RUC4 315 aaKnown RBP11.06□□□□□ -0.64
CHMP3-209ENST00000494623 H0YJX3 145 aa11.06□□□□□ -0.64
CHMP3-209ENST00000494623 PLOD2O00469 737 aa11.06□□□□□ -0.64
CHMP3-209ENST00000494623 HNRNPRO43390 633 aaKnown RBP11.06□□□□□ -0.64
CHMP3-209ENST00000494623 PGLSO95336 258 aa11.06□□□□□ -0.64
CHMP3-209ENST00000494623 CLDN7O95471 211 aa11.06□□□□□ -0.64
CHMP3-209ENST00000494623 PRAMEF1O95521 474 aa11.06□□□□□ -0.64
CHMP3-209ENST00000494623 S100BP04271 92 aaPredicted RBP11.06□□□□□ -0.64
CHMP3-209ENST00000494623 ZNF7P17097 686 aaPredicted RBP11.06□□□□□ -0.64
CHMP3-209ENST00000494623 PSMA4P25789 261 aaKnown RBP11.06□□□□□ -0.64
CHMP3-209ENST00000494623 OXTRP30559 389 aa11.06□□□□□ -0.64
CHMP3-209ENST00000494623 NAA20P61599 178 aa11.06□□□□□ -0.64
CHMP3-209ENST00000494623 RCAN2Q14206 197 aa11.06□□□□□ -0.64
CHMP3-209ENST00000494623 CYP51A1Q16850 503 aa11.06□□□□□ -0.64
CHMP3-209ENST00000494623 ZNF783Q6ZMS7 281 aa11.06□□□□□ -0.64
CHMP3-209ENST00000494623 GOLGA7Q7Z5G4 137 aa11.06□□□□□ -0.64
CHMP3-209ENST00000494623 SFRP1Q8N474 314 aa11.06□□□□□ -0.64
CHMP3-209ENST00000494623 CBR4Q8N4T8 237 aa11.06□□□□□ -0.64
CHMP3-209ENST00000494623 TMEM199Q8N511 208 aa11.06□□□□□ -0.64
CHMP3-209ENST00000494623 DDI1Q8WTU0 396 aa11.06□□□□□ -0.64
CHMP3-209ENST00000494623 ZNF382Q96SR6 550 aa11.06□□□□□ -0.64
CHMP3-209ENST00000494623 KCTD14Q9BQ13 255 aaPredicted RBP11.06□□□□□ -0.64
CHMP3-209ENST00000494623 ZFYVE1Q9HBF4 777 aa11.06□□□□□ -0.64
CHMP3-209ENST00000494623 INTS7Q9NVH2 962 aaKnown RBP11.06□□□□□ -0.64
CHMP3-209ENST00000494623 NUDT4Q9NZJ9 180 aa11.06□□□□□ -0.64
CHMP3-209ENST00000494623 LEF1Q9UJU2 399 aaPredicted RBP11.06□□□□□ -0.64
CHMP3-209ENST00000494623 USP22Q9UPT9 525 aa11.06□□□□□ -0.64
CHMP3-209ENST00000494623 PRSS21Q9Y6M0 314 aa11.06□□□□□ -0.64
CHMP3-209ENST00000494623 C1orf232A0A0U1RR37 186 aa11.06□□□□□ -0.64
CHMP3-209ENST00000494623 ARHGAP10A1A4S6 786 aa11.06□□□□□ -0.64
CHMP3-209ENST00000494623 SLC25A14O95258 325 aaPredicted RBP11.06□□□□□ -0.64
CHMP3-209ENST00000494623 ADARP55265 1226 aaKnown RBP11.06□□□□□ -0.64
CHMP3-209ENST00000494623 PLIN5Q00G26 463 aa11.06□□□□□ -0.64
CHMP3-209ENST00000494623 GRIK2Q13002 908 aa11.06□□□□□ -0.64
CHMP3-209ENST00000494623 GTF2H2Q13888 395 aa11.06□□□□□ -0.64
CHMP3-209ENST00000494623 AAK1Q2M2I8 961 aa11.06□□□□□ -0.64
CHMP3-209ENST00000494623 DEFB115Q30KQ5 88 aa11.06□□□□□ -0.64
CHMP3-209ENST00000494623 COQ5Q5HYK3 327 aa11.06□□□□□ -0.64
CHMP3-209ENST00000494623 TPGS2Q68CL5 300 aa11.06□□□□□ -0.64
CHMP3-209ENST00000494623 KRT80Q6KB66 452 aa11.06□□□□□ -0.64
CHMP3-209ENST00000494623 PPP4R4Q6NUP7 873 aa11.06□□□□□ -0.64
CHMP3-209ENST00000494623 GTF2H2CQ6P1K8 395 aa11.06□□□□□ -0.64
CHMP3-209ENST00000494623 SLC2A7Q6PXP3 512 aa11.06□□□□□ -0.64
CHMP3-209ENST00000494623 RNF168Q8IYW5 571 aaPredicted RBP11.06□□□□□ -0.64
CHMP3-209ENST00000494623 HJURPQ8NCD3 748 aaPredicted RBP11.06□□□□□ -0.64
CHMP3-209ENST00000494623 OR4F6Q8NGB9 312 aa11.06□□□□□ -0.64
CHMP3-209ENST00000494623 GRIN3AQ8TCU5 1115 aa11.06□□□□□ -0.64
CHMP3-209ENST00000494623 PROKR1Q8TCW9 393 aa11.06□□□□□ -0.64
CHMP3-209ENST00000494623 LKAAEAR1Q8TD35 194 aa11.06□□□□□ -0.64
CHMP3-209ENST00000494623 ADAMTS19Q8TE59 1207 aa11.06□□□□□ -0.64
CHMP3-209ENST00000494623 ALG14Q96F25 216 aa11.06□□□□□ -0.64
CHMP3-209ENST00000494623 C17orf80Q9BSJ5 609 aa11.06□□□□□ -0.64
CHMP3-209ENST00000494623 APOL5Q9BWW9 433 aa11.06□□□□□ -0.64
CHMP3-209ENST00000494623 TRIM54Q9BYV2 358 aa11.06□□□□□ -0.64
CHMP3-209ENST00000494623 NSUN3Q9H649 340 aaKnown RBP11.06□□□□□ -0.64
CHMP3-209ENST00000494623 ZNF334Q9HCZ1 680 aaPredicted RBP11.06□□□□□ -0.64
CHMP3-209ENST00000494623 TMCO1Q9UM00 188 aa11.06□□□□□ -0.64
CHMP3-209ENST00000494623 CPQQ9Y646 472 aa11.06□□□□□ -0.64
CHMP3-209ENST00000494623 COMMD3-BMI1R4GMX3 469 aa11.06□□□□□ -0.64
CHMP3-209ENST00000494623 OR7A17O14581 309 aa11.05□□□□□ -0.64
CHMP3-209ENST00000494623 FFAR2O15552 330 aa11.05□□□□□ -0.64
CHMP3-209ENST00000494623 EEDO75530 441 aaKnown RBP11.05□□□□□ -0.64
CHMP3-209ENST00000494623 SOD2P04179 222 aa11.05□□□□□ -0.64
CHMP3-209ENST00000494623 FASP25445 335 aa11.05□□□□□ -0.64
CHMP3-209ENST00000494623 HSPA7P48741 367 aa11.05□□□□□ -0.64
CHMP3-209ENST00000494623 TXNL4AP83876 142 aaKnown RBP11.05□□□□□ -0.64
CHMP3-209ENST00000494623 BCL2L1Q07817 233 aa11.05□□□□□ -0.64
CHMP3-209ENST00000494623 FOXM1Q08050 763 aa11.05□□□□□ -0.64
CHMP3-209ENST00000494623 MYLK3Q32MK0 819 aa11.05□□□□□ -0.64
CHMP3-209ENST00000494623 PLA2G4EQ3MJ16 856 aa11.05□□□□□ -0.64
CHMP3-209ENST00000494623 PDCD4Q53EL6 469 aaKnown RBP11.05□□□□□ -0.64
CHMP3-209ENST00000494623 LCN8Q6JVE9 175 aa11.05□□□□□ -0.64
CHMP3-209ENST00000494623 NANOGP8Q6NSW7 305 aa11.05□□□□□ -0.64
CHMP3-209ENST00000494623 SBSNQ6UWP8 590 aa11.05□□□□□ -0.64
CHMP3-209ENST00000494623 RALGPS2Q86X27 583 aaPredicted RBP11.05□□□□□ -0.64
CHMP3-209ENST00000494623 KIAA2013Q8IYS2 634 aa11.05□□□□□ -0.64
CHMP3-209ENST00000494623 CMTR2Q8IYT2 770 aaKnown RBP11.05□□□□□ -0.64
CHMP3-209ENST00000494623 SLAIN1Q8ND83 568 aa11.05□□□□□ -0.64
CHMP3-209ENST00000494623 TSPEARQ8WU66 669 aa11.05□□□□□ -0.64
CHMP3-209ENST00000494623 NCSTNQ92542 709 aa11.05□□□□□ -0.64
CHMP3-209ENST00000494623 TRMT2BQ96GJ1 504 aaKnown RBP11.05□□□□□ -0.64
CHMP3-209ENST00000494623 TMEM169Q96HH4 297 aa11.05□□□□□ -0.64
CHMP3-209ENST00000494623 BRINP2Q9C0B6 783 aa11.05□□□□□ -0.64
CHMP3-209ENST00000494623 TNKS2Q9H2K2 1166 aa11.05□□□□□ -0.64
CHMP3-209ENST00000494623 IPPKQ9H8X2 491 aa11.05□□□□□ -0.64
CHMP3-209ENST00000494623 NANOGQ9H9S0 305 aa11.05□□□□□ -0.64
CHMP3-209ENST00000494623 DUS2Q9NX74 493 aaKnown RBP11.05□□□□□ -0.64
CHMP3-209ENST00000494623 STOML2Q9UJZ1 356 aa11.05□□□□□ -0.64
CHMP3-209ENST00000494623 PCDHB1Q9Y5F3 818 aa11.05□□□□□ -0.64
CHMP3-209ENST00000494623 V9GYQ6 96 aa11.05□□□□□ -0.64
CHMP3-209ENST00000494623 SCN5AQ14524 2016 aa11.05□□□□□ -0.64
CHMP3-209ENST00000494623 RNF103-CHMP3A0A140T963 221 aa11.05□□□□□ -0.64
CHMP3-209ENST00000494623 FAM234BA2RU67 622 aa11.05□□□□□ -0.64
CHMP3-209ENST00000494623 VILLO15195 856 aa11.05□□□□□ -0.64
CHMP3-209ENST00000494623 G6PDP11413 515 aa11.05□□□□□ -0.64
CHMP3-209ENST00000494623 HNF1BP35680 557 aa11.05□□□□□ -0.64
CHMP3-209ENST00000494623 GDF5P43026 501 aa11.05□□□□□ -0.64
CHMP3-209ENST00000494623 PIK3CGP48736 1102 aa11.05□□□□□ -0.64
CHMP3-209ENST00000494623 EPHB3P54753 998 aa11.05□□□□□ -0.64
CHMP3-209ENST00000494623 ABRAXAS2Q15018 415 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms