RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 HGSO14964 777 aaPredicted RBP12.99□□□□□ -0.33
ERCC3-209ENST00000494464 CDK14O94921 469 aa12.99□□□□□ -0.33
ERCC3-209ENST00000494464 AGTP01019 485 aa12.99□□□□□ -0.33
ERCC3-209ENST00000494464 FAM153BP0C7A2 387 aa12.99□□□□□ -0.33
ERCC3-209ENST00000494464 JMJD7P0C870 316 aa12.99□□□□□ -0.33
ERCC3-209ENST00000494464 CSF2RBP32927 897 aa12.99□□□□□ -0.33
ERCC3-209ENST00000494464 EPHA4P54764 986 aa12.99□□□□□ -0.33
ERCC3-209ENST00000494464 UCNP55089 124 aa12.99□□□□□ -0.33
ERCC3-209ENST00000494464 TMEM115Q12893 351 aaPredicted RBP12.99□□□□□ -0.33
ERCC3-209ENST00000494464 TRA2AQ13595 282 aaKnown RBP eCLIP12.99□□□□□ -0.336e-7■□□□□ 10.5
ERCC3-209ENST00000494464 GTF2H3Q13889 308 aa12.99□□□□□ -0.33
ERCC3-209ENST00000494464 TRADDQ15628 312 aa12.99□□□□□ -0.33
ERCC3-209ENST00000494464 AMZ1Q400G9 498 aa12.99□□□□□ -0.33
ERCC3-209ENST00000494464 FAM153CQ494X1 144 aa12.99□□□□□ -0.33
ERCC3-209ENST00000494464 LDLRAP1Q5SW96 308 aa12.99□□□□□ -0.33
ERCC3-209ENST00000494464 PHF19Q5T6S3 580 aa12.99□□□□□ -0.33
ERCC3-209ENST00000494464 CRTC3Q6UUV7 619 aa12.99□□□□□ -0.33
ERCC3-209ENST00000494464 ZDHHC24Q6UX98 284 aa12.99□□□□□ -0.33
ERCC3-209ENST00000494464 FAM151BQ6UXP7 276 aa12.99□□□□□ -0.33
ERCC3-209ENST00000494464 SLC9B2Q86UD5 537 aa12.99□□□□□ -0.33
ERCC3-209ENST00000494464 ZNF547Q8IVP9 402 aa12.99□□□□□ -0.33
ERCC3-209ENST00000494464 OR4D9Q8NGE8 314 aa12.99□□□□□ -0.33
ERCC3-209ENST00000494464 C1orf54Q8WWF1 131 aa12.99□□□□□ -0.33
ERCC3-209ENST00000494464 SH3KBP1Q96B97 665 aa12.99□□□□□ -0.33
ERCC3-209ENST00000494464 PKNOX2Q96KN3 472 aa12.99□□□□□ -0.33
ERCC3-209ENST00000494464 FMO2Q99518 471 aa12.99□□□□□ -0.33
ERCC3-209ENST00000494464 SLC38A3Q99624 504 aa12.99□□□□□ -0.33
ERCC3-209ENST00000494464 DPH5Q9H2P9 285 aa12.99□□□□□ -0.33
ERCC3-209ENST00000494464 SEMA6CQ9H3T2 930 aa12.99□□□□□ -0.33
ERCC3-209ENST00000494464 PRORYQ9H606 182 aa12.99□□□□□ -0.33
ERCC3-209ENST00000494464 ARNT2Q9HBZ2 717 aa12.99□□□□□ -0.33
ERCC3-209ENST00000494464 KLC4Q9NSK0 619 aa12.99□□□□□ -0.33
ERCC3-209ENST00000494464 GRHL1Q9NZI5 618 aa12.99□□□□□ -0.33
ERCC3-209ENST00000494464 R3HDM2Q9Y2K5 976 aaKnown RBP12.99□□□□□ -0.33
ERCC3-209ENST00000494464 SSUH2Q9Y2M2 353 aa12.99□□□□□ -0.33
ERCC3-209ENST00000494464 ARL5AQ9Y689 179 aa12.99□□□□□ -0.33
ERCC3-209ENST00000494464 PTPRQQ9UMZ3 2332 aa12.98□□□□□ -0.33
ERCC3-209ENST00000494464 IGHV5-10-1A0A0J9YXX1 117 aa12.98□□□□□ -0.33
ERCC3-209ENST00000494464 LILRA5A6NI73 299 aa12.98□□□□□ -0.33
ERCC3-209ENST00000494464 C2orf81A6NN90 581 aa12.98□□□□□ -0.33
ERCC3-209ENST00000494464 STX7O15400 261 aaKnown RBP12.98□□□□□ -0.33
ERCC3-209ENST00000494464 LIASO43766 372 aa12.98□□□□□ -0.33
ERCC3-209ENST00000494464 DUX1O43812 170 aa12.98□□□□□ -0.33
ERCC3-209ENST00000494464 MTX2O75431 263 aa12.98□□□□□ -0.33
ERCC3-209ENST00000494464 THRAP10827 490 aa12.98□□□□□ -0.33
ERCC3-209ENST00000494464 ZNF7P17097 686 aaPredicted RBP12.98□□□□□ -0.33
ERCC3-209ENST00000494464 LPOP22079 712 aaPredicted RBP12.98□□□□□ -0.33
ERCC3-209ENST00000494464 OAS2P29728 719 aaKnown RBP12.98□□□□□ -0.33
ERCC3-209ENST00000494464 LIMK2P53671 638 aa12.98□□□□□ -0.33
ERCC3-209ENST00000494464 UBE2IP63279 158 aaKnown RBP12.98□□□□□ -0.33
ERCC3-209ENST00000494464 PDE1BQ01064 536 aa12.98□□□□□ -0.33
ERCC3-209ENST00000494464 MSLNQ13421 630 aaPredicted RBP12.98□□□□□ -0.33
ERCC3-209ENST00000494464 C16orf72Q14CZ0 275 aa12.98□□□□□ -0.33
ERCC3-209ENST00000494464 PPP1R7Q15435 360 aa12.98□□□□□ -0.33
ERCC3-209ENST00000494464 CHRNA6Q15825 494 aa12.98□□□□□ -0.33
ERCC3-209ENST00000494464 P3H1Q32P28 736 aa12.98□□□□□ -0.33
ERCC3-209ENST00000494464 HSP90B2PQ58FF3 399 aa12.98□□□□□ -0.33
ERCC3-209ENST00000494464 BROXQ5VW32 411 aa12.98□□□□□ -0.33
ERCC3-209ENST00000494464 KCTD11Q693B1 232 aa12.98□□□□□ -0.33
ERCC3-209ENST00000494464 ZNF574Q6ZN55 896 aaPredicted RBP12.98□□□□□ -0.33
ERCC3-209ENST00000494464 ARHGEF18Q6ZSZ5 1173 aa12.98□□□□□ -0.33
ERCC3-209ENST00000494464 C11orf96Q7Z7L8 435 aa12.98□□□□□ -0.33
ERCC3-209ENST00000494464 OR10G6Q8NH81 332 aa12.98□□□□□ -0.33
ERCC3-209ENST00000494464 GDAP1Q8TB36 358 aa12.98□□□□□ -0.33
ERCC3-209ENST00000494464 ATG4AQ8WYN0 398 aa12.98□□□□□ -0.33
ERCC3-209ENST00000494464 RTP4Q96DX8 246 aa12.98□□□□□ -0.33
ERCC3-209ENST00000494464 CCDC74BQ96LY2 380 aa12.98□□□□□ -0.33
ERCC3-209ENST00000494464 TBL1YQ9BQ87 522 aa12.98□□□□□ -0.33
ERCC3-209ENST00000494464 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.98□□□□□ -0.33
ERCC3-209ENST00000494464 B3GNT4Q9C0J1 378 aa12.98□□□□□ -0.33
ERCC3-209ENST00000494464 OSGEPL1Q9H4B0 414 aa12.98□□□□□ -0.33
ERCC3-209ENST00000494464 EPB41L1Q9H4G0 881 aa12.98□□□□□ -0.33
ERCC3-209ENST00000494464 UCK1Q9HA47 277 aa12.98□□□□□ -0.33
ERCC3-209ENST00000494464 AKAP7Q9P0M2 348 aaPredicted RBP12.98□□□□□ -0.33
ERCC3-209ENST00000494464 WHRNQ9P202 907 aa12.98□□□□□ -0.33
ERCC3-209ENST00000494464 CPNE7Q9UBL6 633 aa12.98□□□□□ -0.33
ERCC3-209ENST00000494464 PISDQ9UG56 409 aa12.98□□□□□ -0.33
ERCC3-209ENST00000494464 SLC23A2Q9UGH3 650 aa12.98□□□□□ -0.33
ERCC3-209ENST00000494464 NEU2Q9Y3R4 380 aa12.98□□□□□ -0.33
ERCC3-209ENST00000494464 H3BQF6 201 aa12.97□□□□□ -0.33
ERCC3-209ENST00000494464 NVLO15381 856 aaKnown RBP12.97□□□□□ -0.33
ERCC3-209ENST00000494464 GPR39O43194 453 aa12.97□□□□□ -0.33
ERCC3-209ENST00000494464 BUD23O43709 281 aaKnown RBP12.97□□□□□ -0.33
ERCC3-209ENST00000494464 SNX2O60749 519 aa12.97□□□□□ -0.33
ERCC3-209ENST00000494464 KCNJ13O60928 360 aa12.97□□□□□ -0.33
ERCC3-209ENST00000494464 PRAMEF1O95521 474 aa12.97□□□□□ -0.33
ERCC3-209ENST00000494464 CRTAMO95727 393 aa12.97□□□□□ -0.33
ERCC3-209ENST00000494464 HGFP14210 728 aa12.97□□□□□ -0.33
ERCC3-209ENST00000494464 VCLP18206 1134 aa12.97□□□□□ -0.33
ERCC3-209ENST00000494464 XRCC1P18887 633 aaPredicted RBP12.97□□□□□ -0.33
ERCC3-209ENST00000494464 ITIH1P19827 911 aa12.97□□□□□ -0.33
ERCC3-209ENST00000494464 RPL21P46778 160 aaKnown RBP12.97□□□□□ -0.33
ERCC3-209ENST00000494464 KCNJ1P48048 391 aa12.97□□□□□ -0.33
ERCC3-209ENST00000494464 TMPRSS3P57727 454 aa12.97□□□□□ -0.33
ERCC3-209ENST00000494464 CFHR1Q03591 330 aa12.97□□□□□ -0.33
ERCC3-209ENST00000494464 DMPKQ09013 629 aa12.97□□□□□ -0.33
ERCC3-209ENST00000494464 OLIG2Q13516 323 aa12.97□□□□□ -0.33
ERCC3-209ENST00000494464 PARP6Q2NL67 630 aa12.97□□□□□ -0.33
ERCC3-209ENST00000494464 PLA2G4EQ3MJ16 856 aa12.97□□□□□ -0.33
ERCC3-209ENST00000494464 GPRC6AQ5T6X5 926 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms