RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 BCKDKO14874 412 aa18.96■□□□□ 0.63
COL27A1-207ENST00000494090 SLC7A4O43246 635 aa18.96■□□□□ 0.63
COL27A1-207ENST00000494090 RNASEH2AO75792 299 aaKnown RBP18.96■□□□□ 0.63
COL27A1-207ENST00000494090 SCELO95171 688 aa18.96■□□□□ 0.63
COL27A1-207ENST00000494090 PIGRP01833 764 aa18.96■□□□□ 0.63
COL27A1-207ENST00000494090 CCNIQ14094 377 aa18.96■□□□□ 0.63
COL27A1-207ENST00000494090 RALGPS1Q5JS13 557 aa18.96■□□□□ 0.63
COL27A1-207ENST00000494090 SPRYD7Q5W111 196 aa18.96■□□□□ 0.63
COL27A1-207ENST00000494090 PRR23CQ6ZRP0 262 aa18.96■□□□□ 0.63
COL27A1-207ENST00000494090 UNC5BQ8IZJ1 945 aa18.96■□□□□ 0.63
COL27A1-207ENST00000494090 ZNF384Q8TF68 577 aa18.96■□□□□ 0.63
COL27A1-207ENST00000494090 PRRG4Q9BZD6 226 aa18.96■□□□□ 0.63
COL27A1-207ENST00000494090 SEC14L3Q9UDX4 400 aa18.96■□□□□ 0.63
COL27A1-207ENST00000494090 CCL16O15467 120 aa18.96■□□□□ 0.63
COL27A1-207ENST00000494090 TRMUO75648 421 aaKnown RBP18.96■□□□□ 0.63
COL27A1-207ENST00000494090 ZBTB11O95625 1053 aaPredicted RBP18.96■□□□□ 0.63
COL27A1-207ENST00000494090 GOT2P00505 430 aaKnown RBP18.96■□□□□ 0.63
COL27A1-207ENST00000494090 ZNF132P52740 706 aa18.96■□□□□ 0.63
COL27A1-207ENST00000494090 IL10RBQ08334 325 aa18.96■□□□□ 0.63
COL27A1-207ENST00000494090 MCFD2Q8NI22 146 aa18.96■□□□□ 0.63
COL27A1-207ENST00000494090 NAT14Q8WUY8 206 aa18.96■□□□□ 0.63
COL27A1-207ENST00000494090 CALML5Q9NZT1 146 aa18.96■□□□□ 0.63
COL27A1-207ENST00000494090 WRAP73Q9P2S5 460 aaPredicted RBP18.96■□□□□ 0.63
COL27A1-207ENST00000494090 MRPS7Q9Y2R9 242 aaKnown RBP18.96■□□□□ 0.63
COL27A1-207ENST00000494090 RICTORQ6R327 1708 aa18.96■□□□□ 0.63
COL27A1-207ENST00000494090 PGRMC2O15173 223 aa18.95■□□□□ 0.62
COL27A1-207ENST00000494090 USP2O75604 605 aaPredicted RBP18.95■□□□□ 0.62
COL27A1-207ENST00000494090 MT-CYBP00156 380 aaPredicted RBP18.95■□□□□ 0.62
COL27A1-207ENST00000494090 PEX2P28328 305 aa18.95■□□□□ 0.62
COL27A1-207ENST00000494090 TRMT10BQ6PF06 316 aaKnown RBP18.95■□□□□ 0.62
COL27A1-207ENST00000494090 CBR4Q8N4T8 237 aa18.95■□□□□ 0.62
COL27A1-207ENST00000494090 ARL10Q8N8L6 244 aa18.95■□□□□ 0.62
COL27A1-207ENST00000494090 HMCESQ96FZ2 354 aa18.95■□□□□ 0.62
COL27A1-207ENST00000494090 HEPHQ9BQS7 1158 aa18.95■□□□□ 0.62
COL27A1-207ENST00000494090 NUSAP1Q9BXS6 441 aaKnown RBP18.95■□□□□ 0.62
COL27A1-207ENST00000494090 FPGTO14772 594 aa18.95■□□□□ 0.62
COL27A1-207ENST00000494090 SPATA31D3P0C874 917 aa18.95■□□□□ 0.62
COL27A1-207ENST00000494090 CTSKP43235 329 aa18.95■□□□□ 0.62
COL27A1-207ENST00000494090 SLC18A1P54219 525 aa18.95■□□□□ 0.62
COL27A1-207ENST00000494090 WDR4P57081 412 aaKnown RBP18.95■□□□□ 0.62
COL27A1-207ENST00000494090 GAD2Q05329 585 aa18.95■□□□□ 0.62
COL27A1-207ENST00000494090 SPATA31D4Q6ZUB0 917 aa18.95■□□□□ 0.62
COL27A1-207ENST00000494090 CHST15Q7LFX5 561 aaPredicted RBP18.95■□□□□ 0.62
COL27A1-207ENST00000494090 CCDC177Q9NQR7 707 aaPredicted RBP18.95■□□□□ 0.62
COL27A1-207ENST00000494090 TAS2R1Q9NYW7 299 aa18.95■□□□□ 0.62
COL27A1-207ENST00000494090 TMEM59LQ9UK28 342 aa18.95■□□□□ 0.62
COL27A1-207ENST00000494090 FABP3P05413 133 aa18.95■□□□□ 0.62
COL27A1-207ENST00000494090 GTF2H2Q13888 395 aa18.95■□□□□ 0.62
COL27A1-207ENST00000494090 ZNF697Q5TEC3 545 aa18.95■□□□□ 0.62
COL27A1-207ENST00000494090 GTF2H2CQ6P1K8 395 aa18.95■□□□□ 0.62
COL27A1-207ENST00000494090 MED27Q6P2C8 311 aa18.95■□□□□ 0.62
COL27A1-207ENST00000494090 SAMD14Q8IZD0 417 aaPredicted RBP18.95■□□□□ 0.62
COL27A1-207ENST00000494090 ZNF516Q92618 1163 aa18.95■□□□□ 0.62
COL27A1-207ENST00000494090 RGS10O43665 173 aa18.95■□□□□ 0.62
COL27A1-207ENST00000494090 LGR5O75473 907 aa18.95■□□□□ 0.62
COL27A1-207ENST00000494090 CA9Q16790 459 aa18.95■□□□□ 0.62
COL27A1-207ENST00000494090 GCNT6Q5T4J0 391 aa18.95■□□□□ 0.62
COL27A1-207ENST00000494090 DDI2Q5TDH0 399 aa18.95■□□□□ 0.62
COL27A1-207ENST00000494090 KIAA0930Q6ICG6 404 aaPredicted RBP18.95■□□□□ 0.62
COL27A1-207ENST00000494090 TMPRSS11AQ6ZMR5 421 aa18.95■□□□□ 0.62
COL27A1-207ENST00000494090 TRPV3Q8NET8 790 aa18.95■□□□□ 0.62
COL27A1-207ENST00000494090 POMPQ9Y244 141 aa18.95■□□□□ 0.62
COL27A1-207ENST00000494090 VIRMAQ69YN4 1812 aaKnown RBP18.95■□□□□ 0.62
COL27A1-207ENST00000494090 SPEF2Q9C093 1822 aa18.95■□□□□ 0.62
COL27A1-207ENST00000494090 INSIG1O15503 277 aa18.94■□□□□ 0.62
COL27A1-207ENST00000494090 PAOXQ6QHF9 649 aa18.94■□□□□ 0.62
COL27A1-207ENST00000494090 TTC29Q8NA56 475 aaPredicted RBP18.94■□□□□ 0.62
COL27A1-207ENST00000494090 PDPRQ8NCN5 879 aa18.94■□□□□ 0.62
COL27A1-207ENST00000494090 LRTOMTQ8WZ04 291 aa18.94■□□□□ 0.62
COL27A1-207ENST00000494090 KCNN2Q9H2S1 579 aa18.94■□□□□ 0.62
COL27A1-207ENST00000494090 DUS2Q9NX74 493 aaKnown RBP18.94■□□□□ 0.62
COL27A1-207ENST00000494090 PHF11Q9UIL8 331 aa18.94■□□□□ 0.62
COL27A1-207ENST00000494090 CACNA1FO60840 1977 aa18.94■□□□□ 0.62
COL27A1-207ENST00000494090 CCDC162PA2VCL2 907 aa18.94■□□□□ 0.62
COL27A1-207ENST00000494090 PLK4O00444 970 aa18.94■□□□□ 0.62
COL27A1-207ENST00000494090 FADS2O95864 444 aaKnown RBP18.94■□□□□ 0.62
COL27A1-207ENST00000494090 SERPINA1P01009 418 aa18.94■□□□□ 0.62
COL27A1-207ENST00000494090 HM13Q8TCT9 377 aa18.94■□□□□ 0.62
COL27A1-207ENST00000494090 FUBP3Q96I24 572 aaKnown RBP eCLIP18.94■□□□□ 0.62
COL27A1-207ENST00000494090 PLK2Q9NYY3 685 aa18.94■□□□□ 0.62
COL27A1-207ENST00000494090 CHST10O43529 356 aa18.94■□□□□ 0.62
COL27A1-207ENST00000494090 TFPIP10646 304 aa18.94■□□□□ 0.62
COL27A1-207ENST00000494090 LAMP2P13473 410 aa18.94■□□□□ 0.62
COL27A1-207ENST00000494090 BCAP31P51572 246 aa18.94■□□□□ 0.62
COL27A1-207ENST00000494090 CAP1Q01518 475 aa18.94■□□□□ 0.62
COL27A1-207ENST00000494090 RIT1Q92963 219 aa18.94■□□□□ 0.62
COL27A1-207ENST00000494090 AZIN2Q96A70 460 aa18.94■□□□□ 0.62
COL27A1-207ENST00000494090 EME2A4GXA9 379 aaPredicted RBP18.94■□□□□ 0.62
COL27A1-207ENST00000494090 LMO2P25791 158 aa18.94■□□□□ 0.62
COL27A1-207ENST00000494090 ACLYP53396 1101 aa18.94■□□□□ 0.62
COL27A1-207ENST00000494090 RFWD3Q6PCD5 774 aa18.94■□□□□ 0.62
COL27A1-207ENST00000494090 GALNT5Q7Z7M9 940 aa18.94■□□□□ 0.62
COL27A1-207ENST00000494090 PARP8Q8N3A8 854 aa18.94■□□□□ 0.62
COL27A1-207ENST00000494090 C5orf34Q96MH7 638 aa18.94■□□□□ 0.62
COL27A1-207ENST00000494090 UBR1Q8IWV7 1749 aa18.94■□□□□ 0.62
COL27A1-207ENST00000494090 PRAMEF1O95521 474 aa18.93■□□□□ 0.62
COL27A1-207ENST00000494090 AHI1Q8N157 1196 aa18.93■□□□□ 0.62
COL27A1-207ENST00000494090 SLC43A3Q8NBI5 491 aa18.93■□□□□ 0.62
COL27A1-207ENST00000494090 BRSK1Q8TDC3 778 aa18.93■□□□□ 0.62
COL27A1-207ENST00000494090 WFIKKN2Q8TEU8 576 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms