RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 TTC9Q92623 222 aa12.38□□□□□ -0.43
HSPG2-212ENST00000493940 RSC1A1Q92681 617 aa12.38□□□□□ -0.43
HSPG2-212ENST00000493940 DNAJC1Q96KC8 554 aaKnown RBP12.38□□□□□ -0.43
HSPG2-212ENST00000493940 CTRCQ99895 268 aa12.38□□□□□ -0.43
HSPG2-212ENST00000493940 ASB8Q9H765 288 aa12.38□□□□□ -0.43
HSPG2-212ENST00000493940 SLC40A1Q9NP59 571 aa12.38□□□□□ -0.43
HSPG2-212ENST00000493940 PKP3Q9Y446 797 aa12.38□□□□□ -0.43
HSPG2-212ENST00000493940 CCDC78A2IDD5 438 aa12.37□□□□□ -0.43
HSPG2-212ENST00000493940 EFCAB7A8K855 629 aa12.37□□□□□ -0.43
HSPG2-212ENST00000493940 PDZK1P1A8MUH7 402 aa12.37□□□□□ -0.43
HSPG2-212ENST00000493940 LIASO43766 372 aa12.37□□□□□ -0.43
HSPG2-212ENST00000493940 PBLDP30039 288 aaPredicted RBP12.37□□□□□ -0.43
HSPG2-212ENST00000493940 DMPKQ09013 629 aa12.37□□□□□ -0.43
HSPG2-212ENST00000493940 TRA2AQ13595 282 aaKnown RBP eCLIP12.37□□□□□ -0.43
HSPG2-212ENST00000493940 SNX1Q13596 522 aa12.37□□□□□ -0.43
HSPG2-212ENST00000493940 GPR18Q14330 331 aa12.37□□□□□ -0.43
HSPG2-212ENST00000493940 RPE65Q16518 533 aa12.37□□□□□ -0.43
HSPG2-212ENST00000493940 CLPPQ16740 277 aaPredicted RBP12.37□□□□□ -0.43
HSPG2-212ENST00000493940 FNBP1LQ5T0N5 605 aa12.37□□□□□ -0.43
HSPG2-212ENST00000493940 MEI1Q5TIA1 1274 aa12.37□□□□□ -0.43
HSPG2-212ENST00000493940 AGAP9Q5VTM2 703 aa12.37□□□□□ -0.43
HSPG2-212ENST00000493940 ANKS6Q68DC2 871 aa12.37□□□□□ -0.43
HSPG2-212ENST00000493940 DUS1LQ6P1R4 473 aaKnown RBP12.37□□□□□ -0.43
HSPG2-212ENST00000493940 WASH2PQ6VEQ5 465 aa12.37□□□□□ -0.43
HSPG2-212ENST00000493940 PIANPQ8IYJ0 282 aa12.37□□□□□ -0.43
HSPG2-212ENST00000493940 RNF10Q8N5U6 811 aaKnown RBP12.37□□□□□ -0.43
HSPG2-212ENST00000493940 OR10G6Q8NH81 332 aa12.37□□□□□ -0.43
HSPG2-212ENST00000493940 TMEM159Q96B96 161 aa12.37□□□□□ -0.43
HSPG2-212ENST00000493940 RTP4Q96DX8 246 aa12.37□□□□□ -0.43
HSPG2-212ENST00000493940 AHCYL2Q96HN2 611 aaKnown RBP12.37□□□□□ -0.43
HSPG2-212ENST00000493940 TAAR9Q96RI9 348 aa12.37□□□□□ -0.43
HSPG2-212ENST00000493940 CCNL2Q96S94 520 aaPredicted RBP12.37□□□□□ -0.43
HSPG2-212ENST00000493940 INSM2Q96T92 566 aaPredicted RBP12.37□□□□□ -0.43
HSPG2-212ENST00000493940 WASH6PQ9NQA3 447 aa12.37□□□□□ -0.43
HSPG2-212ENST00000493940 SMOXQ9NWM0 555 aa12.37□□□□□ -0.43
HSPG2-212ENST00000493940 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.37□□□□□ -0.43
HSPG2-212ENST00000493940 CFAP20Q9Y6A4 193 aaKnown RBP12.37□□□□□ -0.43
HSPG2-212ENST00000493940 PCM1Q15154 2024 aa12.37□□□□□ -0.43
HSPG2-212ENST00000493940 MED13Q9UHV7 2174 aa12.36□□□□□ -0.43
HSPG2-212ENST00000493940 OR51F1A6NGY5 319 aa12.36□□□□□ -0.43
HSPG2-212ENST00000493940 LILRA5A6NI73 299 aa12.36□□□□□ -0.43
HSPG2-212ENST00000493940 OR5K4A6NMS3 321 aa12.36□□□□□ -0.43
HSPG2-212ENST00000493940 C2orf81A6NN90 581 aa12.36□□□□□ -0.43
HSPG2-212ENST00000493940 DUX1O43812 170 aa12.36□□□□□ -0.43
HSPG2-212ENST00000493940 VIPP01282 170 aa12.36□□□□□ -0.43
HSPG2-212ENST00000493940 C9P02748 559 aa12.36□□□□□ -0.43
HSPG2-212ENST00000493940 ZSCAN5DPP0CG00 497 aa12.36□□□□□ -0.43
HSPG2-212ENST00000493940 LIPCP11150 499 aa12.36□□□□□ -0.43
HSPG2-212ENST00000493940 IDSP22304 550 aa12.36□□□□□ -0.43
HSPG2-212ENST00000493940 CETN2P41208 172 aa12.36□□□□□ -0.43
HSPG2-212ENST00000493940 EPHA4P54764 986 aa12.36□□□□□ -0.43
HSPG2-212ENST00000493940 CYP4F2P78329 520 aa12.36□□□□□ -0.43
HSPG2-212ENST00000493940 ITGA9Q13797 1035 aa12.36□□□□□ -0.43
HSPG2-212ENST00000493940 PRPSAP1Q14558 356 aa12.36□□□□□ -0.43
HSPG2-212ENST00000493940 ZNF658BQ4V348 819 aaPredicted RBP12.36□□□□□ -0.43
HSPG2-212ENST00000493940 LDLRAP1Q5SW96 308 aa12.36□□□□□ -0.43
HSPG2-212ENST00000493940 BROXQ5VW32 411 aa12.36□□□□□ -0.43
HSPG2-212ENST00000493940 ZDHHC20Q5W0Z9 365 aa12.36□□□□□ -0.43
HSPG2-212ENST00000493940 METRNLQ641Q3 311 aa12.36□□□□□ -0.43
HSPG2-212ENST00000493940 CCDC81Q6ZN84 652 aa12.36□□□□□ -0.43
HSPG2-212ENST00000493940 TIPARPQ7Z3E1 657 aaKnown RBP12.36□□□□□ -0.43
HSPG2-212ENST00000493940 AMZ2Q86W34 360 aa12.36□□□□□ -0.43
HSPG2-212ENST00000493940 SLC13A5Q86YT5 568 aaPredicted RBP12.36□□□□□ -0.43
HSPG2-212ENST00000493940 LRRC8AQ8IWT6 810 aa12.36□□□□□ -0.43
HSPG2-212ENST00000493940 TTC13Q8NBP0 860 aa12.36□□□□□ -0.43
HSPG2-212ENST00000493940 AGBL5Q8NDL9 886 aa12.36□□□□□ -0.43
HSPG2-212ENST00000493940 OR52K1Q8NGK4 314 aa12.36□□□□□ -0.43
HSPG2-212ENST00000493940 NKD1Q969G9 470 aa12.36□□□□□ -0.43
HSPG2-212ENST00000493940 UCK1Q9HA47 277 aa12.36□□□□□ -0.43
HSPG2-212ENST00000493940 ETNK1Q9HBU6 452 aa12.36□□□□□ -0.43
HSPG2-212ENST00000493940 LZTFL1Q9NQ48 299 aa12.36□□□□□ -0.43
HSPG2-212ENST00000493940 WDR70Q9NW82 654 aa12.36□□□□□ -0.43
HSPG2-212ENST00000493940 SLC39A1Q9NY26 324 aa12.36□□□□□ -0.43
HSPG2-212ENST00000493940 FAM8A1Q9UBU6 413 aa12.36□□□□□ -0.43
HSPG2-212ENST00000493940 MN1Q10571 1320 aaPredicted RBP12.36□□□□□ -0.43
HSPG2-212ENST00000493940 TRBV5-4A0A0C4DH59 114 aa12.35□□□□□ -0.43
HSPG2-212ENST00000493940 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.35□□□□□ -0.43
HSPG2-212ENST00000493940 ERVH48-1M5A8F1 160 aa12.35□□□□□ -0.43
HSPG2-212ENST00000493940 PPFIA2O75334 1257 aa12.35□□□□□ -0.43
HSPG2-212ENST00000493940 UBXN7O94888 489 aa12.35□□□□□ -0.43
HSPG2-212ENST00000493940 AP2A1O95782 977 aa12.35□□□□□ -0.43
HSPG2-212ENST00000493940 ZNF28P17035 718 aa12.35□□□□□ -0.43
HSPG2-212ENST00000493940 PSMA3P25788 255 aa12.35□□□□□ -0.43
HSPG2-212ENST00000493940 CSTF2P33240 577 aaKnown RBP eCLIP12.35□□□□□ -0.43
HSPG2-212ENST00000493940 SH3BP2P78314 561 aa12.35□□□□□ -0.43
HSPG2-212ENST00000493940 MC2RQ01718 297 aa12.35□□□□□ -0.43
HSPG2-212ENST00000493940 LY6DQ14210 128 aa12.35□□□□□ -0.43
HSPG2-212ENST00000493940 POU6F1Q14863 301 aa12.35□□□□□ -0.43
HSPG2-212ENST00000493940 LINC00303Q3SY05 128 aa12.35□□□□□ -0.43
HSPG2-212ENST00000493940 CCDC38Q502W7 563 aa12.35□□□□□ -0.43
HSPG2-212ENST00000493940 CERS6Q6ZMG9 384 aa12.35□□□□□ -0.43
HSPG2-212ENST00000493940 ARHGEF18Q6ZSZ5 1173 aa12.35□□□□□ -0.43
HSPG2-212ENST00000493940 FAM129CQ86XR2 697 aa12.35□□□□□ -0.43
HSPG2-212ENST00000493940 SH3KBP1Q96B97 665 aa12.35□□□□□ -0.43
HSPG2-212ENST00000493940 WBP1Q96G27 269 aa12.35□□□□□ -0.43
HSPG2-212ENST00000493940 CDKN2AIPNLQ96HQ2 116 aa12.35□□□□□ -0.43
HSPG2-212ENST00000493940 C9orf72Q96LT7 481 aa12.35□□□□□ -0.43
HSPG2-212ENST00000493940 ZNF778Q96MU6 729 aa12.35□□□□□ -0.43
HSPG2-212ENST00000493940 TTC25Q96NG3 672 aa12.35□□□□□ -0.43
HSPG2-212ENST00000493940 TGM7Q96PF1 710 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms