RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 HEATR4Q86WZ0 1026 aa12.47□□□□□ -0.41
VPS52-220ENST00000493674 RASGRP3Q8IV61 690 aa12.47□□□□□ -0.41
VPS52-220ENST00000493674 TBC1D3Q8IZP1 549 aaPredicted RBP12.47□□□□□ -0.41
VPS52-220ENST00000493674 FSTL5Q8N475 847 aaPredicted RBP12.47□□□□□ -0.41
VPS52-220ENST00000493674 NKAPQ8N5F7 415 aaKnown RBP12.47□□□□□ -0.41
VPS52-220ENST00000493674 ZBTB2Q8N680 514 aa12.47□□□□□ -0.41
VPS52-220ENST00000493674 OR6Y1Q8NGX8 325 aa12.47□□□□□ -0.41
VPS52-220ENST00000493674 NAT14Q8WUY8 206 aa12.47□□□□□ -0.41
VPS52-220ENST00000493674 FUBP1Q96AE4 644 aaKnown RBP12.47□□□□□ -0.41
VPS52-220ENST00000493674 PTERQ96BW5 349 aa12.47□□□□□ -0.41
VPS52-220ENST00000493674 DCUN1D1Q96GG9 259 aa12.47□□□□□ -0.41
VPS52-220ENST00000493674 LINC00615Q96LM1 132 aaPredicted RBP12.47□□□□□ -0.41
VPS52-220ENST00000493674 MAGEB18Q96M61 343 aa12.47□□□□□ -0.41
VPS52-220ENST00000493674 PRRX2Q99811 253 aa12.47□□□□□ -0.41
VPS52-220ENST00000493674 MRPL57Q9BQC6 102 aaKnown RBP12.47□□□□□ -0.41
VPS52-220ENST00000493674 ZCCHC2Q9C0B9 1178 aaKnown RBP12.47□□□□□ -0.41
VPS52-220ENST00000493674 MRPL46Q9H2W6 279 aaKnown RBP12.47□□□□□ -0.41
VPS52-220ENST00000493674 TFB2MQ9H5Q4 396 aaKnown RBP12.47□□□□□ -0.41
VPS52-220ENST00000493674 SPATS2LQ9NUQ6 558 aaKnown RBP12.47□□□□□ -0.41
VPS52-220ENST00000493674 PSD3Q9NYI0 1048 aa12.47□□□□□ -0.41
VPS52-220ENST00000493674 ATXN10Q9UBB4 475 aa12.47□□□□□ -0.41
VPS52-220ENST00000493674 RUVBL2Q9Y230 463 aaKnown RBP12.47□□□□□ -0.41
VPS52-220ENST00000493674 SNRNP200O75643 2136 aaKnown RBP12.47□□□□□ -0.41
VPS52-220ENST00000493674 GON4LQ3T8J9 2241 aa12.46□□□□□ -0.41
VPS52-220ENST00000493674 WDFY4Q6ZS81 3184 aa12.46□□□□□ -0.41
VPS52-220ENST00000493674 CACNA1HO95180 2353 aa12.46□□□□□ -0.41
VPS52-220ENST00000493674 IGHV1OR15-9A0A0B4J2B8 117 aa12.46□□□□□ -0.41
VPS52-220ENST00000493674 GPR89AB7ZAQ6 455 aa12.46□□□□□ -0.41
VPS52-220ENST00000493674 F8W8V4 182 aa12.46□□□□□ -0.41
VPS52-220ENST00000493674 TK2O00142 265 aa12.46□□□□□ -0.41
VPS52-220ENST00000493674 ZBTB14O43829 449 aa12.46□□□□□ -0.41
VPS52-220ENST00000493674 GPC4O75487 556 aa12.46□□□□□ -0.41
VPS52-220ENST00000493674 FTH1P02794 183 aa12.46□□□□□ -0.41
VPS52-220ENST00000493674 PCCBP05166 539 aa12.46□□□□□ -0.41
VPS52-220ENST00000493674 GSTM1P09488 218 aa12.46□□□□□ -0.41
VPS52-220ENST00000493674 GPR89BP0CG08 455 aa12.46□□□□□ -0.41
VPS52-220ENST00000493674 CBSLP0DN79 551 aa12.46□□□□□ -0.41
VPS52-220ENST00000493674 MYCLP1P12525 358 aaPredicted RBP12.46□□□□□ -0.41
VPS52-220ENST00000493674 CHRM3P20309 590 aa12.46□□□□□ -0.41
VPS52-220ENST00000493674 HOXA6P31267 233 aa12.46□□□□□ -0.41
VPS52-220ENST00000493674 CCR7P32248 378 aa12.46□□□□□ -0.41
VPS52-220ENST00000493674 CBSP35520 551 aa12.46□□□□□ -0.41
VPS52-220ENST00000493674 NUDT1P36639 197 aa12.46□□□□□ -0.41
VPS52-220ENST00000493674 ATP6V0D1P61421 351 aa12.46□□□□□ -0.41
VPS52-220ENST00000493674 GNGT1P63211 74 aa12.46□□□□□ -0.41
VPS52-220ENST00000493674 CBX1P83916 185 aa12.46□□□□□ -0.41
VPS52-220ENST00000493674 IL9RQ01113 521 aa12.46□□□□□ -0.41
VPS52-220ENST00000493674 GSTM4Q03013 218 aa12.46□□□□□ -0.41
VPS52-220ENST00000493674 SGCGQ13326 291 aa12.46□□□□□ -0.41
VPS52-220ENST00000493674 INPP5AQ14642 412 aa12.46□□□□□ -0.41
VPS52-220ENST00000493674 PLEKHS1Q5SXH7 462 aa12.46□□□□□ -0.41
VPS52-220ENST00000493674 KIAA0895LQ68EN5 471 aa12.46□□□□□ -0.41
VPS52-220ENST00000493674 ZYG11AQ6WRX3 759 aa12.46□□□□□ -0.41
VPS52-220ENST00000493674 TRIM74Q86UV6 250 aa12.46□□□□□ -0.41
VPS52-220ENST00000493674 ZNF547Q8IVP9 402 aa12.46□□□□□ -0.41
VPS52-220ENST00000493674 CPNE9Q8IYJ1 553 aa12.46□□□□□ -0.41
VPS52-220ENST00000493674 TMEM145Q8NBT3 493 aa12.46□□□□□ -0.41
VPS52-220ENST00000493674 RHEBL1Q8TAI7 183 aa12.46□□□□□ -0.41
VPS52-220ENST00000493674 GDAP1Q8TB36 358 aa12.46□□□□□ -0.41
VPS52-220ENST00000493674 KLK6Q92876 244 aa12.46□□□□□ -0.41
VPS52-220ENST00000493674 FAM136AQ96C01 138 aa12.46□□□□□ -0.41
VPS52-220ENST00000493674 SGF29Q96ES7 293 aa12.46□□□□□ -0.41
VPS52-220ENST00000493674 TOE1Q96GM8 510 aaKnown RBP12.46□□□□□ -0.41
VPS52-220ENST00000493674 ZNF514Q96K75 400 aaPredicted RBP12.46□□□□□ -0.41
VPS52-220ENST00000493674 TSNARE1Q96NA8 513 aa12.46□□□□□ -0.41
VPS52-220ENST00000493674 ZNF317Q96PQ6 595 aaPredicted RBP12.46□□□□□ -0.41
VPS52-220ENST00000493674 ATOH8Q96SQ7 321 aa12.46□□□□□ -0.41
VPS52-220ENST00000493674 LGR4Q9BXB1 951 aa12.46□□□□□ -0.41
VPS52-220ENST00000493674 PCED1AQ9H1Q7 454 aa12.46□□□□□ -0.41
VPS52-220ENST00000493674 WDR26Q9H7D7 661 aa12.46□□□□□ -0.41
VPS52-220ENST00000493674 COPG2Q9UBF2 871 aa12.46□□□□□ -0.41
VPS52-220ENST00000493674 XPR1Q9UBH6 696 aa12.46□□□□□ -0.41
VPS52-220ENST00000493674 GULP1Q9UBP9 304 aa12.46□□□□□ -0.41
VPS52-220ENST00000493674 MID2Q9UJV3 735 aa12.46□□□□□ -0.41
VPS52-220ENST00000493674 IKZF3Q9UKT9 509 aa12.46□□□□□ -0.41
VPS52-220ENST00000493674 CYP8B1Q9UNU6 501 aa12.46□□□□□ -0.41
VPS52-220ENST00000493674 GPR34Q9UPC5 381 aa12.46□□□□□ -0.41
VPS52-220ENST00000493674 CDYLQ9Y232 598 aa12.46□□□□□ -0.41
VPS52-220ENST00000493674 PRR23AA6NEV1 266 aa12.45□□□□□ -0.42
VPS52-220ENST00000493674 KLF11O14901 512 aa12.45□□□□□ -0.42
VPS52-220ENST00000493674 KPNA5O15131 536 aa12.45□□□□□ -0.42
VPS52-220ENST00000493674 NUAK1O60285 661 aa12.45□□□□□ -0.42
VPS52-220ENST00000493674 TRIM16O95361 564 aa12.45□□□□□ -0.42
VPS52-220ENST00000493674 PDGFBP01127 241 aaPredicted RBP12.45□□□□□ -0.42
VPS52-220ENST00000493674 DCNP07585 359 aaKnown RBP12.45□□□□□ -0.42
VPS52-220ENST00000493674 RBP1P09455 135 aa12.45□□□□□ -0.42
VPS52-220ENST00000493674 FGF3P11487 239 aaPredicted RBP12.45□□□□□ -0.42
VPS52-220ENST00000493674 TDGF1P13385 188 aa12.45□□□□□ -0.42
VPS52-220ENST00000493674 TFEBP19484 476 aa12.45□□□□□ -0.42
VPS52-220ENST00000493674 TAC1P20366 129 aa12.45□□□□□ -0.42
VPS52-220ENST00000493674 HNRNPA2B1P22626 353 aaKnown RBP12.45□□□□□ -0.42
VPS52-220ENST00000493674 CD6P30203 668 aa12.45□□□□□ -0.42
VPS52-220ENST00000493674 MAT2AP31153 395 aaKnown RBP12.45□□□□□ -0.42
VPS52-220ENST00000493674 GLRBP48167 497 aa12.45□□□□□ -0.42
VPS52-220ENST00000493674 KIAA1024LP59773 190 aa12.45□□□□□ -0.42
VPS52-220ENST00000493674 IL2P60568 153 aa12.45□□□□□ -0.42
VPS52-220ENST00000493674 OR4D1Q15615 310 aa12.45□□□□□ -0.42
VPS52-220ENST00000493674 SEPT7Q16181 437 aaKnown RBP12.45□□□□□ -0.42
VPS52-220ENST00000493674 TTLL9Q3SXZ7 439 aa12.45□□□□□ -0.42
VPS52-220ENST00000493674 ACSBG2Q5FVE4 666 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms