RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 TCRBV7S2A1N4TA0A589 114 aa17.13■□□□□ 0.33
SEC13-218ENST00000490283 PRR19A6NJB7 356 aa17.13■□□□□ 0.33
SEC13-218ENST00000490283 OR52A4PA6NMU1 304 aa17.13■□□□□ 0.33
SEC13-218ENST00000490283 B4E171 279 aa17.13■□□□□ 0.33
SEC13-218ENST00000490283 C9orf172C9J069 976 aa17.13■□□□□ 0.33
SEC13-218ENST00000490283 E7EVH7 732 aa17.13■□□□□ 0.33
SEC13-218ENST00000490283 METTL18O95568 372 aa17.13■□□□□ 0.33
SEC13-218ENST00000490283 AP2A1O95782 977 aa17.13■□□□□ 0.33
SEC13-218ENST00000490283 IFNB1P01574 187 aa17.13■□□□□ 0.33
SEC13-218ENST00000490283 FGF3P11487 239 aaPredicted RBP17.13■□□□□ 0.33
SEC13-218ENST00000490283 TSPAN7P41732 249 aa17.13■□□□□ 0.33
SEC13-218ENST00000490283 ATP1A2P50993 1020 aa17.13■□□□□ 0.33
SEC13-218ENST00000490283 ZNF140P52738 457 aaPredicted RBP17.13■□□□□ 0.33
SEC13-218ENST00000490283 CTSCP53634 463 aa17.13■□□□□ 0.33
SEC13-218ENST00000490283 GDF10P55107 478 aa17.13■□□□□ 0.33
SEC13-218ENST00000490283 MANEAQ5SRI9 462 aa17.13■□□□□ 0.33
SEC13-218ENST00000490283 DCAF12Q5T6F0 453 aa17.13■□□□□ 0.33
SEC13-218ENST00000490283 KCTD11Q693B1 232 aa17.13■□□□□ 0.33
SEC13-218ENST00000490283 DENND5AQ6IQ26 1287 aa17.13■□□□□ 0.33
SEC13-218ENST00000490283 SNX20Q7Z614 316 aa17.13■□□□□ 0.33
SEC13-218ENST00000490283 ZFAND4Q86XD8 727 aa17.13■□□□□ 0.33
SEC13-218ENST00000490283 SLC13A5Q86YT5 568 aaPredicted RBP17.13■□□□□ 0.33
SEC13-218ENST00000490283 KLHDC8BQ8IXV7 354 aa17.13■□□□□ 0.33
SEC13-218ENST00000490283 BEND7Q8N7W2 519 aaPredicted RBP17.13■□□□□ 0.33
SEC13-218ENST00000490283 ATG4AQ8WYN0 398 aa17.13■□□□□ 0.33
SEC13-218ENST00000490283 TEFMQ96QE5 360 aaKnown RBP17.13■□□□□ 0.33
SEC13-218ENST00000490283 COPS8Q99627 209 aa17.13■□□□□ 0.33
SEC13-218ENST00000490283 PCDHGA3Q9Y5H0 932 aa17.13■□□□□ 0.33
SEC13-218ENST00000490283 ITPR1Q14643 2758 aa17.13■□□□□ 0.33
SEC13-218ENST00000490283 PTPRQQ9UMZ3 2332 aa17.12■□□□□ 0.33
SEC13-218ENST00000490283 ZFC3H1O60293 1989 aaKnown RBP17.12■□□□□ 0.33
SEC13-218ENST00000490283 SCN8AQ9UQD0 1980 aa17.12■□□□□ 0.33
SEC13-218ENST00000490283 ERI2A8K979 691 aaKnown RBP17.12■□□□□ 0.33
SEC13-218ENST00000490283 K7ENP7 123 aa17.12■□□□□ 0.33
SEC13-218ENST00000490283 ERVH48-1M5A8F1 160 aa17.12■□□□□ 0.33
SEC13-218ENST00000490283 ATXN7O15265 892 aaPredicted RBP17.12■□□□□ 0.33
SEC13-218ENST00000490283 LIASO43766 372 aa17.12■□□□□ 0.33
SEC13-218ENST00000490283 BRAFP15056 766 aa17.12■□□□□ 0.33
SEC13-218ENST00000490283 TYRP1P17643 537 aa17.12■□□□□ 0.33
SEC13-218ENST00000490283 FDFT1P37268 417 aa17.12■□□□□ 0.33
SEC13-218ENST00000490283 POU6F1Q14863 301 aa17.12■□□□□ 0.33
SEC13-218ENST00000490283 GPR33Q49SQ1 333 aa17.12■□□□□ 0.33
SEC13-218ENST00000490283 TAF1BQ53T94 588 aaPredicted RBP17.12■□□□□ 0.33
SEC13-218ENST00000490283 ZRANB3Q5FWF4 1079 aa17.12■□□□□ 0.33
SEC13-218ENST00000490283 MEI1Q5TIA1 1274 aa17.12■□□□□ 0.33
SEC13-218ENST00000490283 KLHL35Q6PF15 583 aa17.12■□□□□ 0.33
SEC13-218ENST00000490283 INO80CQ6PI98 192 aaPredicted RBP17.12■□□□□ 0.33
SEC13-218ENST00000490283 TAB3Q8N5C8 712 aaPredicted RBP17.12■□□□□ 0.33
SEC13-218ENST00000490283 CCDC89Q8N998 374 aa17.12■□□□□ 0.33
SEC13-218ENST00000490283 DNAAF3Q8N9W5 541 aa17.12■□□□□ 0.33
SEC13-218ENST00000490283 ZSCAN1Q8NBB4 408 aa17.12■□□□□ 0.33
SEC13-218ENST00000490283 LSM14AQ8ND56 463 aaKnown RBP17.12■□□□□ 0.33
SEC13-218ENST00000490283 RTP4Q96DX8 246 aa17.12■□□□□ 0.33
SEC13-218ENST00000490283 SGF29Q96ES7 293 aa17.12■□□□□ 0.33
SEC13-218ENST00000490283 VPS37BQ9H9H4 285 aa17.12■□□□□ 0.33
SEC13-218ENST00000490283 SLC40A1Q9NP59 571 aa17.12■□□□□ 0.33
SEC13-218ENST00000490283 SSUH2Q9Y2M2 353 aa17.12■□□□□ 0.33
SEC13-218ENST00000490283 MN1Q10571 1320 aaPredicted RBP17.12■□□□□ 0.33
SEC13-218ENST00000490283 MGAT4DA6NG13 374 aa17.11■□□□□ 0.33
SEC13-218ENST00000490283 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.11■□□□□ 0.33
SEC13-218ENST00000490283 TK2O00142 265 aa17.11■□□□□ 0.33
SEC13-218ENST00000490283 LDB2O43679 373 aa17.11■□□□□ 0.33
SEC13-218ENST00000490283 SLC35G4P0C7Q5 338 aa17.11■□□□□ 0.33
SEC13-218ENST00000490283 TPH1P17752 444 aa17.11■□□□□ 0.33
SEC13-218ENST00000490283 MC4RP32245 332 aa17.11■□□□□ 0.33
SEC13-218ENST00000490283 XIAPP98170 497 aa17.11■□□□□ 0.33
SEC13-218ENST00000490283 LAMB3Q13751 1172 aa17.11■□□□□ 0.33
SEC13-218ENST00000490283 GPR18Q14330 331 aa17.11■□□□□ 0.33
SEC13-218ENST00000490283 NFE2L1Q14494 772 aa17.11■□□□□ 0.33
SEC13-218ENST00000490283 CLCA4Q14CN2 919 aa17.11■□□□□ 0.33
SEC13-218ENST00000490283 PLCL1Q15111 1095 aa17.11■□□□□ 0.33
SEC13-218ENST00000490283 TGIF1Q15583 401 aa17.11■□□□□ 0.33
SEC13-218ENST00000490283 BCL7AQ4VC05 210 aa17.11■□□□□ 0.33
SEC13-218ENST00000490283 PPP1R21Q6ZMI0 780 aa17.11■□□□□ 0.33
SEC13-218ENST00000490283 ZNF662Q6ZS27 426 aa17.11■□□□□ 0.33
SEC13-218ENST00000490283 ARHGAP22Q7Z5H3 698 aa17.11■□□□□ 0.33
SEC13-218ENST00000490283 LRRC8AQ8IWT6 810 aa17.11■□□□□ 0.33
SEC13-218ENST00000490283 NXPE1Q8N323 547 aa17.11■□□□□ 0.33
SEC13-218ENST00000490283 TRIM58Q8NG06 486 aa17.11■□□□□ 0.33
SEC13-218ENST00000490283 OR2L2Q8NH16 312 aa17.11■□□□□ 0.33
SEC13-218ENST00000490283 STYXQ8WUJ0 223 aa17.11■□□□□ 0.33
SEC13-218ENST00000490283 SNRNP27Q8WVK2 155 aaKnown RBP17.11■□□□□ 0.33
SEC13-218ENST00000490283 MAIP1Q8WWC4 291 aa17.11■□□□□ 0.33
SEC13-218ENST00000490283 ZDHHC12Q96GR4 267 aa17.11■□□□□ 0.33
SEC13-218ENST00000490283 DNAJC1Q96KC8 554 aaKnown RBP17.11■□□□□ 0.33
SEC13-218ENST00000490283 ZPBPQ9BS86 351 aa17.11■□□□□ 0.33
SEC13-218ENST00000490283 IMP3Q9NV31 184 aaKnown RBP17.11■□□□□ 0.33
SEC13-218ENST00000490283 OCIAD1Q9NX40 245 aa17.11■□□□□ 0.33
SEC13-218ENST00000490283 ACSL5Q9ULC5 683 aa17.11■□□□□ 0.33
SEC13-218ENST00000490283 PSMD13Q9UNM6 376 aa17.11■□□□□ 0.33
SEC13-218ENST00000490283 WDR37Q9Y2I8 494 aa17.11■□□□□ 0.33
SEC13-218ENST00000490283 TOX3O15405 576 aaPredicted RBP17.1■□□□□ 0.33
SEC13-218ENST00000490283 RASSF9O75901 435 aa17.1■□□□□ 0.33
SEC13-218ENST00000490283 ANKRD34CP0C6C1 535 aa17.1■□□□□ 0.33
SEC13-218ENST00000490283 CA5AP35218 305 aa17.1■□□□□ 0.33
SEC13-218ENST00000490283 CAPZBP47756 277 aa17.1■□□□□ 0.33
SEC13-218ENST00000490283 CDH17Q12864 832 aa17.1■□□□□ 0.33
SEC13-218ENST00000490283 MSLNQ13421 630 aaPredicted RBP17.1■□□□□ 0.33
SEC13-218ENST00000490283 OASLQ15646 514 aaKnown RBP17.1■□□□□ 0.33
SEC13-218ENST00000490283 RPE65Q16518 533 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms