RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 AMZ2Q86W34 360 aa9.55□□□□□ -0.88
TMEM39A-210ENST00000490099 PLXDC1Q8IUK5 500 aa9.55□□□□□ -0.88
TMEM39A-210ENST00000490099 CCDC50Q8IVM0 306 aa9.55□□□□□ -0.88
TMEM39A-210ENST00000490099 SLC25A41Q8N5S1 370 aa9.55□□□□□ -0.88
TMEM39A-210ENST00000490099 ZNF398Q8TD17 642 aa9.55□□□□□ -0.88
TMEM39A-210ENST00000490099 ZFPM2Q8WW38 1151 aa9.55□□□□□ -0.88
TMEM39A-210ENST00000490099 KLHL6Q8WZ60 621 aa9.55□□□□□ -0.88
TMEM39A-210ENST00000490099 HAUS1Q96CS2 278 aa9.55□□□□□ -0.88
TMEM39A-210ENST00000490099 AHCYL2Q96HN2 611 aaKnown RBP9.55□□□□□ -0.88
TMEM39A-210ENST00000490099 ZNF514Q96K75 400 aaPredicted RBP9.55□□□□□ -0.88
TMEM39A-210ENST00000490099 LINC00615Q96LM1 132 aaPredicted RBP9.55□□□□□ -0.88
TMEM39A-210ENST00000490099 C9orf72Q96LT7 481 aa9.55□□□□□ -0.88
TMEM39A-210ENST00000490099 SPATA13Q96N96 652 aa9.55□□□□□ -0.88
TMEM39A-210ENST00000490099 ZPBPQ9BS86 351 aa9.55□□□□□ -0.88
TMEM39A-210ENST00000490099 FEZ2Q9UHY8 353 aaPredicted RBP9.55□□□□□ -0.88
TMEM39A-210ENST00000490099 PKP3Q9Y446 797 aa9.55□□□□□ -0.88
TMEM39A-210ENST00000490099 KLHL33A6NCF5 533 aa9.54□□□□□ -0.88
TMEM39A-210ENST00000490099 H7C0C1 242 aa9.54□□□□□ -0.88
TMEM39A-210ENST00000490099 DDX3YO15523 660 aaKnown RBP9.54□□□□□ -0.88
TMEM39A-210ENST00000490099 GPR39O43194 453 aa9.54□□□□□ -0.88
TMEM39A-210ENST00000490099 LDB2O43679 373 aa9.54□□□□□ -0.88
TMEM39A-210ENST00000490099 UBXN7O94888 489 aa9.54□□□□□ -0.88
TMEM39A-210ENST00000490099 IPO7O95373 1038 aaKnown RBP9.54□□□□□ -0.88
TMEM39A-210ENST00000490099 VIPP01282 170 aa9.54□□□□□ -0.88
TMEM39A-210ENST00000490099 SLC4A1P02730 911 aa9.54□□□□□ -0.88
TMEM39A-210ENST00000490099 ITGB6P18564 788 aa9.54□□□□□ -0.88
TMEM39A-210ENST00000490099 CDC25BP30305 580 aa9.54□□□□□ -0.88
TMEM39A-210ENST00000490099 ATP5OP48047 213 aa9.54□□□□□ -0.88
TMEM39A-210ENST00000490099 ITGA9Q13797 1035 aa9.54□□□□□ -0.88
TMEM39A-210ENST00000490099 LY6DQ14210 128 aa9.54□□□□□ -0.88
TMEM39A-210ENST00000490099 MAP7Q14244 749 aa9.54□□□□□ -0.88
TMEM39A-210ENST00000490099 INSCQ1MX18 579 aa9.54□□□□□ -0.88
TMEM39A-210ENST00000490099 ZNF658BQ4V348 819 aaPredicted RBP9.54□□□□□ -0.88
TMEM39A-210ENST00000490099 AADACL2Q6P093 401 aa9.54□□□□□ -0.88
TMEM39A-210ENST00000490099 FAM151BQ6UXP7 276 aa9.54□□□□□ -0.88
TMEM39A-210ENST00000490099 FAM83HQ6ZRV2 1179 aaPredicted RBP9.54□□□□□ -0.88
TMEM39A-210ENST00000490099 TIPARPQ7Z3E1 657 aaKnown RBP9.54□□□□□ -0.88
TMEM39A-210ENST00000490099 GLT6D1Q7Z4J2 308 aa9.54□□□□□ -0.88
TMEM39A-210ENST00000490099 VASH2Q86V25 355 aa9.54□□□□□ -0.88
TMEM39A-210ENST00000490099 CDKL3Q8IVW4 592 aaPredicted RBP9.54□□□□□ -0.88
TMEM39A-210ENST00000490099 ACRBPQ8NEB7 543 aa9.54□□□□□ -0.88
TMEM39A-210ENST00000490099 SLC35B2Q8TB61 432 aa9.54□□□□□ -0.88
TMEM39A-210ENST00000490099 BLOC1S5Q8TDH9 187 aa9.54□□□□□ -0.88
TMEM39A-210ENST00000490099 UBE2Q2Q8WVN8 375 aa9.54□□□□□ -0.88
TMEM39A-210ENST00000490099 PPP1R2P1Q96PQ5 205 aa9.54□□□□□ -0.88
TMEM39A-210ENST00000490099 BAG1Q99933 345 aaPredicted RBP9.54□□□□□ -0.88
TMEM39A-210ENST00000490099 FICDQ9BVA6 458 aa9.54□□□□□ -0.88
TMEM39A-210ENST00000490099 IGLV3-16A0A075B6K0 115 aa9.53□□□□□ -0.88
TMEM39A-210ENST00000490099 MGAT4DA6NG13 374 aa9.53□□□□□ -0.88
TMEM39A-210ENST00000490099 OR52A4PA6NMU1 304 aa9.53□□□□□ -0.88
TMEM39A-210ENST00000490099 A8MU76 341 aa9.53□□□□□ -0.88
TMEM39A-210ENST00000490099 MIF4GDA9UHW6 222 aaKnown RBP9.53□□□□□ -0.88
TMEM39A-210ENST00000490099 B8ZZF3 427 aa9.53□□□□□ -0.88
TMEM39A-210ENST00000490099 H7C0S8 307 aa9.53□□□□□ -0.88
TMEM39A-210ENST00000490099 AGRPO00253 132 aa9.53□□□□□ -0.88
TMEM39A-210ENST00000490099 STX7O15400 261 aaKnown RBP9.53□□□□□ -0.88
TMEM39A-210ENST00000490099 CAPN5O15484 640 aaPredicted RBP9.53□□□□□ -0.88
TMEM39A-210ENST00000490099 KCNN4O15554 427 aa9.53□□□□□ -0.88
TMEM39A-210ENST00000490099 BUD23O43709 281 aaKnown RBP9.53□□□□□ -0.88
TMEM39A-210ENST00000490099 RAD1O60671 282 aa9.53□□□□□ -0.88
TMEM39A-210ENST00000490099 SRP72O76094 671 aaKnown RBP9.53□□□□□ -0.88
TMEM39A-210ENST00000490099 DLGAP3O95886 979 aa9.53□□□□□ -0.88
TMEM39A-210ENST00000490099 PLA2G2AP14555 144 aa9.53□□□□□ -0.88
TMEM39A-210ENST00000490099 TYRP1P17643 537 aa9.53□□□□□ -0.88
TMEM39A-210ENST00000490099 VCLP18206 1134 aa9.53□□□□□ -0.88
TMEM39A-210ENST00000490099 RPL10P27635 214 aaKnown RBP9.53□□□□□ -0.88
TMEM39A-210ENST00000490099 MAP4P27816 1152 aaKnown RBP9.53□□□□□ -0.88
TMEM39A-210ENST00000490099 PSMB4P28070 264 aa9.53□□□□□ -0.88
TMEM39A-210ENST00000490099 ZNF140P52738 457 aaPredicted RBP9.53□□□□□ -0.88
TMEM39A-210ENST00000490099 GFERP55789 205 aa9.53□□□□□ -0.88
TMEM39A-210ENST00000490099 OLIG2Q13516 323 aa9.53□□□□□ -0.88
TMEM39A-210ENST00000490099 GPR18Q14330 331 aa9.53□□□□□ -0.88
TMEM39A-210ENST00000490099 IL11RAQ14626 422 aa9.53□□□□□ -0.88
TMEM39A-210ENST00000490099 RPE65Q16518 533 aa9.53□□□□□ -0.88
TMEM39A-210ENST00000490099 TBR1Q16650 682 aa9.53□□□□□ -0.88
TMEM39A-210ENST00000490099 PARP6Q2NL67 630 aa9.53□□□□□ -0.88
TMEM39A-210ENST00000490099 BCL7AQ4VC05 210 aa9.53□□□□□ -0.88
TMEM39A-210ENST00000490099 CRTC2Q53ET0 693 aaPredicted RBP9.53□□□□□ -0.88
TMEM39A-210ENST00000490099 CAPRIN2Q6IMN6 1127 aaKnown RBP9.53□□□□□ -0.88
TMEM39A-210ENST00000490099 CEACAM20Q6UY09 585 aa9.53□□□□□ -0.88
TMEM39A-210ENST00000490099 PRSS42Q7Z5A4 293 aa9.53□□□□□ -0.88
TMEM39A-210ENST00000490099 TRAPPC5Q8IUR0 188 aa9.53□□□□□ -0.88
TMEM39A-210ENST00000490099 OR4K2Q8NGD2 314 aa9.53□□□□□ -0.88
TMEM39A-210ENST00000490099 CCDC110Q8TBZ0 833 aa9.53□□□□□ -0.88
TMEM39A-210ENST00000490099 HES6Q96HZ4 224 aa9.53□□□□□ -0.88
TMEM39A-210ENST00000490099 SLC45A3Q96JT2 553 aa9.53□□□□□ -0.88
TMEM39A-210ENST00000490099 FERMT1Q9BQL6 677 aa9.53□□□□□ -0.88
TMEM39A-210ENST00000490099 FSD1LQ9BXM9 530 aa9.53□□□□□ -0.88
TMEM39A-210ENST00000490099 ZCCHC2Q9C0B9 1178 aaKnown RBP9.53□□□□□ -0.88
TMEM39A-210ENST00000490099 OSGEPL1Q9H4B0 414 aa9.53□□□□□ -0.88
TMEM39A-210ENST00000490099 ZNF768Q9H5H4 540 aaKnown RBP9.53□□□□□ -0.88
TMEM39A-210ENST00000490099 APMAPQ9HDC9 416 aa9.53□□□□□ -0.88
TMEM39A-210ENST00000490099 STARD5Q9NSY2 213 aa9.53□□□□□ -0.88
TMEM39A-210ENST00000490099 IMPACTQ9P2X3 320 aa9.53□□□□□ -0.88
TMEM39A-210ENST00000490099 ACSL5Q9ULC5 683 aa9.53□□□□□ -0.88
TMEM39A-210ENST00000490099 DNAJC16Q9Y2G8 782 aa9.53□□□□□ -0.88
TMEM39A-210ENST00000490099 KCTD3Q9Y597 815 aa9.53□□□□□ -0.88
TMEM39A-210ENST00000490099 ARL5AQ9Y689 179 aa9.53□□□□□ -0.88
TMEM39A-210ENST00000490099 TRBV5-4A0A0C4DH59 114 aa9.52□□□□□ -0.89
TMEM39A-210ENST00000490099 A0A0U1RQJ8 604 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms