RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 TRIM21P19474 475 aaKnown RBP7.29□□□□□ -1.24
EXOSC3-206ENST00000489414 ATICP31939 592 aa7.29□□□□□ -1.24
EXOSC3-206ENST00000489414 GKP32189 559 aa7.29□□□□□ -1.24
EXOSC3-206ENST00000489414 TKTL1P51854 596 aa7.29□□□□□ -1.24
EXOSC3-206ENST00000489414 FKBP3Q00688 224 aaKnown RBP7.29□□□□□ -1.24
EXOSC3-206ENST00000489414 MAN2A1Q16706 1144 aa7.29□□□□□ -1.24
EXOSC3-206ENST00000489414 CCDC40Q4G0X9 1142 aa7.29□□□□□ -1.24
EXOSC3-206ENST00000489414 CARD16Q5EG05 197 aa7.29□□□□□ -1.24
EXOSC3-206ENST00000489414 C6orf52Q5T4I8 152 aa7.29□□□□□ -1.24
EXOSC3-206ENST00000489414 E4F1Q66K89 784 aaPredicted RBP7.29□□□□□ -1.24
EXOSC3-206ENST00000489414 SMYD5Q6GMV2 418 aa7.29□□□□□ -1.24
EXOSC3-206ENST00000489414 MTERF4Q7Z6M4 381 aaKnown RBP7.29□□□□□ -1.24
EXOSC3-206ENST00000489414 TTC7BQ86TV6 843 aa7.29□□□□□ -1.24
EXOSC3-206ENST00000489414 PIGZQ86VD9 579 aa7.29□□□□□ -1.24
EXOSC3-206ENST00000489414 UNC93AQ86WB7 457 aa7.29□□□□□ -1.24
EXOSC3-206ENST00000489414 CHSY1Q86X52 802 aa7.29□□□□□ -1.24
EXOSC3-206ENST00000489414 TC2NQ8N9U0 490 aa7.29□□□□□ -1.24
EXOSC3-206ENST00000489414 SIDT2Q8NBJ9 832 aaKnown RBP7.29□□□□□ -1.24
EXOSC3-206ENST00000489414 CPT1BQ92523 772 aa7.29□□□□□ -1.24
EXOSC3-206ENST00000489414 HAS2Q92819 552 aa7.29□□□□□ -1.24
EXOSC3-206ENST00000489414 THAP11Q96EK4 314 aa7.29□□□□□ -1.24
EXOSC3-206ENST00000489414 CEP63Q96MT8 703 aa7.29□□□□□ -1.24
EXOSC3-206ENST00000489414 KCTD15Q96SI1 283 aaPredicted RBP7.29□□□□□ -1.24
EXOSC3-206ENST00000489414 ULBP1Q9BZM6 244 aa7.29□□□□□ -1.24
EXOSC3-206ENST00000489414 UBXN6Q9BZV1 441 aa7.29□□□□□ -1.24
EXOSC3-206ENST00000489414 TSPAN10Q9H1Z9 355 aaPredicted RBP7.29□□□□□ -1.24
EXOSC3-206ENST00000489414 STN1Q9H668 368 aaKnown RBP7.29□□□□□ -1.24
EXOSC3-206ENST00000489414 WDR26Q9H7D7 661 aa7.29□□□□□ -1.24
EXOSC3-206ENST00000489414 PCMTD2Q9NV79 361 aa7.29□□□□□ -1.24
EXOSC3-206ENST00000489414 PLA2G3Q9NZ20 509 aa7.29□□□□□ -1.24
EXOSC3-206ENST00000489414 SEMA5BQ9P283 1151 aa7.29□□□□□ -1.24
EXOSC3-206ENST00000489414 FBXL4Q9UKA2 621 aa7.29□□□□□ -1.24
EXOSC3-206ENST00000489414 DNAJC16Q9Y2G8 782 aa7.29□□□□□ -1.24
EXOSC3-206ENST00000489414 HRH3Q9Y5N1 445 aa7.29□□□□□ -1.24
EXOSC3-206ENST00000489414 CPAMD8Q8IZJ3 1885 aa7.29□□□□□ -1.24
EXOSC3-206ENST00000489414 DNAJC13O75165 2243 aa7.28□□□□□ -1.24
EXOSC3-206ENST00000489414 USP27XA6NNY8 438 aa7.28□□□□□ -1.24
EXOSC3-206ENST00000489414 CLCA1A8K7I4 914 aa7.28□□□□□ -1.24
EXOSC3-206ENST00000489414 C9J4A7 227 aa7.28□□□□□ -1.24
EXOSC3-206ENST00000489414 FAM227AF5H4B4 570 aa7.28□□□□□ -1.24
EXOSC3-206ENST00000489414 CALUO43852 315 aaPredicted RBP7.28□□□□□ -1.24
EXOSC3-206ENST00000489414 FAM13AO94988 1023 aa7.28□□□□□ -1.24
EXOSC3-206ENST00000489414 GOSR1O95249 250 aa7.28□□□□□ -1.24
EXOSC3-206ENST00000489414 MOCS2O96007 188 aaPredicted RBP7.28□□□□□ -1.24
EXOSC3-206ENST00000489414 JCHAINP01591 159 aa7.28□□□□□ -1.24
EXOSC3-206ENST00000489414 MYCLP1P12525 358 aaPredicted RBP7.28□□□□□ -1.24
EXOSC3-206ENST00000489414 SRD5A1P18405 259 aa7.28□□□□□ -1.24
EXOSC3-206ENST00000489414 KRT9P35527 623 aa7.28□□□□□ -1.24
EXOSC3-206ENST00000489414 FOLR3P41439 243 aa7.28□□□□□ -1.24
EXOSC3-206ENST00000489414 PMS1P54277 932 aaKnown RBP7.28□□□□□ -1.24
EXOSC3-206ENST00000489414 TUBB4BP68371 445 aa7.28□□□□□ -1.24
EXOSC3-206ENST00000489414 HSF1Q00613 529 aa7.28□□□□□ -1.24
EXOSC3-206ENST00000489414 KCNA1Q09470 495 aa7.28□□□□□ -1.24
EXOSC3-206ENST00000489414 OLIG2Q13516 323 aa7.28□□□□□ -1.24
EXOSC3-206ENST00000489414 TUBB2AQ13885 445 aa7.28□□□□□ -1.24
EXOSC3-206ENST00000489414 SURF1Q15526 300 aa7.28□□□□□ -1.24
EXOSC3-206ENST00000489414 PTCHD3Q3KNS1 767 aa7.28□□□□□ -1.24
EXOSC3-206ENST00000489414 GHDCQ8N2G8 530 aa7.28□□□□□ -1.24
EXOSC3-206ENST00000489414 RPRMLQ8N4K4 120 aa7.28□□□□□ -1.24
EXOSC3-206ENST00000489414 PCDH20Q8N6Y1 951 aaKnown RBP7.28□□□□□ -1.24
EXOSC3-206ENST00000489414 OR8K1Q8NGG5 319 aa7.28□□□□□ -1.24
EXOSC3-206ENST00000489414 DNAJC19Q96DA6 116 aa7.28□□□□□ -1.24
EXOSC3-206ENST00000489414 SLC39A13Q96H72 371 aa7.28□□□□□ -1.24
EXOSC3-206ENST00000489414 NSMCE3Q96MG7 304 aa7.28□□□□□ -1.24
EXOSC3-206ENST00000489414 TWNKQ96RR1 684 aa7.28□□□□□ -1.24
EXOSC3-206ENST00000489414 CBWD1Q9BRT8 395 aa7.28□□□□□ -1.24
EXOSC3-206ENST00000489414 TUBB2BQ9BVA1 445 aa7.28□□□□□ -1.24
EXOSC3-206ENST00000489414 C2orf49Q9BVC5 232 aaPredicted RBP7.28□□□□□ -1.24
EXOSC3-206ENST00000489414 FRMD8Q9BZ67 464 aaPredicted RBP7.28□□□□□ -1.24
EXOSC3-206ENST00000489414 CEP44Q9C0F1 390 aa7.28□□□□□ -1.24
EXOSC3-206ENST00000489414 ABHD10Q9NUJ1 306 aa7.28□□□□□ -1.24
EXOSC3-206ENST00000489414 PPP2R2CQ9Y2T4 447 aa7.28□□□□□ -1.24
EXOSC3-206ENST00000489414 PTRH2Q9Y3E5 179 aaKnown RBP7.28□□□□□ -1.24
EXOSC3-206ENST00000489414 CADP27708 2225 aa7.28□□□□□ -1.24
EXOSC3-206ENST00000489414 DSCAMO60469 2012 aa7.27□□□□□ -1.25
EXOSC3-206ENST00000489414 IGHV5-51A0A0C4DH38 117 aa7.27□□□□□ -1.25
EXOSC3-206ENST00000489414 GRID2IPA4D2P6 1211 aa7.27□□□□□ -1.25
EXOSC3-206ENST00000489414 NPIPA5E9PKD4 350 aa7.27□□□□□ -1.25
EXOSC3-206ENST00000489414 F5H5T6 163 aa7.27□□□□□ -1.25
EXOSC3-206ENST00000489414 PDE2AO00408 941 aaPredicted RBP7.27□□□□□ -1.25
EXOSC3-206ENST00000489414 CETN3O15182 167 aa7.27□□□□□ -1.25
EXOSC3-206ENST00000489414 KIF5CO60282 957 aa7.27□□□□□ -1.25
EXOSC3-206ENST00000489414 UBXN7O94888 489 aa7.27□□□□□ -1.25
EXOSC3-206ENST00000489414 STATHP02808 62 aa7.27□□□□□ -1.25
EXOSC3-206ENST00000489414 HRGP04196 525 aa7.27□□□□□ -1.25
EXOSC3-206ENST00000489414 GYPCP04921 128 aa7.27□□□□□ -1.25
EXOSC3-206ENST00000489414 UGT2B4P06133 528 aa7.27□□□□□ -1.25
EXOSC3-206ENST00000489414 RPL13P26373 211 aaKnown RBP7.27□□□□□ -1.25
EXOSC3-206ENST00000489414 CYLC1P35663 651 aaPredicted RBP7.27□□□□□ -1.25
EXOSC3-206ENST00000489414 PTH2RP49190 550 aa7.27□□□□□ -1.25
EXOSC3-206ENST00000489414 ETF1P62495 437 aaKnown RBP7.27□□□□□ -1.25
EXOSC3-206ENST00000489414 VWA3BQ502W6 1294 aa7.27□□□□□ -1.25
EXOSC3-206ENST00000489414 ATG9BQ674R7 924 aa7.27□□□□□ -1.25
EXOSC3-206ENST00000489414 SYT10Q6XYQ8 523 aa7.27□□□□□ -1.25
EXOSC3-206ENST00000489414 CERS6Q6ZMG9 384 aa7.27□□□□□ -1.25
EXOSC3-206ENST00000489414 FAM92BQ6ZTR7 304 aa7.27□□□□□ -1.25
EXOSC3-206ENST00000489414 SLC9B2Q86UD5 537 aa7.27□□□□□ -1.25
EXOSC3-206ENST00000489414 TMEM139Q8IV31 216 aa7.27□□□□□ -1.25
EXOSC3-206ENST00000489414 SIAH3Q8IW03 269 aa7.27□□□□□ -1.25
EXOSC3-206ENST00000489414 PELI3Q8N2H9 469 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms