RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 SGF29Q96ES7 293 aa8.97□□□□□ -0.97
HDAC6-232ENST00000489053 ZDHHC12Q96GR4 267 aa8.97□□□□□ -0.97
HDAC6-232ENST00000489053 TGM7Q96PF1 710 aa8.97□□□□□ -0.97
HDAC6-232ENST00000489053 TEFMQ96QE5 360 aaKnown RBP8.97□□□□□ -0.97
HDAC6-232ENST00000489053 CCNL2Q96S94 520 aaPredicted RBP8.97□□□□□ -0.97
HDAC6-232ENST00000489053 RAB6BQ9NRW1 208 aa8.97□□□□□ -0.97
HDAC6-232ENST00000489053 SMOXQ9NWM0 555 aa8.97□□□□□ -0.97
HDAC6-232ENST00000489053 PAK5Q9P286 719 aa8.97□□□□□ -0.97
HDAC6-232ENST00000489053 SLC23A2Q9UGH3 650 aa8.97□□□□□ -0.97
HDAC6-232ENST00000489053 ACSL5Q9ULC5 683 aa8.97□□□□□ -0.97
HDAC6-232ENST00000489053 PSMD13Q9UNM6 376 aa8.97□□□□□ -0.97
HDAC6-232ENST00000489053 R3HDM2Q9Y2K5 976 aaKnown RBP8.97□□□□□ -0.97
HDAC6-232ENST00000489053 DNMT3AQ9Y6K1 912 aaPredicted RBP8.97□□□□□ -0.97
HDAC6-232ENST00000489053 A0A0U1RQJ8 604 aa8.96□□□□□ -0.98
HDAC6-232ENST00000489053 A6NCN8 305 aa8.96□□□□□ -0.98
HDAC6-232ENST00000489053 MGAT4DA6NG13 374 aa8.96□□□□□ -0.98
HDAC6-232ENST00000489053 OR52A4PA6NMU1 304 aa8.96□□□□□ -0.98
HDAC6-232ENST00000489053 IFRD1O00458 451 aaPredicted RBP8.96□□□□□ -0.98
HDAC6-232ENST00000489053 GPR39O43194 453 aa8.96□□□□□ -0.98
HDAC6-232ENST00000489053 MAP3K7O43318 606 aa8.96□□□□□ -0.98
HDAC6-232ENST00000489053 LIASO43766 372 aa8.96□□□□□ -0.98
HDAC6-232ENST00000489053 CEP104O60308 925 aa8.96□□□□□ -0.98
HDAC6-232ENST00000489053 APRTP07741 180 aa8.96□□□□□ -0.98
HDAC6-232ENST00000489053 HOXB3P14651 431 aaPredicted RBP8.96□□□□□ -0.98
HDAC6-232ENST00000489053 TPH1P17752 444 aa8.96□□□□□ -0.98
HDAC6-232ENST00000489053 CSF2RBP32927 897 aa8.96□□□□□ -0.98
HDAC6-232ENST00000489053 PPARGP37231 505 aaPredicted RBP8.96□□□□□ -0.98
HDAC6-232ENST00000489053 RHDQ02161 417 aa8.96□□□□□ -0.98
HDAC6-232ENST00000489053 FOXM1Q08050 763 aa8.96□□□□□ -0.98
HDAC6-232ENST00000489053 KLF1Q13351 362 aaPredicted RBP8.96□□□□□ -0.98
HDAC6-232ENST00000489053 SQSTM1Q13501 440 aa8.96□□□□□ -0.98
HDAC6-232ENST00000489053 PTPRCAPQ14761 206 aa8.96□□□□□ -0.98
HDAC6-232ENST00000489053 SYTL3Q4VX76 610 aa8.96□□□□□ -0.98
HDAC6-232ENST00000489053 KHDC1Q4VXA5 237 aaKnown RBP8.96□□□□□ -0.98
HDAC6-232ENST00000489053 MEI1Q5TIA1 1274 aa8.96□□□□□ -0.98
HDAC6-232ENST00000489053 CEACAM20Q6UY09 585 aa8.96□□□□□ -0.98
HDAC6-232ENST00000489053 WASH2PQ6VEQ5 465 aa8.96□□□□□ -0.98
HDAC6-232ENST00000489053 ZFAND4Q86XD8 727 aa8.96□□□□□ -0.98
HDAC6-232ENST00000489053 NXPE1Q8N323 547 aa8.96□□□□□ -0.98
HDAC6-232ENST00000489053 OTUD6BQ8N6M0 293 aa8.96□□□□□ -0.98
HDAC6-232ENST00000489053 PPHLN1Q8NEY8 458 aaKnown RBP8.96□□□□□ -0.98
HDAC6-232ENST00000489053 SLC35B2Q8TB61 432 aa8.96□□□□□ -0.98
HDAC6-232ENST00000489053 CRELD1Q96HD1 420 aa8.96□□□□□ -0.98
HDAC6-232ENST00000489053 DNAJC1Q96KC8 554 aaKnown RBP8.96□□□□□ -0.98
HDAC6-232ENST00000489053 ARHGAP9Q9BRR9 750 aa8.96□□□□□ -0.98
HDAC6-232ENST00000489053 ZPBPQ9BS86 351 aa8.96□□□□□ -0.98
HDAC6-232ENST00000489053 TBC1D10AQ9BXI6 508 aa8.96□□□□□ -0.98
HDAC6-232ENST00000489053 FAM96AQ9H5X1 160 aa8.96□□□□□ -0.98
HDAC6-232ENST00000489053 PRORYQ9H606 182 aa8.96□□□□□ -0.98
HDAC6-232ENST00000489053 UCK1Q9HA47 277 aa8.96□□□□□ -0.98
HDAC6-232ENST00000489053 CPNE5Q9HCH3 593 aa8.96□□□□□ -0.98
HDAC6-232ENST00000489053 WASH6PQ9NQA3 447 aa8.96□□□□□ -0.98
HDAC6-232ENST00000489053 HOMER3Q9NSC5 361 aa8.96□□□□□ -0.98
HDAC6-232ENST00000489053 PIH1D1Q9NWS0 290 aaKnown RBP8.96□□□□□ -0.98
HDAC6-232ENST00000489053 ANAPC5Q9UJX4 755 aa8.96□□□□□ -0.98
HDAC6-232ENST00000489053 KCTD3Q9Y597 815 aa8.96□□□□□ -0.98
HDAC6-232ENST00000489053 PCYT1BQ9Y5K3 369 aaPredicted RBP8.96□□□□□ -0.98
HDAC6-232ENST00000489053 HEBP2Q9Y5Z4 205 aa8.96□□□□□ -0.98
HDAC6-232ENST00000489053 COLEC10Q9Y6Z7 277 aa8.96□□□□□ -0.98
HDAC6-232ENST00000489053 RP1P56715 2156 aa8.95□□□□□ -0.98
HDAC6-232ENST00000489053 A0A1W2PNU3 283 aaPredicted RBP8.95□□□□□ -0.98
HDAC6-232ENST00000489053 TCRBV7S2A1N4TA0A589 114 aa8.95□□□□□ -0.98
HDAC6-232ENST00000489053 CCDC78A2IDD5 438 aa8.95□□□□□ -0.98
HDAC6-232ENST00000489053 HEATR9A2RTY3 570 aa8.95□□□□□ -0.98
HDAC6-232ENST00000489053 B4E171 279 aa8.95□□□□□ -0.98
HDAC6-232ENST00000489053 AP3B1O00203 1094 aa8.95□□□□□ -0.98
HDAC6-232ENST00000489053 QSOX1O00391 747 aa8.95□□□□□ -0.98
HDAC6-232ENST00000489053 POLR1CO15160 346 aaPredicted RBP8.95□□□□□ -0.98
HDAC6-232ENST00000489053 ZSCAN12O43309 604 aa8.95□□□□□ -0.98
HDAC6-232ENST00000489053 METTL18O95568 372 aa8.95□□□□□ -0.98
HDAC6-232ENST00000489053 FGGP02679 453 aa8.95□□□□□ -0.98
HDAC6-232ENST00000489053 POLBP06746 335 aa8.95□□□□□ -0.98
HDAC6-232ENST00000489053 CCL4P13236 92 aa8.95□□□□□ -0.98
HDAC6-232ENST00000489053 ATP1B2P14415 290 aaPredicted RBP8.95□□□□□ -0.98
HDAC6-232ENST00000489053 SLC19A1P41440 591 aa8.95□□□□□ -0.98
HDAC6-232ENST00000489053 TSPAN7P41732 249 aa8.95□□□□□ -0.98
HDAC6-232ENST00000489053 CAPZBP47756 277 aa8.95□□□□□ -0.98
HDAC6-232ENST00000489053 SEPHS1P49903 392 aa8.95□□□□□ -0.98
HDAC6-232ENST00000489053 ZNF140P52738 457 aaPredicted RBP8.95□□□□□ -0.98
HDAC6-232ENST00000489053 CTSCP53634 463 aa8.95□□□□□ -0.98
HDAC6-232ENST00000489053 GDF10P55107 478 aa8.95□□□□□ -0.98
HDAC6-232ENST00000489053 UBE2IP63279 158 aaKnown RBP8.95□□□□□ -0.98
HDAC6-232ENST00000489053 BASP1P80723 227 aaKnown RBP8.95□□□□□ -0.98
HDAC6-232ENST00000489053 CACNG1Q06432 222 aa8.95□□□□□ -0.98
HDAC6-232ENST00000489053 PRKAA1Q13131 559 aa8.95□□□□□ -0.98
HDAC6-232ENST00000489053 CLN3Q13286 438 aa8.95□□□□□ -0.98
HDAC6-232ENST00000489053 GPR18Q14330 331 aa8.95□□□□□ -0.98
HDAC6-232ENST00000489053 NFE2L1Q14494 772 aa8.95□□□□□ -0.98
HDAC6-232ENST00000489053 ABRAXAS1Q6UWZ7 409 aa8.95□□□□□ -0.98
HDAC6-232ENST00000489053 C4orf22Q6V702 233 aa8.95□□□□□ -0.98
HDAC6-232ENST00000489053 ZNF574Q6ZN55 896 aaPredicted RBP8.95□□□□□ -0.98
HDAC6-232ENST00000489053 NLRP9Q7RTR0 991 aa8.95□□□□□ -0.98
HDAC6-232ENST00000489053 TMPRSS9Q7Z410 1059 aa8.95□□□□□ -0.98
HDAC6-232ENST00000489053 HOOK3Q86VS8 718 aa8.95□□□□□ -0.98
HDAC6-232ENST00000489053 ZNF547Q8IVP9 402 aa8.95□□□□□ -0.98
HDAC6-232ENST00000489053 CFAP206Q8IYR0 622 aa8.95□□□□□ -0.98
HDAC6-232ENST00000489053 OR6P1Q8NGX9 317 aa8.95□□□□□ -0.98
HDAC6-232ENST00000489053 GSDMBQ8TAX9 411 aa8.95□□□□□ -0.98
HDAC6-232ENST00000489053 STYXQ8WUJ0 223 aa8.95□□□□□ -0.98
HDAC6-232ENST00000489053 JPH3Q8WXH2 748 aaPredicted RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms