RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 FASTKD3Q14CZ7 662 aaKnown RBP9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 KCTD19Q17RG1 926 aaPredicted RBP9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 MSS51Q4VC12 460 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 TEX44Q53QW1 395 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 BROXQ5VW32 411 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 ERAP2Q6P179 960 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 PNCKQ6P2M8 343 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 INO80CQ6PI98 192 aaPredicted RBP9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 BRAT1Q6PJG6 821 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 OGFOD3Q6PK18 319 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 IGF2-ASQ6U949 168 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 ZNF574Q6ZN55 896 aaPredicted RBP9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 DPPA4Q7L190 304 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 RAB11FIP2Q7L804 512 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 PID1Q7Z2X4 250 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 CLEC14AQ86T13 490 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 ZNF605Q86T29 641 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 LINC00523Q86TU6 105 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 EXOC3L1Q86VI1 746 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 CAND1Q86VP6 1230 aaKnown RBP9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 ZFAND4Q86XD8 727 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 GKN2Q86XP6 184 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 KLHDC8BQ8IXV7 354 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 ZNF567Q8N184 647 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 ATPAF2Q8N5M1 289 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 EXD3Q8N9H8 876 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 OR56A4Q8NGH8 313 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 PDCD6IPQ8WUM4 868 aaKnown RBP9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 GLMNQ92990 594 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 NAT6Q93015 286 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 PMEPA1Q969W9 287 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 SGSM3Q96HU1 749 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 TBATAQ96M53 351 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 COQ10AQ96MF6 247 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 GFM1Q96RP9 751 aaKnown RBP9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 TUBGCP5Q96RT8 1024 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 EBNA1BP2Q99848 306 aaKnown RBP9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 DPH1Q9BZG8 443 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 GBA3Q9H227 469 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 SEMA6CQ9H3T2 930 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 ATP13A3Q9H7F0 1226 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 RDH14Q9HBH5 336 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 SLC24A3Q9HC58 644 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 INTS9Q9NV88 658 aaKnown RBP9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 EVA1BQ9NVM1 165 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 HAUS2Q9NVX0 235 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 FOXJ2Q9P0K8 574 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 PISDQ9UG56 409 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 ZC3H7BQ9UGR2 993 aaKnown RBP9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 CD84Q9UIB8 345 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 ZNF180Q9UJW8 692 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 AAR2Q9Y312 384 aaKnown RBP9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 PCYT1BQ9Y5K3 369 aaPredicted RBP9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 DGKBQ9Y6T7 804 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 ARHGEF17Q96PE2 2063 aaPredicted RBP9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 UNC13CQ8NB66 2214 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 TRBV23OR9-2A0A075B6M9 112 aa9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 PRAMEF33A0A0G2JMD5 474 aa9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 IQANK1A0A1B0GTG1 560 aa9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 GMNCA6NCL1 334 aa9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 NPIPB15A6NHN6 443 aaPredicted RBP9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 ERVH48-1M5A8F1 160 aa9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 TOR1BO14657 336 aa9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 MATN3O15232 486 aa9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 PRPF4O43172 522 aaKnown RBP eCLIP9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 MAFKO60675 156 aa9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 PRAMEF10O60809 474 aa9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 ANXA9O76027 345 aa9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 AP2A1O95782 977 aa9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 FGF1P05230 155 aa9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 CEACAM5P06731 702 aa9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 CCL4P13236 92 aa9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 MPSTP25325 297 aa9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 CNTFP26441 200 aa9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 HTR1BP28222 390 aa9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 SERPINA4P29622 427 aa9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 TRIM23P36406 574 aa9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 NPY2RP49146 381 aa9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 SERPINB9P50453 376 aa9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 BLKP51451 505 aa9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 ARSDP51689 593 aa9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 INHBCP55103 352 aa9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 KIAA1024LP59773 190 aa9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 CYP4F2P78329 520 aa9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 NFKB2Q00653 900 aa9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 ZFP36L1Q07352 338 aaKnown RBP9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 C16orf72Q14CZ0 275 aa9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 LINC00303Q3SY05 128 aa9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 AMZ1Q400G9 498 aa9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 NKAIN2Q5VXU1 208 aa9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 STEAP4Q687X5 459 aa9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 LVRNQ6Q4G3 990 aa9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 Q6ZVL8 140 aa9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 USP53Q70EK8 1073 aa9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 SPRED1Q7Z699 444 aa9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 TRIM74Q86UV6 250 aa9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 VASH2Q86V25 355 aa9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 TRABD2AQ86V40 505 aa9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 ANKMY2Q8IV38 441 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms