RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 WASHC5Q12768 1159 aa4.44□□□□□ -1.7
VPS13A-211ENST00000484581 MELKQ14680 651 aa4.44□□□□□ -1.7
VPS13A-211ENST00000484581 INPP5JQ15735 1006 aaPredicted RBP4.44□□□□□ -1.7
VPS13A-211ENST00000484581 DECR1Q16698 335 aa4.44□□□□□ -1.7
VPS13A-211ENST00000484581 SYT16Q17RD7 645 aa4.44□□□□□ -1.7
VPS13A-211ENST00000484581 TTC31Q49AM3 519 aaPredicted RBP4.44□□□□□ -1.7
VPS13A-211ENST00000484581 KLHL26Q53HC5 615 aa4.44□□□□□ -1.7
VPS13A-211ENST00000484581 SHEQ5VZ18 495 aa4.44□□□□□ -1.7
VPS13A-211ENST00000484581 ZDHHC20Q5W0Z9 365 aa4.44□□□□□ -1.7
VPS13A-211ENST00000484581 FAM91A1Q658Y4 838 aa4.44□□□□□ -1.7
VPS13A-211ENST00000484581 KCTD18Q6PI47 426 aaPredicted RBP4.44□□□□□ -1.7
VPS13A-211ENST00000484581 CNSTQ6PJW8 725 aa4.44□□□□□ -1.7
VPS13A-211ENST00000484581 ZNF782Q6ZMW2 699 aaPredicted RBP4.44□□□□□ -1.7
VPS13A-211ENST00000484581 GBP6Q6ZN66 633 aa4.44□□□□□ -1.7
VPS13A-211ENST00000484581 NRROSQ86YC3 692 aa4.44□□□□□ -1.7
VPS13A-211ENST00000484581 BEST3Q8N1M1 668 aa4.44□□□□□ -1.7
VPS13A-211ENST00000484581 RASGEF1CQ8N431 466 aa4.44□□□□□ -1.7
VPS13A-211ENST00000484581 SLC38A9Q8NBW4 561 aa4.44□□□□□ -1.7
VPS13A-211ENST00000484581 PAPD5Q8NDF8 572 aaKnown RBP4.44□□□□□ -1.7
VPS13A-211ENST00000484581 ENGASEQ8NFI3 743 aa4.44□□□□□ -1.7
VPS13A-211ENST00000484581 TBC1D16Q8TBP0 767 aa4.44□□□□□ -1.7
VPS13A-211ENST00000484581 TAAR8Q969N4 342 aa4.44□□□□□ -1.7
VPS13A-211ENST00000484581 HES6Q96HZ4 224 aa4.44□□□□□ -1.7
VPS13A-211ENST00000484581 MUS81Q96NY9 551 aa4.44□□□□□ -1.7
VPS13A-211ENST00000484581 SIGLEC11Q96RL6 698 aa4.44□□□□□ -1.7
VPS13A-211ENST00000484581 SEPHS2Q99611 448 aa4.44□□□□□ -1.7
VPS13A-211ENST00000484581 GFI1Q99684 422 aa4.44□□□□□ -1.7
VPS13A-211ENST00000484581 OLFM1Q99784 485 aa4.44□□□□□ -1.7
VPS13A-211ENST00000484581 FZD8Q9H461 694 aa4.44□□□□□ -1.7
VPS13A-211ENST00000484581 MRPL44Q9H9J2 332 aaKnown RBP4.44□□□□□ -1.7
VPS13A-211ENST00000484581 ERAP1Q9NZ08 941 aa4.44□□□□□ -1.7
VPS13A-211ENST00000484581 MSRB1Q9NZV6 116 aa4.44□□□□□ -1.7
VPS13A-211ENST00000484581 HEY2Q9UBP5 337 aa4.44□□□□□ -1.7
VPS13A-211ENST00000484581 ARMCX3Q9UH62 379 aaPredicted RBP4.44□□□□□ -1.7
VPS13A-211ENST00000484581 CDC14AQ9UNH5 594 aa4.44□□□□□ -1.7
VPS13A-211ENST00000484581 ARHGEF17Q96PE2 2063 aaPredicted RBP4.43□□□□□ -1.7
VPS13A-211ENST00000484581 SLC33A1O00400 549 aaPredicted RBP4.43□□□□□ -1.7
VPS13A-211ENST00000484581 PTGESO14684 152 aa4.43□□□□□ -1.7
VPS13A-211ENST00000484581 SPINT2O43291 252 aa4.43□□□□□ -1.7
VPS13A-211ENST00000484581 LDB2O43679 373 aa4.43□□□□□ -1.7
VPS13A-211ENST00000484581 SSX4O60224 188 aa4.43□□□□□ -1.7
VPS13A-211ENST00000484581 ATG13O75143 517 aa4.43□□□□□ -1.7
VPS13A-211ENST00000484581 DANCRP0C864 163 aa4.43□□□□□ -1.7
VPS13A-211ENST00000484581 KELP23276 732 aa4.43□□□□□ -1.7
VPS13A-211ENST00000484581 HRH2P25021 359 aa4.43□□□□□ -1.7
VPS13A-211ENST00000484581 CASP3P42574 277 aa4.43□□□□□ -1.7
VPS13A-211ENST00000484581 RASSF2P50749 326 aa4.43□□□□□ -1.7
VPS13A-211ENST00000484581 SELENOVP59797 346 aa4.43□□□□□ -1.7
VPS13A-211ENST00000484581 HNRNPKP61978 463 aaKnown RBP eCLIP4.43□□□□□ -1.7
VPS13A-211ENST00000484581 ASIC1P78348 528 aa4.43□□□□□ -1.7
VPS13A-211ENST00000484581 CDK3Q00526 305 aa4.43□□□□□ -1.7
VPS13A-211ENST00000484581 PPATQ06203 517 aa4.43□□□□□ -1.7
VPS13A-211ENST00000484581 ACTN3Q08043 901 aaPredicted RBP4.43□□□□□ -1.7
VPS13A-211ENST00000484581 GAGE2BQ13066 116 aa4.43□□□□□ -1.7
VPS13A-211ENST00000484581 RCN2Q14257 317 aa4.43□□□□□ -1.7
VPS13A-211ENST00000484581 ZNF284Q2VY69 593 aa4.43□□□□□ -1.7
VPS13A-211ENST00000484581 GAGE2EQ4V326 116 aa4.43□□□□□ -1.7
VPS13A-211ENST00000484581 PARP10Q53GL7 1025 aa4.43□□□□□ -1.7
VPS13A-211ENST00000484581 Q5PR19 223 aa4.43□□□□□ -1.7
VPS13A-211ENST00000484581 RNASEH2BQ5TBB1 312 aaKnown RBP4.43□□□□□ -1.7
VPS13A-211ENST00000484581 ZNF626Q68DY1 528 aa4.43□□□□□ -1.7
VPS13A-211ENST00000484581 GAGE2AQ6NT46 116 aa4.43□□□□□ -1.7
VPS13A-211ENST00000484581 B3GNT6Q6ZMB0 384 aa4.43□□□□□ -1.7
VPS13A-211ENST00000484581 ZNF66Q6ZN08 573 aa4.43□□□□□ -1.7
VPS13A-211ENST00000484581 C15orf39Q6ZRI6 1047 aa4.43□□□□□ -1.7
VPS13A-211ENST00000484581 ZBTB49Q6ZSB9 765 aa4.43□□□□□ -1.7
VPS13A-211ENST00000484581 SPATA21Q7Z572 469 aa4.43□□□□□ -1.7
VPS13A-211ENST00000484581 ZNF619Q8N2I2 560 aa4.43□□□□□ -1.7
VPS13A-211ENST00000484581 GCSAMQ8N6F7 178 aa4.43□□□□□ -1.7
VPS13A-211ENST00000484581 NHLRC2Q8NBF2 726 aa4.43□□□□□ -1.7
VPS13A-211ENST00000484581 SLC4A11Q8NBS3 891 aa4.43□□□□□ -1.7
VPS13A-211ENST00000484581 TEKT1Q969V4 418 aa4.43□□□□□ -1.7
VPS13A-211ENST00000484581 SLAMF9Q96A28 289 aa4.43□□□□□ -1.7
VPS13A-211ENST00000484581 ORAI1Q96D31 301 aa4.43□□□□□ -1.7
VPS13A-211ENST00000484581 PDLIM5Q96HC4 596 aaKnown RBP4.43□□□□□ -1.7
VPS13A-211ENST00000484581 GRAMD2BQ96HH9 432 aa4.43□□□□□ -1.7
VPS13A-211ENST00000484581 FCRL4Q96PJ5 515 aa4.43□□□□□ -1.7
VPS13A-211ENST00000484581 SLC22A12Q96S37 553 aa4.43□□□□□ -1.7
VPS13A-211ENST00000484581 UTP14AQ9BVJ6 771 aaKnown RBP4.43□□□□□ -1.7
VPS13A-211ENST00000484581 WNT5BQ9H1J7 359 aa4.43□□□□□ -1.7
VPS13A-211ENST00000484581 CNGB3Q9NQW8 809 aa4.43□□□□□ -1.7
VPS13A-211ENST00000484581 GAGE2DQ9UEU5 116 aa4.43□□□□□ -1.7
VPS13A-211ENST00000484581 MOSPD1Q9UJG1 213 aa4.43□□□□□ -1.7
VPS13A-211ENST00000484581 ODF2LQ9ULJ1 636 aa4.43□□□□□ -1.7
VPS13A-211ENST00000484581 SNX7Q9UNH6 387 aa4.43□□□□□ -1.7
VPS13A-211ENST00000484581 NME7Q9Y5B8 376 aa4.43□□□□□ -1.7
VPS13A-211ENST00000484581 B4DGG1 531 aa4.42□□□□□ -1.7
VPS13A-211ENST00000484581 ZNF814B7Z6K7 855 aa4.42□□□□□ -1.7
VPS13A-211ENST00000484581 RTCAO00442 366 aaKnown RBP4.42□□□□□ -1.7
VPS13A-211ENST00000484581 HS3ST1O14792 307 aa4.42□□□□□ -1.7
VPS13A-211ENST00000484581 SLC16A5O15375 505 aa4.42□□□□□ -1.7
VPS13A-211ENST00000484581 KCNN4O15554 427 aa4.42□□□□□ -1.7
VPS13A-211ENST00000484581 TLR2O60603 784 aa4.42□□□□□ -1.7
VPS13A-211ENST00000484581 KERAO60938 352 aa4.42□□□□□ -1.7
VPS13A-211ENST00000484581 RTN2O75298 545 aa4.42□□□□□ -1.7
VPS13A-211ENST00000484581 MED24O75448 989 aa4.42□□□□□ -1.7
VPS13A-211ENST00000484581 BCAR3O75815 825 aa4.42□□□□□ -1.7
VPS13A-211ENST00000484581 VIMP08670 466 aaKnown RBP4.42□□□□□ -1.7
VPS13A-211ENST00000484581 RAB40ALP0C0E4 278 aa4.42□□□□□ -1.7
VPS13A-211ENST00000484581 UGT1A1P22309 533 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms