RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 LILRA5A6NI73 299 aa12.66□□□□□ -0.38
HDAC1-209ENST00000484305 A8MU76 341 aa12.66□□□□□ -0.38
HDAC1-209ENST00000484305 NVLO15381 856 aaKnown RBP12.66□□□□□ -0.38
HDAC1-209ENST00000484305 SGTAO43765 313 aa12.66□□□□□ -0.38
HDAC1-209ENST00000484305 KCNJ13O60928 360 aa12.66□□□□□ -0.38
HDAC1-209ENST00000484305 VIPP01282 170 aa12.66□□□□□ -0.38
HDAC1-209ENST00000484305 FGGP02679 453 aa12.66□□□□□ -0.38
HDAC1-209ENST00000484305 PRSS56P0CW18 603 aa12.66□□□□□ -0.38
HDAC1-209ENST00000484305 FGF3P11487 239 aaPredicted RBP12.66□□□□□ -0.38
HDAC1-209ENST00000484305 PBLDP30039 288 aaPredicted RBP12.66□□□□□ -0.38
HDAC1-209ENST00000484305 MC4RP32245 332 aa12.66□□□□□ -0.38
HDAC1-209ENST00000484305 CXCR5P32302 372 aa12.66□□□□□ -0.38
HDAC1-209ENST00000484305 CLN3Q13286 438 aa12.66□□□□□ -0.38
HDAC1-209ENST00000484305 NFE2L1Q14494 772 aa12.66□□□□□ -0.38
HDAC1-209ENST00000484305 CCNG2Q16589 344 aa12.66□□□□□ -0.38
HDAC1-209ENST00000484305 LONRF2Q1L5Z9 754 aa12.66□□□□□ -0.38
HDAC1-209ENST00000484305 SNAP47Q5SQN1 464 aa12.66□□□□□ -0.38
HDAC1-209ENST00000484305 SNX20Q7Z614 316 aa12.66□□□□□ -0.38
HDAC1-209ENST00000484305 LINC00523Q86TU6 105 aa12.66□□□□□ -0.38
HDAC1-209ENST00000484305 NXPE1Q8N323 547 aa12.66□□□□□ -0.38
HDAC1-209ENST00000484305 ZNF514Q96K75 400 aaPredicted RBP12.66□□□□□ -0.38
HDAC1-209ENST00000484305 FCRL3Q96P31 734 aaPredicted RBP12.66□□□□□ -0.38
HDAC1-209ENST00000484305 UCK1Q9HA47 277 aa12.66□□□□□ -0.38
HDAC1-209ENST00000484305 CPNE5Q9HCH3 593 aa12.66□□□□□ -0.38
HDAC1-209ENST00000484305 SLC40A1Q9NP59 571 aa12.66□□□□□ -0.38
HDAC1-209ENST00000484305 NLE1Q9NVX2 485 aaPredicted RBP12.66□□□□□ -0.38
HDAC1-209ENST00000484305 OGFRQ9NZT2 677 aa12.66□□□□□ -0.38
HDAC1-209ENST00000484305 FOXJ2Q9P0K8 574 aa12.66□□□□□ -0.38
HDAC1-209ENST00000484305 AKAP7Q9P0M2 348 aaPredicted RBP12.66□□□□□ -0.38
HDAC1-209ENST00000484305 IGSF10Q6WRI0 2623 aa12.66□□□□□ -0.38
HDAC1-209ENST00000484305 TRBV5-4A0A0C4DH59 114 aa12.65□□□□□ -0.38
HDAC1-209ENST00000484305 CCDC78A2IDD5 438 aa12.65□□□□□ -0.38
HDAC1-209ENST00000484305 MROH6A6NGR9 719 aa12.65□□□□□ -0.38
HDAC1-209ENST00000484305 ERI2A8K979 691 aaKnown RBP12.65□□□□□ -0.38
HDAC1-209ENST00000484305 C9orf172C9J069 976 aa12.65□□□□□ -0.38
HDAC1-209ENST00000484305 H7C0S8 307 aa12.65□□□□□ -0.38
HDAC1-209ENST00000484305 NRDCO43847 1150 aa12.65□□□□□ -0.38
HDAC1-209ENST00000484305 CEP104O60308 925 aa12.65□□□□□ -0.38
HDAC1-209ENST00000484305 SUN1O94901 812 aa12.65□□□□□ -0.38
HDAC1-209ENST00000484305 ZSCAN5DPP0CG00 497 aa12.65□□□□□ -0.38
HDAC1-209ENST00000484305 ITGALP20701 1170 aa12.65□□□□□ -0.38
HDAC1-209ENST00000484305 CSTF2P33240 577 aaKnown RBP eCLIP12.65□□□□□ -0.38
HDAC1-209ENST00000484305 FDFT1P37268 417 aa12.65□□□□□ -0.38
HDAC1-209ENST00000484305 GRIA1P42261 906 aa12.65□□□□□ -0.38
HDAC1-209ENST00000484305 CXADRP78310 365 aa12.65□□□□□ -0.38
HDAC1-209ENST00000484305 GPR18Q14330 331 aa12.65□□□□□ -0.38
HDAC1-209ENST00000484305 TGIF1Q15583 401 aa12.65□□□□□ -0.38
HDAC1-209ENST00000484305 CCDC38Q502W7 563 aa12.65□□□□□ -0.38
HDAC1-209ENST00000484305 ZRANB3Q5FWF4 1079 aa12.65□□□□□ -0.38
HDAC1-209ENST00000484305 BROXQ5VW32 411 aa12.65□□□□□ -0.38
HDAC1-209ENST00000484305 METRNLQ641Q3 311 aa12.65□□□□□ -0.38
HDAC1-209ENST00000484305 XKR5Q6UX68 686 aa12.65□□□□□ -0.38
HDAC1-209ENST00000484305 ARHGAP22Q7Z5H3 698 aa12.65□□□□□ -0.38
HDAC1-209ENST00000484305 ZFAND4Q86XD8 727 aa12.65□□□□□ -0.38
HDAC1-209ENST00000484305 CCDC89Q8N998 374 aa12.65□□□□□ -0.38
HDAC1-209ENST00000484305 AGBL5Q8NDL9 886 aa12.65□□□□□ -0.38
HDAC1-209ENST00000484305 STYXQ8WUJ0 223 aa12.65□□□□□ -0.38
HDAC1-209ENST00000484305 PMEPA1Q969W9 287 aa12.65□□□□□ -0.38
HDAC1-209ENST00000484305 ULK4Q96C45 1275 aa12.65□□□□□ -0.38
HDAC1-209ENST00000484305 CXorf40BQ96DE9 158 aa12.65□□□□□ -0.38
HDAC1-209ENST00000484305 DCUN1D1Q96GG9 259 aa12.65□□□□□ -0.38
HDAC1-209ENST00000484305 CDKN2AIPNLQ96HQ2 116 aa12.65□□□□□ -0.38
HDAC1-209ENST00000484305 RAB6BQ9NRW1 208 aa12.65□□□□□ -0.38
HDAC1-209ENST00000484305 POT1Q9NUX5 634 aa12.65□□□□□ -0.38
HDAC1-209ENST00000484305 OCIAD1Q9NX40 245 aa12.65□□□□□ -0.38
HDAC1-209ENST00000484305 FAM8A1Q9UBU6 413 aa12.65□□□□□ -0.38
HDAC1-209ENST00000484305 KLHL3Q9UH77 587 aa12.65□□□□□ -0.38
HDAC1-209ENST00000484305 ACSL6Q9UKU0 697 aa12.65□□□□□ -0.38
HDAC1-209ENST00000484305 DRG1Q9Y295 367 aaKnown RBP12.65□□□□□ -0.38
HDAC1-209ENST00000484305 CACNA1GO43497 2377 aa12.65□□□□□ -0.38
HDAC1-209ENST00000484305 MGAT4DA6NG13 374 aa12.64□□□□□ -0.39
HDAC1-209ENST00000484305 E7EVH7 732 aa12.64□□□□□ -0.39
HDAC1-209ENST00000484305 UBXN7O94888 489 aa12.64□□□□□ -0.39
HDAC1-209ENST00000484305 ATP1B2P14415 290 aaPredicted RBP12.64□□□□□ -0.39
HDAC1-209ENST00000484305 TYRP1P17643 537 aa12.64□□□□□ -0.39
HDAC1-209ENST00000484305 PSMA3P25788 255 aa12.64□□□□□ -0.39
HDAC1-209ENST00000484305 RPL22P35268 128 aaKnown RBP12.64□□□□□ -0.39
HDAC1-209ENST00000484305 HALP42357 657 aa12.64□□□□□ -0.39
HDAC1-209ENST00000484305 LMAN1P49257 510 aa12.64□□□□□ -0.39
HDAC1-209ENST00000484305 ARSDP51689 593 aa12.64□□□□□ -0.39
HDAC1-209ENST00000484305 GFERP55789 205 aa12.64□□□□□ -0.39
HDAC1-209ENST00000484305 CDH17Q12864 832 aa12.64□□□□□ -0.39
HDAC1-209ENST00000484305 SEMA5AQ13591 1074 aa12.64□□□□□ -0.39
HDAC1-209ENST00000484305 RPE65Q16518 533 aa12.64□□□□□ -0.39
HDAC1-209ENST00000484305 KCTD19Q17RG1 926 aaPredicted RBP12.64□□□□□ -0.39
HDAC1-209ENST00000484305 GPR33Q49SQ1 333 aa12.64□□□□□ -0.39
HDAC1-209ENST00000484305 BCL7AQ4VC05 210 aa12.64□□□□□ -0.39
HDAC1-209ENST00000484305 DRICH1Q6PGQ1 229 aaPredicted RBP12.64□□□□□ -0.39
HDAC1-209ENST00000484305 PPP1R21Q6ZMI0 780 aa12.64□□□□□ -0.39
HDAC1-209ENST00000484305 SERPINA9Q86WD7 417 aa12.64□□□□□ -0.39
HDAC1-209ENST00000484305 FAM129CQ86XR2 697 aa12.64□□□□□ -0.39
HDAC1-209ENST00000484305 PIANPQ8IYJ0 282 aa12.64□□□□□ -0.39
HDAC1-209ENST00000484305 LILRA3Q8N6C8 439 aaPredicted RBP12.64□□□□□ -0.39
HDAC1-209ENST00000484305 DNAAF3Q8N9W5 541 aa12.64□□□□□ -0.39
HDAC1-209ENST00000484305 GPR150Q8NGU9 434 aa12.64□□□□□ -0.39
HDAC1-209ENST00000484305 OR2L2Q8NH16 312 aa12.64□□□□□ -0.39
HDAC1-209ENST00000484305 ART4Q93070 314 aa12.64□□□□□ -0.39
HDAC1-209ENST00000484305 LINC00615Q96LM1 132 aaPredicted RBP12.64□□□□□ -0.39
HDAC1-209ENST00000484305 TAAR9Q96RI9 348 aa12.64□□□□□ -0.39
HDAC1-209ENST00000484305 COPS8Q99627 209 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms