RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 MYL5Q02045 173 aa12.6□□□□□ -0.39
UBR4-213ENST00000483922 KRT81Q14533 505 aa12.6□□□□□ -0.39
UBR4-213ENST00000483922 CHRNA6Q15825 494 aa12.6□□□□□ -0.39
UBR4-213ENST00000483922 ATP13A5Q4VNC0 1218 aa12.6□□□□□ -0.39
UBR4-213ENST00000483922 ZNF789Q5FWF6 425 aa12.6□□□□□ -0.39
UBR4-213ENST00000483922 CCDC122Q5T0U0 273 aa12.6□□□□□ -0.39
UBR4-213ENST00000483922 HGSNATQ68CP4 663 aa12.6□□□□□ -0.39
UBR4-213ENST00000483922 ENDOVQ8N8Q3 282 aaKnown RBP12.6□□□□□ -0.39
UBR4-213ENST00000483922 INPP5DQ92835 1189 aa12.6□□□□□ -0.39
UBR4-213ENST00000483922 MR1Q95460 341 aa12.6□□□□□ -0.39
UBR4-213ENST00000483922 CXorf40BQ96DE9 158 aa12.6□□□□□ -0.39
UBR4-213ENST00000483922 NRTNQ99748 197 aa12.6□□□□□ -0.39
UBR4-213ENST00000483922 ZSCAN5AQ9BUG6 496 aa12.6□□□□□ -0.39
UBR4-213ENST00000483922 CEP41Q9BYV8 373 aa12.6□□□□□ -0.39
UBR4-213ENST00000483922 MAGEE1Q9HCI5 957 aa12.6□□□□□ -0.39
UBR4-213ENST00000483922 MRPL47Q9HD33 250 aaKnown RBP12.6□□□□□ -0.39
UBR4-213ENST00000483922 BPIFA1Q9NP55 256 aa12.6□□□□□ -0.39
UBR4-213ENST00000483922 RTN4Q9NQC3 1192 aaKnown RBP12.6□□□□□ -0.39
UBR4-213ENST00000483922 KCND1Q9NSA2 647 aa12.6□□□□□ -0.39
UBR4-213ENST00000483922 LMBRD1Q9NUN5 540 aa12.6□□□□□ -0.39
UBR4-213ENST00000483922 PSMD13Q9UNM6 376 aa12.6□□□□□ -0.39
UBR4-213ENST00000483922 NTNG1Q9Y2I2 539 aa12.6□□□□□ -0.39
UBR4-213ENST00000483922 ZNF451Q9Y4E5 1061 aa12.6□□□□□ -0.39
UBR4-213ENST00000483922 GPR39O43194 453 aa12.59□□□□□ -0.39
UBR4-213ENST00000483922 VEGFDO43915 354 aa12.59□□□□□ -0.39
UBR4-213ENST00000483922 MTA2O94776 668 aa12.59□□□□□ -0.39
UBR4-213ENST00000483922 TMEM63AO94886 807 aa12.59□□□□□ -0.39
UBR4-213ENST00000483922 CDK11BP21127 795 aaKnown RBP12.59□□□□□ -0.39
UBR4-213ENST00000483922 RORAP35398 523 aa12.59□□□□□ -0.39
UBR4-213ENST00000483922 ABRQ12979 859 aa12.59□□□□□ -0.39
UBR4-213ENST00000483922 RAPSNQ13702 412 aa12.59□□□□□ -0.39
UBR4-213ENST00000483922 NOMO1Q15155 1222 aa12.59□□□□□ -0.39
UBR4-213ENST00000483922 CCDC183Q5T5S1 534 aa12.59□□□□□ -0.39
UBR4-213ENST00000483922 TIGD7Q6NT04 549 aaPredicted RBP12.59□□□□□ -0.39
UBR4-213ENST00000483922 B4GALNT4Q76KP1 1039 aa12.59□□□□□ -0.39
UBR4-213ENST00000483922 BPHLQ86WA6 291 aaPredicted RBP12.59□□□□□ -0.39
UBR4-213ENST00000483922 RBM12BQ8IXT5 1001 aaKnown RBP12.59□□□□□ -0.39
UBR4-213ENST00000483922 SRRM1Q8IYB3 904 aaKnown RBP12.59□□□□□ -0.39
UBR4-213ENST00000483922 DSELQ8IZU8 1212 aa12.59□□□□□ -0.39
UBR4-213ENST00000483922 CISD2Q8N5K1 135 aaKnown RBP12.59□□□□□ -0.39
UBR4-213ENST00000483922 RASGEF1AQ8N9B8 481 aa12.59□□□□□ -0.39
UBR4-213ENST00000483922 GLIS1Q8NBF1 620 aa12.59□□□□□ -0.39
UBR4-213ENST00000483922 NAT14Q8WUY8 206 aa12.59□□□□□ -0.39
UBR4-213ENST00000483922 SEC14L1Q92503 715 aa12.59□□□□□ -0.39
UBR4-213ENST00000483922 PNPLA2Q96AD5 504 aa12.59□□□□□ -0.39
UBR4-213ENST00000483922 FAF2Q96CS3 445 aa12.59□□□□□ -0.39
UBR4-213ENST00000483922 INSM2Q96T92 566 aaPredicted RBP12.59□□□□□ -0.39
UBR4-213ENST00000483922 SMAD5Q99717 465 aaKnown RBP12.59□□□□□ -0.39
UBR4-213ENST00000483922 SLAMF7Q9NQ25 335 aa12.59□□□□□ -0.39
UBR4-213ENST00000483922 TCFL5Q9UL49 500 aa12.59□□□□□ -0.39
UBR4-213ENST00000483922 ZNF711Q9Y462 761 aa12.59□□□□□ -0.39
UBR4-213ENST00000483922 PCDHGB7Q9Y5F8 929 aa12.59□□□□□ -0.39
UBR4-213ENST00000483922 CFAP20Q9Y6A4 193 aaKnown RBP12.59□□□□□ -0.39
UBR4-213ENST00000483922 SSU72P8A0A1W2PR75 194 aa12.58□□□□□ -0.4
UBR4-213ENST00000483922 OR5K3A6NET4 321 aa12.58□□□□□ -0.4
UBR4-213ENST00000483922 MASP2O00187 686 aa12.58□□□□□ -0.4
UBR4-213ENST00000483922 MEN1O00255 615 aa12.58□□□□□ -0.4
UBR4-213ENST00000483922 UGT1A9O60656 530 aa12.58□□□□□ -0.4
UBR4-213ENST00000483922 DPM1O60762 260 aa12.58□□□□□ -0.4
UBR4-213ENST00000483922 POP7O75817 140 aaKnown RBP12.58□□□□□ -0.4
UBR4-213ENST00000483922 SLC4A1P02730 911 aa12.58□□□□□ -0.4
UBR4-213ENST00000483922 MYBL1P10243 752 aa12.58□□□□□ -0.4
UBR4-213ENST00000483922 UGT1A6P19224 532 aa12.58□□□□□ -0.4
UBR4-213ENST00000483922 UGT1A1P22309 533 aa12.58□□□□□ -0.4
UBR4-213ENST00000483922 UGT1A4P22310 534 aa12.58□□□□□ -0.4
UBR4-213ENST00000483922 TNFRSF8P28908 595 aa12.58□□□□□ -0.4
UBR4-213ENST00000483922 ARCN1P48444 511 aaKnown RBP12.58□□□□□ -0.4
UBR4-213ENST00000483922 TUBB4BP68371 445 aa12.58□□□□□ -0.4
UBR4-213ENST00000483922 HSD11B2P80365 405 aa12.58□□□□□ -0.4
UBR4-213ENST00000483922 ACY1Q03154 408 aa12.58□□□□□ -0.4
UBR4-213ENST00000483922 DMPKQ09013 629 aa12.58□□□□□ -0.4
UBR4-213ENST00000483922 KLHL30Q0D2K2 578 aa12.58□□□□□ -0.4
UBR4-213ENST00000483922 TUBB2AQ13885 445 aa12.58□□□□□ -0.4
UBR4-213ENST00000483922 PDPK2PQ6A1A2 396 aa12.58□□□□□ -0.4
UBR4-213ENST00000483922 DUS1LQ6P1R4 473 aaKnown RBP12.58□□□□□ -0.4
UBR4-213ENST00000483922 SPATA22Q8NHS9 363 aa12.58□□□□□ -0.4
UBR4-213ENST00000483922 HDAC11Q96DB2 347 aa12.58□□□□□ -0.4
UBR4-213ENST00000483922 IMP4Q96G21 291 aaKnown RBP12.58□□□□□ -0.4
UBR4-213ENST00000483922 NAP1L5Q96NT1 182 aaPredicted RBP12.58□□□□□ -0.4
UBR4-213ENST00000483922 VPS35Q96QK1 796 aa12.58□□□□□ -0.4
UBR4-213ENST00000483922 BARD1Q99728 777 aaKnown RBP12.58□□□□□ -0.4
UBR4-213ENST00000483922 TUBB2BQ9BVA1 445 aa12.58□□□□□ -0.4
UBR4-213ENST00000483922 UGT1A7Q9HAW7 530 aa12.58□□□□□ -0.4
UBR4-213ENST00000483922 UGT1A10Q9HAW8 530 aa12.58□□□□□ -0.4
UBR4-213ENST00000483922 UGT1A8Q9HAW9 530 aa12.58□□□□□ -0.4
UBR4-213ENST00000483922 ZBTB20Q9HC78 741 aaPredicted RBP12.58□□□□□ -0.4
UBR4-213ENST00000483922 IL26Q9NPH9 171 aa12.58□□□□□ -0.4
UBR4-213ENST00000483922 PCMTD2Q9NV79 361 aa12.58□□□□□ -0.4
UBR4-213ENST00000483922 HRASLS2Q9NWW9 162 aa12.58□□□□□ -0.4
UBR4-213ENST00000483922 ANAPC7Q9UJX3 599 aa12.58□□□□□ -0.4
UBR4-213ENST00000483922 CPNE3O75131 537 aaKnown RBP12.57□□□□□ -0.4
UBR4-213ENST00000483922 MT-CYBP00156 380 aaPredicted RBP12.57□□□□□ -0.4
UBR4-213ENST00000483922 CYP1A2P05177 515 aa12.57□□□□□ -0.4
UBR4-213ENST00000483922 RAB40ALP0C0E4 278 aa12.57□□□□□ -0.4
UBR4-213ENST00000483922 CA4P22748 312 aa12.57□□□□□ -0.4
UBR4-213ENST00000483922 KPNA2P52292 529 aaKnown RBP12.57□□□□□ -0.4
UBR4-213ENST00000483922 IFI35P80217 286 aaPredicted RBP12.57□□□□□ -0.4
UBR4-213ENST00000483922 NFE2L1Q14494 772 aa12.57□□□□□ -0.4
UBR4-213ENST00000483922 FAM198BQ6UWH4 519 aa12.57□□□□□ -0.4
UBR4-213ENST00000483922 SPOCD1Q6ZMY3 1216 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms