RNA–Protein interactions for RNA: ENST00000483873.6

GTF3C4-202, Transcript of general transcription factor IIIC subunit 4, humanhuman

TSL 3 BASIC

Gene GTF3C4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-202ENST00000483873 KRT12Q99456 494 aa26.03■■□□□ 1.76
GTF3C4-202ENST00000483873 MRM3Q9HC36 420 aaKnown RBP26.03■■□□□ 1.76
GTF3C4-202ENST00000483873 XAB2Q9HCS7 855 aaKnown RBP26.03■■□□□ 1.76
GTF3C4-202ENST00000483873 ATXN7L1Q9ULK2 861 aaPredicted RBP26.03■■□□□ 1.76
GTF3C4-202ENST00000483873 WDR37Q9Y2I8 494 aa26.03■■□□□ 1.76
GTF3C4-202ENST00000483873 PCDHB1Q9Y5F3 818 aa26.03■■□□□ 1.76
GTF3C4-202ENST00000483873 KIF26BQ2KJY2 2108 aa26.03■■□□□ 1.76
GTF3C4-202ENST00000483873 CSO75390 466 aaKnown RBP26.02■■□□□ 1.76
GTF3C4-202ENST00000483873 IDSP22304 550 aa26.02■■□□□ 1.76
GTF3C4-202ENST00000483873 ALDH4A1P30038 563 aa26.02■■□□□ 1.76
GTF3C4-202ENST00000483873 PDX1P52945 283 aa26.02■■□□□ 1.76
GTF3C4-202ENST00000483873 HHEXQ03014 270 aa26.02■■□□□ 1.76
GTF3C4-202ENST00000483873 CKAP4Q07065 602 aaKnown RBP26.02■■□□□ 1.76
GTF3C4-202ENST00000483873 TUBB2AQ13885 445 aa26.02■■□□□ 1.76
GTF3C4-202ENST00000483873 CHCHD2P9Q5T1J5 151 aaPredicted RBP26.02■■□□□ 1.76
GTF3C4-202ENST00000483873 IZUMO3Q5VZ72 239 aa26.02■■□□□ 1.76
GTF3C4-202ENST00000483873 CACTIN-AS1Q8N1I8 211 aa26.02■■□□□ 1.76
GTF3C4-202ENST00000483873 AGGF1Q8N302 714 aaeCLIP26.02■■□□□ 1.76
GTF3C4-202ENST00000483873 DEPDC7Q96QD5 511 aa26.02■■□□□ 1.76
GTF3C4-202ENST00000483873 TUBB2BQ9BVA1 445 aa26.02■■□□□ 1.76
GTF3C4-202ENST00000483873 MARCH4Q9P2E8 410 aaPredicted RBP26.02■■□□□ 1.76
GTF3C4-202ENST00000483873 PRSS21Q9Y6M0 314 aa26.02■■□□□ 1.76
GTF3C4-202ENST00000483873 KIR2DS5A0A0G2JLQ3 304 aa26.01■■□□□ 1.75
GTF3C4-202ENST00000483873 A0A0G2JNG1 304 aa26.01■■□□□ 1.75
GTF3C4-202ENST00000483873 KIR2DS3K7RE56 304 aa26.01■■□□□ 1.75
GTF3C4-202ENST00000483873 SLC2A4P14672 509 aa26.01■■□□□ 1.75
GTF3C4-202ENST00000483873 ARNTP27540 789 aa26.01■■□□□ 1.75
GTF3C4-202ENST00000483873 MAGEA3P43357 314 aa26.01■■□□□ 1.75
GTF3C4-202ENST00000483873 MRPS25P82663 173 aaKnown RBP26.01■■□□□ 1.75
GTF3C4-202ENST00000483873 KIR2DS5Q14953 304 aa26.01■■□□□ 1.75
GTF3C4-202ENST00000483873 CASC4Q6P4E1 433 aa26.01■■□□□ 1.75
GTF3C4-202ENST00000483873 ABRAXAS1Q6UWZ7 409 aa26.01■■□□□ 1.75
GTF3C4-202ENST00000483873 RBM44Q6ZP01 1051 aaKnown RBP26.01■■□□□ 1.75
GTF3C4-202ENST00000483873 LDB1Q86U70 411 aaPredicted RBP26.01■■□□□ 1.75
GTF3C4-202ENST00000483873 LILRA3Q8N6C8 439 aaPredicted RBP26.01■■□□□ 1.75
GTF3C4-202ENST00000483873 WDR48Q8TAF3 677 aa26.01■■□□□ 1.75
GTF3C4-202ENST00000483873 TBRG4Q969Z0 631 aaKnown RBP eCLIP26.01■■□□□ 1.75
GTF3C4-202ENST00000483873 LINC00615Q96LM1 132 aaPredicted RBP26.01■■□□□ 1.75
GTF3C4-202ENST00000483873 GFM1Q96RP9 751 aaKnown RBP26.01■■□□□ 1.75
GTF3C4-202ENST00000483873 ZNF624Q9P2J8 865 aaPredicted RBP26.01■■□□□ 1.75
GTF3C4-202ENST00000483873 CPNE7Q9UBL6 633 aa26.01■■□□□ 1.75
GTF3C4-202ENST00000483873 PSMD13Q9UNM6 376 aa26.01■■□□□ 1.75
GTF3C4-202ENST00000483873 MGAT4DA6NG13 374 aa26■■□□□ 1.75
GTF3C4-202ENST00000483873 OR5K4A6NMS3 321 aa26■■□□□ 1.75
GTF3C4-202ENST00000483873 OR52A4PA6NMU1 304 aa26■■□□□ 1.75
GTF3C4-202ENST00000483873 D6RAR5 112 aa26■■□□□ 1.75
GTF3C4-202ENST00000483873 KCNJ13O60928 360 aa26■■□□□ 1.75
GTF3C4-202ENST00000483873 TCEA3O75764 348 aa26■■□□□ 1.75
GTF3C4-202ENST00000483873 UBE2IP63279 158 aaKnown RBP26■■□□□ 1.75
GTF3C4-202ENST00000483873 ITIH4Q14624 930 aa26■■□□□ 1.75
GTF3C4-202ENST00000483873 CLCA4Q14CN2 919 aa26■■□□□ 1.75
GTF3C4-202ENST00000483873 AMZ1Q400G9 498 aa26■■□□□ 1.75
GTF3C4-202ENST00000483873 FASTKD1Q53R41 847 aaKnown RBP26■■□□□ 1.75
GTF3C4-202ENST00000483873 UNQ6494/PRO21346Q6UXR6 183 aa26■■□□□ 1.75
GTF3C4-202ENST00000483873 SYDE1Q6ZW31 735 aaPredicted RBP26■■□□□ 1.75
GTF3C4-202ENST00000483873 OR2L2Q8NH16 312 aa26■■□□□ 1.75
GTF3C4-202ENST00000483873 SGSM3Q96HU1 749 aa26■■□□□ 1.75
GTF3C4-202ENST00000483873 SARS2Q9NP81 518 aaKnown RBP26■■□□□ 1.75
GTF3C4-202ENST00000483873 CATSPERZQ9NTU4 200 aa26■■□□□ 1.75
GTF3C4-202ENST00000483873 MAP1BP46821 2468 aaKnown RBP26■■□□□ 1.75
GTF3C4-202ENST00000483873 PRAMEF33A0A0G2JMD5 474 aa25.99■■□□□ 1.75
GTF3C4-202ENST00000483873 OR1I1O60431 355 aa25.99■■□□□ 1.75
GTF3C4-202ENST00000483873 SLC19A1P41440 591 aa25.99■■□□□ 1.75
GTF3C4-202ENST00000483873 ISXQ2M1V0 245 aa25.99■■□□□ 1.75
GTF3C4-202ENST00000483873 AGAP9Q5VTM2 703 aa25.99■■□□□ 1.75
GTF3C4-202ENST00000483873 WASH2PQ6VEQ5 465 aa25.99■■□□□ 1.75
GTF3C4-202ENST00000483873 PACS1Q6VY07 963 aa25.99■■□□□ 1.75
GTF3C4-202ENST00000483873 TMPRSS9Q7Z410 1059 aa25.99■■□□□ 1.75
GTF3C4-202ENST00000483873 B3GNT8Q7Z7M8 397 aa25.99■■□□□ 1.75
GTF3C4-202ENST00000483873 SLC9B2Q86UD5 537 aa25.99■■□□□ 1.75
GTF3C4-202ENST00000483873 WASH6PQ9NQA3 447 aa25.99■■□□□ 1.75
GTF3C4-202ENST00000483873 TRABD2BA6NFA1 517 aa25.98■■□□□ 1.75
GTF3C4-202ENST00000483873 SDR42E2A6NKP2 422 aa25.98■■□□□ 1.75
GTF3C4-202ENST00000483873 NSG1P42857 185 aa25.98■■□□□ 1.75
GTF3C4-202ENST00000483873 GPR3P46089 330 aa25.98■■□□□ 1.75
GTF3C4-202ENST00000483873 DHX34Q14147 1143 aaKnown RBP25.98■■□□□ 1.75
GTF3C4-202ENST00000483873 DNTTIP2Q5QJE6 756 aaKnown RBP25.98■■□□□ 1.75
GTF3C4-202ENST00000483873 NKAIN2Q5VXU1 208 aa25.98■■□□□ 1.75
GTF3C4-202ENST00000483873 METRNLQ641Q3 311 aa25.98■■□□□ 1.75
GTF3C4-202ENST00000483873 SIGLEC10Q96LC7 697 aa25.98■■□□□ 1.75
GTF3C4-202ENST00000483873 SLC38A3Q99624 504 aa25.98■■□□□ 1.75
GTF3C4-202ENST00000483873 TRIM31Q9BZY9 425 aa25.98■■□□□ 1.75
GTF3C4-202ENST00000483873 RDH14Q9HBH5 336 aa25.98■■□□□ 1.75
GTF3C4-202ENST00000483873 SAMD15Q9P1V8 674 aa25.98■■□□□ 1.75
GTF3C4-202ENST00000483873 ENTPD2Q9Y5L3 495 aa25.98■■□□□ 1.75
GTF3C4-202ENST00000483873 FREM2Q5SZK8 3169 aa25.98■■□□□ 1.75
GTF3C4-202ENST00000483873 CACNA1BQ00975 2339 aa25.98■■□□□ 1.75
GTF3C4-202ENST00000483873 IGHV1OR21-1A0A087WYE8 117 aa25.97■■□□□ 1.75
GTF3C4-202ENST00000483873 GOLGA8KD6RF30 607 aa25.97■■□□□ 1.75
GTF3C4-202ENST00000483873 GOLGA8TH3BQL2 631 aa25.97■■□□□ 1.75
GTF3C4-202ENST00000483873 CD3EAPO15446 510 aaKnown RBP25.97■■□□□ 1.75
GTF3C4-202ENST00000483873 VAPBO95292 243 aa25.97■■□□□ 1.75
GTF3C4-202ENST00000483873 XRCC1P18887 633 aaPredicted RBP25.97■■□□□ 1.75
GTF3C4-202ENST00000483873 LYPLAL1Q5VWZ2 237 aa25.97■■□□□ 1.75
GTF3C4-202ENST00000483873 PCGF5Q86SE9 256 aa25.97■■□□□ 1.75
GTF3C4-202ENST00000483873 HM13Q8TCT9 377 aa25.97■■□□□ 1.75
GTF3C4-202ENST00000483873 ZNF669Q96BR6 464 aaPredicted RBP25.97■■□□□ 1.75
GTF3C4-202ENST00000483873 ATXN7L3BQ96GX2 97 aa25.97■■□□□ 1.75
GTF3C4-202ENST00000483873 FCRL3Q96P31 734 aaPredicted RBP25.97■■□□□ 1.75
GTF3C4-202ENST00000483873 FOXP3Q9BZS1 431 aa25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms