RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 PDE4DIPQ5VU43 2346 aa13.04□□□□□ -0.32
CPNE1-225ENST00000483495 C16orf96A6NNT2 1141 aa13.04□□□□□ -0.32
CPNE1-225ENST00000483495 VPS4BO75351 444 aa13.04□□□□□ -0.32
CPNE1-225ENST00000483495 OR56A5P0C7T3 313 aa13.04□□□□□ -0.32
CPNE1-225ENST00000483495 UROSP10746 265 aa13.04□□□□□ -0.32
CPNE1-225ENST00000483495 ENO3P13929 434 aaPredicted RBP13.04□□□□□ -0.32
CPNE1-225ENST00000483495 GNAZP19086 355 aa13.04□□□□□ -0.32
CPNE1-225ENST00000483495 SLC6A11P48066 632 aa13.04□□□□□ -0.32
CPNE1-225ENST00000483495 ACADVLP49748 655 aa13.04□□□□□ -0.32
CPNE1-225ENST00000483495 CCNG1P51959 295 aa13.04□□□□□ -0.32
CPNE1-225ENST00000483495 PKNOX1P55347 436 aa13.04□□□□□ -0.32
CPNE1-225ENST00000483495 IRX1P78414 480 aaPredicted RBP13.04□□□□□ -0.32
CPNE1-225ENST00000483495 MESP2Q0VG99 397 aa13.04□□□□□ -0.32
CPNE1-225ENST00000483495 ZRSR2Q15696 482 aaKnown RBP13.04□□□□□ -0.32
CPNE1-225ENST00000483495 FBXO48Q5FWF7 155 aa13.04□□□□□ -0.32
CPNE1-225ENST00000483495 RARS2Q5T160 578 aaKnown RBP13.04□□□□□ -0.32
CPNE1-225ENST00000483495 WLSQ5T9L3 541 aa13.04□□□□□ -0.32
CPNE1-225ENST00000483495 C6orf163Q5TEZ5 329 aa13.04□□□□□ -0.32
CPNE1-225ENST00000483495 FAM219BQ5XKK7 198 aa13.04□□□□□ -0.32
CPNE1-225ENST00000483495 METTL2BQ6P1Q9 378 aaKnown RBP13.04□□□□□ -0.32
CPNE1-225ENST00000483495 C16orf89Q6UX73 402 aa13.04□□□□□ -0.32
CPNE1-225ENST00000483495 TMEM184AQ6ZMB5 413 aa13.04□□□□□ -0.32
CPNE1-225ENST00000483495 RIPOR1Q6ZS17 1223 aa13.04□□□□□ -0.32
CPNE1-225ENST00000483495 RAVER1Q8IY67 606 aaKnown RBP13.04□□□□□ -0.32
CPNE1-225ENST00000483495 TRAM1L1Q8N609 369 aa13.04□□□□□ -0.32
CPNE1-225ENST00000483495 GDPD5Q8WTR4 605 aa13.04□□□□□ -0.32
CPNE1-225ENST00000483495 ZFYVE19Q96K21 471 aa13.04□□□□□ -0.32
CPNE1-225ENST00000483495 KCNA7Q96RP8 456 aa13.04□□□□□ -0.32
CPNE1-225ENST00000483495 UTP6Q9NYH9 597 aaKnown RBP13.04□□□□□ -0.32
CPNE1-225ENST00000483495 NOP53Q9NZM5 478 aaKnown RBP13.04□□□□□ -0.32
CPNE1-225ENST00000483495 DEC1Q9P2X7 70 aa13.04□□□□□ -0.32
CPNE1-225ENST00000483495 EIF2B4Q9UI10 523 aaKnown RBP13.04□□□□□ -0.32
CPNE1-225ENST00000483495 ADAMTS6Q9UKP5 1117 aa13.04□□□□□ -0.32
CPNE1-225ENST00000483495 PRPF19Q9UMS4 504 aaKnown RBP13.04□□□□□ -0.32
CPNE1-225ENST00000483495 ST14Q9Y5Y6 855 aa13.04□□□□□ -0.32
CPNE1-225ENST00000483495 EPOPA6NHQ4 379 aa13.04□□□□□ -0.32
CPNE1-225ENST00000483495 PSMG1O95456 288 aa13.04□□□□□ -0.32
CPNE1-225ENST00000483495 S100BP04271 92 aaPredicted RBP13.04□□□□□ -0.32
CPNE1-225ENST00000483495 ATP1B2P14415 290 aaPredicted RBP13.04□□□□□ -0.32
CPNE1-225ENST00000483495 AOAHP28039 575 aa13.04□□□□□ -0.32
CPNE1-225ENST00000483495 PRDX3P30048 256 aaKnown RBP13.04□□□□□ -0.32
CPNE1-225ENST00000483495 MMP12P39900 470 aa13.04□□□□□ -0.32
CPNE1-225ENST00000483495 NUDT2P50583 147 aa13.04□□□□□ -0.32
CPNE1-225ENST00000483495 MTTPP55157 894 aa13.04□□□□□ -0.32
CPNE1-225ENST00000483495 TBL3Q12788 808 aaKnown RBP13.04□□□□□ -0.32
CPNE1-225ENST00000483495 MAPRE2Q15555 327 aa13.04□□□□□ -0.32
CPNE1-225ENST00000483495 HENMT1Q5T8I9 393 aaKnown RBP13.04□□□□□ -0.32
CPNE1-225ENST00000483495 GPRIN3Q6ZVF9 776 aa13.04□□□□□ -0.32
CPNE1-225ENST00000483495 TECPR1Q7Z6L1 1165 aa13.04□□□□□ -0.32
CPNE1-225ENST00000483495 DSELQ8IZU8 1212 aa13.04□□□□□ -0.32
CPNE1-225ENST00000483495 CHCHD4Q8N4Q1 142 aa13.04□□□□□ -0.32
CPNE1-225ENST00000483495 UBTD2Q8WUN7 234 aa13.04□□□□□ -0.32
CPNE1-225ENST00000483495 CCT7Q99832 543 aa13.04□□□□□ -0.32
CPNE1-225ENST00000483495 SPATA16Q9BXB7 569 aa13.04□□□□□ -0.32
CPNE1-225ENST00000483495 NKX2-4Q9H2Z4 354 aa13.04□□□□□ -0.32
CPNE1-225ENST00000483495 EFCAB1Q9HAE3 211 aa13.04□□□□□ -0.32
CPNE1-225ENST00000483495 HPS4Q9NQG7 708 aa13.04□□□□□ -0.32
CPNE1-225ENST00000483495 THG1LQ9NWX6 298 aaKnown RBP13.04□□□□□ -0.32
CPNE1-225ENST00000483495 NDE1Q9NXR1 346 aa13.04□□□□□ -0.32
CPNE1-225ENST00000483495 CD84Q9UIB8 345 aa13.04□□□□□ -0.32
CPNE1-225ENST00000483495 PLXNB3Q9ULL4 1909 aa13.03□□□□□ -0.32
CPNE1-225ENST00000483495 C2orf16Q68DN1 1984 aa13.03□□□□□ -0.32
CPNE1-225ENST00000483495 ATP6AP2A0A1C7CYW4 349 aa13.03□□□□□ -0.32
CPNE1-225ENST00000483495 PSMD11O00231 422 aa13.03□□□□□ -0.32
CPNE1-225ENST00000483495 PSMD12O00232 456 aaPredicted RBP13.03□□□□□ -0.32
CPNE1-225ENST00000483495 AIM2O14862 343 aa13.03□□□□□ -0.32
CPNE1-225ENST00000483495 ATP6AP2O75787 350 aa13.03□□□□□ -0.32
CPNE1-225ENST00000483495 PRNPP04156 253 aa13.03□□□□□ -0.32
CPNE1-225ENST00000483495 ALDOCP09972 364 aaKnown RBP13.03□□□□□ -0.32
CPNE1-225ENST00000483495 PRR35P0CG20 571 aa13.03□□□□□ -0.32
CPNE1-225ENST00000483495 VCLP18206 1134 aa13.03□□□□□ -0.32
CPNE1-225ENST00000483495 CCR7P32248 378 aa13.03□□□□□ -0.32
CPNE1-225ENST00000483495 MRPL19P49406 292 aaKnown RBP13.03□□□□□ -0.32
CPNE1-225ENST00000483495 FASTKQ14296 549 aaKnown RBP13.03□□□□□ -0.32
CPNE1-225ENST00000483495 HNRNPA1L2Q32P51 320 aaKnown RBP13.03□□□□□ -0.32
CPNE1-225ENST00000483495 XKR7Q5GH72 579 aa13.03□□□□□ -0.32
CPNE1-225ENST00000483495 CDKL4Q5MAI5 379 aa13.03□□□□□ -0.32
CPNE1-225ENST00000483495 C9orf64Q5T6V5 341 aa13.03□□□□□ -0.32
CPNE1-225ENST00000483495 OGFOD2Q6N063 350 aa13.03□□□□□ -0.32
CPNE1-225ENST00000483495 Q6ZVL8 140 aa13.03□□□□□ -0.32
CPNE1-225ENST00000483495 PARS2Q7L3T8 475 aaKnown RBP13.03□□□□□ -0.32
CPNE1-225ENST00000483495 GET4Q7L5D6 327 aaPredicted RBP13.03□□□□□ -0.32
CPNE1-225ENST00000483495 MYLK4Q86YV6 388 aaPredicted RBP13.03□□□□□ -0.32
CPNE1-225ENST00000483495 PGAM4Q8N0Y7 254 aa13.03□□□□□ -0.32
CPNE1-225ENST00000483495 FBXW8Q8N3Y1 598 aa13.03□□□□□ -0.32
CPNE1-225ENST00000483495 DDHD1Q8NEL9 900 aa13.03□□□□□ -0.32
CPNE1-225ENST00000483495 TMIEQ8NEW7 156 aa13.03□□□□□ -0.32
CPNE1-225ENST00000483495 DLG3Q92796 817 aa13.03□□□□□ -0.32
CPNE1-225ENST00000483495 SCAMP4Q969E2 229 aa13.03□□□□□ -0.32
CPNE1-225ENST00000483495 ESAMQ96AP7 390 aa13.03□□□□□ -0.32
CPNE1-225ENST00000483495 RCN3Q96D15 328 aa13.03□□□□□ -0.32
CPNE1-225ENST00000483495 ZSCAN5AQ9BUG6 496 aa13.03□□□□□ -0.32
CPNE1-225ENST00000483495 POLG2Q9UHN1 485 aa13.03□□□□□ -0.32
CPNE1-225ENST00000483495 PRRC2BQ5JSZ5 2229 aaKnown RBP13.03□□□□□ -0.32
CPNE1-225ENST00000483495 MUC22E2RYF6 1773 aaPredicted RBP13.02□□□□□ -0.32
CPNE1-225ENST00000483495 EDDM13A0A1B0GTR0 161 aa13.02□□□□□ -0.32
CPNE1-225ENST00000483495 TAPBPO15533 448 aa13.02□□□□□ -0.32
CPNE1-225ENST00000483495 NUAK1O60285 661 aa13.02□□□□□ -0.32
CPNE1-225ENST00000483495 CRCPO75575 148 aa13.02□□□□□ -0.32
CPNE1-225ENST00000483495 KRT36O76013 467 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms