RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 ASPSCR1Q9BZE9 553 aa5.85□□□□□ -1.47
CSDE1-207ENST00000483407 SLC39A8Q9C0K1 460 aa5.85□□□□□ -1.47
CSDE1-207ENST00000483407 CDH19Q9H159 772 aa5.85□□□□□ -1.47
CSDE1-207ENST00000483407 NUP62CLQ9H1M0 184 aa5.85□□□□□ -1.47
CSDE1-207ENST00000483407 DHX35Q9H5Z1 703 aaKnown RBP5.85□□□□□ -1.47
CSDE1-207ENST00000483407 SUDS3Q9H7L9 328 aaPredicted RBP5.85□□□□□ -1.47
CSDE1-207ENST00000483407 LRRC4CQ9HCJ2 640 aa5.85□□□□□ -1.47
CSDE1-207ENST00000483407 TRNAU1APQ9NX07 287 aaKnown RBP5.85□□□□□ -1.47
CSDE1-207ENST00000483407 GOLGA6AQ9NYA3 693 aa5.85□□□□□ -1.47
CSDE1-207ENST00000483407 TAAR2Q9P1P5 351 aa5.85□□□□□ -1.47
CSDE1-207ENST00000483407 B4GALT6Q9UBX8 382 aa5.85□□□□□ -1.47
CSDE1-207ENST00000483407 DUSP13Q9UII6 198 aa5.85□□□□□ -1.47
CSDE1-207ENST00000483407 PCDHGA3Q9Y5H0 932 aa5.85□□□□□ -1.47
CSDE1-207ENST00000483407 CFAP46Q8IYW2 2715 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 IGHV5-10-1A0A0J9YXX1 117 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 TCRBV5S1A1TA0A578 114 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 ZNF891A8MT65 544 aaPredicted RBP5.84□□□□□ -1.47
CSDE1-207ENST00000483407 PSMD11O00231 422 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 TRAFD1O14545 582 aaPredicted RBP5.84□□□□□ -1.47
CSDE1-207ENST00000483407 EPHB6O15197 1021 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 SOCS5O75159 536 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 RNF8O76064 485 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 HEXIM1O94992 359 aaKnown RBP5.84□□□□□ -1.47
CSDE1-207ENST00000483407 ESR1P03372 595 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 S100BP04271 92 aaPredicted RBP5.84□□□□□ -1.47
CSDE1-207ENST00000483407 FGF1P05230 155 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 FGF3P11487 239 aaPredicted RBP5.84□□□□□ -1.47
CSDE1-207ENST00000483407 CCL4P13236 92 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 ERCC2P18074 760 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 WT1P19544 449 aaPredicted RBP5.84□□□□□ -1.47
CSDE1-207ENST00000483407 PSMA2P25787 234 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 AK4P27144 223 aaPredicted RBP5.84□□□□□ -1.47
CSDE1-207ENST00000483407 CD1CP29017 333 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 VIPR1P32241 457 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 MAN1A1P33908 653 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 UGT1A3P35503 534 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 ACTR1BP42025 376 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 CCR10P46092 362 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 GNPDA1P46926 289 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 LIMK2P53671 638 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 POLE2P56282 527 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 ACTR1AP61163 376 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 CDK3Q00526 305 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 TEKQ02763 1124 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 TLE1Q04724 770 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 IL10RBQ08334 325 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 ZNF235Q14590 738 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 NR1D2Q14995 579 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 CLCA4Q14CN2 919 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 KRT31Q15323 416 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 PPP6R3Q5H9R7 873 aaPredicted RBP5.84□□□□□ -1.47
CSDE1-207ENST00000483407 DCAF12Q5T6F0 453 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 ERMARDQ5T6L9 678 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 DENND2CQ68D51 928 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 RAET1GQ6H3X3 334 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 ACAD10Q6JQN1 1059 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 SLC30A9Q6PML9 568 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 RFX8Q6ZV50 586 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 TMPRSS9Q7Z410 1059 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 C17orf82Q86X59 251 aaPredicted RBP5.84□□□□□ -1.47
CSDE1-207ENST00000483407 FAM129CQ86XR2 697 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 PSTKQ8IV42 348 aaKnown RBP5.84□□□□□ -1.47
CSDE1-207ENST00000483407 SFTPA2Q8IWL1 248 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 NRSN1Q8IZ57 195 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 MCOLN2Q8IZK6 566 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 CACNA2D3Q8IZS8 1091 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 LZTR1Q8N653 840 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 OR4D9Q8NGE8 314 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 ZNF564Q8TBZ8 553 aaPredicted RBP5.84□□□□□ -1.47
CSDE1-207ENST00000483407 PDCD6IPQ8WUM4 868 aaKnown RBP5.84□□□□□ -1.47
CSDE1-207ENST00000483407 NSMCE1Q8WV22 266 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 HTR3CQ8WXA8 447 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 ART4Q93070 314 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 KIAA1143Q96AT1 154 aaPredicted RBP5.84□□□□□ -1.47
CSDE1-207ENST00000483407 DTD2Q96FN9 168 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 AHCYL2Q96HN2 611 aaKnown RBP5.84□□□□□ -1.47
CSDE1-207ENST00000483407 COQ10AQ96MF6 247 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 ZNF599Q96NL3 588 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 TEFMQ96QE5 360 aaKnown RBP5.84□□□□□ -1.47
CSDE1-207ENST00000483407 PSKH2Q96QS6 385 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 AGPAT1Q99943 283 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 FUCA2Q9BTY2 467 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 EFHD1Q9BUP0 239 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 DDA1Q9BW61 102 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 CDADC1Q9BWV3 514 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 TEX101Q9BY14 249 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 FRMD8Q9BZ67 464 aaPredicted RBP5.84□□□□□ -1.47
CSDE1-207ENST00000483407 ZWILCHQ9H900 591 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 SPATS2LQ9NUQ6 558 aaKnown RBP5.84□□□□□ -1.47
CSDE1-207ENST00000483407 PARVAQ9NVD7 372 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 GPATCH2LQ9NWQ4 482 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 SLC39A1Q9NY26 324 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 SAMD15Q9P1V8 674 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 TUBD1Q9UJT1 453 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 SUFUQ9UMX1 484 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 SIK3Q9Y2K2 1263 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 RP1P56715 2156 aa5.84□□□□□ -1.47
CSDE1-207ENST00000483407 TEX15Q9BXT5 2789 aa5.84□□□□□ -1.48
CSDE1-207ENST00000483407 AHCTF1Q8WYP5 2266 aa5.83□□□□□ -1.48
CSDE1-207ENST00000483407 IGHV1OR21-1A0A087WYE8 117 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms