RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 ZFPM2Q8WW38 1151 aa11.91□□□□□ -0.5
SQSTM1-207ENST00000481335 KRT35Q92764 455 aa11.91□□□□□ -0.5
SQSTM1-207ENST00000481335 CD180Q99467 661 aa11.91□□□□□ -0.5
SQSTM1-207ENST00000481335 OSBPL8Q9BZF1 889 aa11.91□□□□□ -0.5
SQSTM1-207ENST00000481335 FAM117AQ9C073 453 aa11.91□□□□□ -0.5
SQSTM1-207ENST00000481335 GOLPH3Q9H4A6 298 aa11.91□□□□□ -0.5
SQSTM1-207ENST00000481335 GPN2Q9H9Y4 310 aaPredicted RBP11.91□□□□□ -0.5
SQSTM1-207ENST00000481335 SEMA5BQ9P283 1151 aa11.91□□□□□ -0.5
SQSTM1-207ENST00000481335 EPN1Q9Y6I3 576 aaPredicted RBP11.91□□□□□ -0.5
SQSTM1-207ENST00000481335 PIKFYVEQ9Y2I7 2098 aa11.91□□□□□ -0.5
SQSTM1-207ENST00000481335 AGAP14A8MT82 685 aa11.9□□□□□ -0.5
SQSTM1-207ENST00000481335 GAPDHSO14556 408 aaPredicted RBP11.9□□□□□ -0.5
SQSTM1-207ENST00000481335 TJP3O95049 919 aa11.9□□□□□ -0.5
SQSTM1-207ENST00000481335 PRAMEF1O95521 474 aa11.9□□□□□ -0.5
SQSTM1-207ENST00000481335 CRTAMO95727 393 aa11.9□□□□□ -0.5
SQSTM1-207ENST00000481335 ITGB6P18564 788 aa11.9□□□□□ -0.5
SQSTM1-207ENST00000481335 LPOP22079 712 aaPredicted RBP11.9□□□□□ -0.5
SQSTM1-207ENST00000481335 RPL10P27635 214 aaKnown RBP11.9□□□□□ -0.5
SQSTM1-207ENST00000481335 RBL1P28749 1068 aa11.9□□□□□ -0.5
SQSTM1-207ENST00000481335 HADHAP40939 763 aa11.9□□□□□ -0.5
SQSTM1-207ENST00000481335 STAT5AP42229 794 aa11.9□□□□□ -0.5
SQSTM1-207ENST00000481335 GFERP55789 205 aa11.9□□□□□ -0.5
SQSTM1-207ENST00000481335 RWDD2BP57060 319 aa11.9□□□□□ -0.5
SQSTM1-207ENST00000481335 GPR18Q14330 331 aa11.9□□□□□ -0.5
SQSTM1-207ENST00000481335 CHRNA6Q15825 494 aa11.9□□□□□ -0.5
SQSTM1-207ENST00000481335 SEPT7Q16181 437 aaKnown RBP11.9□□□□□ -0.5
SQSTM1-207ENST00000481335 GPRC6AQ5T6X5 926 aa11.9□□□□□ -0.5
SQSTM1-207ENST00000481335 RANBP10Q6VN20 620 aa11.9□□□□□ -0.5
SQSTM1-207ENST00000481335 BPHLQ86WA6 291 aaPredicted RBP11.9□□□□□ -0.5
SQSTM1-207ENST00000481335 KMT5CQ86Y97 462 aa11.9□□□□□ -0.5
SQSTM1-207ENST00000481335 KLHDC8BQ8IXV7 354 aa11.9□□□□□ -0.5
SQSTM1-207ENST00000481335 SLC25A41Q8N5S1 370 aa11.9□□□□□ -0.5
SQSTM1-207ENST00000481335 RASGEF1AQ8N9B8 481 aa11.9□□□□□ -0.5
SQSTM1-207ENST00000481335 ACTL9Q8TC94 416 aa11.9□□□□□ -0.5
SQSTM1-207ENST00000481335 HEXDCQ8WVB3 486 aa11.9□□□□□ -0.5
SQSTM1-207ENST00000481335 JPH3Q8WXH2 748 aaPredicted RBP11.9□□□□□ -0.5
SQSTM1-207ENST00000481335 KLHL6Q8WZ60 621 aa11.9□□□□□ -0.5
SQSTM1-207ENST00000481335 UBXN4Q92575 508 aa11.9□□□□□ -0.5
SQSTM1-207ENST00000481335 ULK4Q96C45 1275 aa11.9□□□□□ -0.5
SQSTM1-207ENST00000481335 LINC00615Q96LM1 132 aaPredicted RBP11.9□□□□□ -0.5
SQSTM1-207ENST00000481335 FCRL4Q96PJ5 515 aa11.9□□□□□ -0.5
SQSTM1-207ENST00000481335 SLC25A18Q9H1K4 315 aa11.9□□□□□ -0.5
SQSTM1-207ENST00000481335 KLHL3Q9UH77 587 aa11.9□□□□□ -0.5
SQSTM1-207ENST00000481335 ACSL5Q9ULC5 683 aa11.9□□□□□ -0.5
SQSTM1-207ENST00000481335 SLC30A1Q9Y6M5 507 aa11.9□□□□□ -0.5
SQSTM1-207ENST00000481335 OR52A4PA6NMU1 304 aa11.89□□□□□ -0.51
SQSTM1-207ENST00000481335 SLC28A2O43868 658 aa11.89□□□□□ -0.51
SQSTM1-207ENST00000481335 POP7O75817 140 aaKnown RBP11.89□□□□□ -0.51
SQSTM1-207ENST00000481335 RASSF9O75901 435 aa11.89□□□□□ -0.51
SQSTM1-207ENST00000481335 RECKO95980 971 aa11.89□□□□□ -0.51
SQSTM1-207ENST00000481335 MT-ND3P03897 115 aa11.89□□□□□ -0.51
SQSTM1-207ENST00000481335 FAM87AP0C7U9 286 aa11.89□□□□□ -0.51
SQSTM1-207ENST00000481335 RBP3P10745 1247 aa11.89□□□□□ -0.51
SQSTM1-207ENST00000481335 RALBP11234 206 aa11.89□□□□□ -0.51
SQSTM1-207ENST00000481335 FGF5P12034 268 aa11.89□□□□□ -0.51
SQSTM1-207ENST00000481335 TYRP1P17643 537 aa11.89□□□□□ -0.51
SQSTM1-207ENST00000481335 MSH3P20585 1137 aa11.89□□□□□ -0.51
SQSTM1-207ENST00000481335 ADRA1AP35348 466 aa11.89□□□□□ -0.51
SQSTM1-207ENST00000481335 CCR10P46092 362 aa11.89□□□□□ -0.51
SQSTM1-207ENST00000481335 DRG2P55039 364 aaKnown RBP11.89□□□□□ -0.51
SQSTM1-207ENST00000481335 OTUD4Q01804 1114 aaKnown RBP11.89□□□□□ -0.51
SQSTM1-207ENST00000481335 NFATC3Q12968 1075 aa11.89□□□□□ -0.51
SQSTM1-207ENST00000481335 CLCA4Q14CN2 919 aa11.89□□□□□ -0.51
SQSTM1-207ENST00000481335 LLGL1Q15334 1064 aa11.89□□□□□ -0.51
SQSTM1-207ENST00000481335 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.89□□□□□ -0.518e-7■■□□□ 14.1
SQSTM1-207ENST00000481335 BCL7AQ4VC05 210 aa11.89□□□□□ -0.51
SQSTM1-207ENST00000481335 ANKRD20A2Q5SQ80 823 aa11.89□□□□□ -0.51
SQSTM1-207ENST00000481335 ANKRD20A1Q5TYW2 823 aa11.89□□□□□ -0.51
SQSTM1-207ENST00000481335 ANKRD20A3Q5VUR7 823 aa11.89□□□□□ -0.51
SQSTM1-207ENST00000481335 METRNLQ641Q3 311 aa11.89□□□□□ -0.51
SQSTM1-207ENST00000481335 TTC13Q8NBP0 860 aa11.89□□□□□ -0.51
SQSTM1-207ENST00000481335 OR2L2Q8NH16 312 aa11.89□□□□□ -0.51
SQSTM1-207ENST00000481335 ZNF398Q8TD17 642 aa11.89□□□□□ -0.51
SQSTM1-207ENST00000481335 UBE2Q2Q8WVN8 375 aa11.89□□□□□ -0.51
SQSTM1-207ENST00000481335 RSC1A1Q92681 617 aa11.89□□□□□ -0.51
SQSTM1-207ENST00000481335 SPATA13Q96N96 652 aa11.89□□□□□ -0.51
SQSTM1-207ENST00000481335 TGM7Q96PF1 710 aa11.89□□□□□ -0.51
SQSTM1-207ENST00000481335 CTRCQ99895 268 aa11.89□□□□□ -0.51
SQSTM1-207ENST00000481335 HEMGNQ9BXL5 484 aa11.89□□□□□ -0.51
SQSTM1-207ENST00000481335 ULBP3Q9BZM4 244 aa11.89□□□□□ -0.51
SQSTM1-207ENST00000481335 ARNT2Q9HBZ2 717 aa11.89□□□□□ -0.51
SQSTM1-207ENST00000481335 APMAPQ9HDC9 416 aa11.89□□□□□ -0.51
SQSTM1-207ENST00000481335 MACROD2A1Z1Q3 448 aa11.88□□□□□ -0.51
SQSTM1-207ENST00000481335 GOLGA6L9A6NEM1 432 aa11.88□□□□□ -0.51
SQSTM1-207ENST00000481335 MGAT4DA6NG13 374 aa11.88□□□□□ -0.51
SQSTM1-207ENST00000481335 SOWAHDA6NJG2 315 aa11.88□□□□□ -0.51
SQSTM1-207ENST00000481335 MIF4GDA9UHW6 222 aaKnown RBP11.88□□□□□ -0.51
SQSTM1-207ENST00000481335 CFAP99D6REC4 459 aa11.88□□□□□ -0.51
SQSTM1-207ENST00000481335 SRP72O76094 671 aaKnown RBP11.88□□□□□ -0.51
SQSTM1-207ENST00000481335 MTHFD1P11586 935 aaKnown RBP11.88□□□□□ -0.51
SQSTM1-207ENST00000481335 NELFEP18615 380 aaKnown RBP11.88□□□□□ -0.51
SQSTM1-207ENST00000481335 NDUFS1P28331 727 aa11.88□□□□□ -0.51
SQSTM1-207ENST00000481335 AKT1P31749 480 aa11.88□□□□□ -0.51
SQSTM1-207ENST00000481335 ZNF75DP51815 510 aa11.88□□□□□ -0.51
SQSTM1-207ENST00000481335 VAV2P52735 878 aa11.88□□□□□ -0.51
SQSTM1-207ENST00000481335 CTSCP53634 463 aa11.88□□□□□ -0.51
SQSTM1-207ENST00000481335 POLE2P56282 527 aa11.88□□□□□ -0.51
SQSTM1-207ENST00000481335 EIF3EP60228 445 aaKnown RBP11.88□□□□□ -0.51
SQSTM1-207ENST00000481335 FOXM1Q08050 763 aa11.88□□□□□ -0.51
SQSTM1-207ENST00000481335 CDC20Q12834 499 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms