RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 AKAP1Q92667 903 aaKnown RBP eCLIP9.46□□□□□ -0.96e-12■□□□□ 9.5
VEGFA-212ENST00000480614 PSKH2Q96QS6 385 aa9.46□□□□□ -0.9
VEGFA-212ENST00000480614 NEDD8-MDP1E9PL57 170 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 B3GALT2O43825 422 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 SLC35G6P0C7Q6 338 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 CD247P20963 164 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 E2F2Q14209 437 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 ZACNQ401N2 412 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 ZNF433Q8N7K0 673 aaPredicted RBP9.45□□□□□ -0.9
VEGFA-212ENST00000480614 ZNF548Q8NEK5 533 aaPredicted RBP9.45□□□□□ -0.9
VEGFA-212ENST00000480614 TESCQ96BS2 214 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 TCF25Q9BQ70 676 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 PDHA2P29803 388 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 AP1S1P61966 158 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 INO80EQ8NBZ0 244 aaPredicted RBP9.45□□□□□ -0.9
VEGFA-212ENST00000480614 CENPNQ96H22 339 aaPredicted RBP9.45□□□□□ -0.9
VEGFA-212ENST00000480614 RBM18Q96H35 190 aaKnown RBP9.45□□□□□ -0.9
VEGFA-212ENST00000480614 GBA3Q9H227 469 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 WDR37Q9Y2I8 494 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 ILVBLA1L0T0 632 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 TNFRSF11BO00300 401 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 NUAK1O60285 661 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 FADS2O95864 444 aaKnown RBP9.45□□□□□ -0.9
VEGFA-212ENST00000480614 AKR1D1P51857 326 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 INTS6LQ5JSJ4 861 aaKnown RBP9.45□□□□□ -0.9
VEGFA-212ENST00000480614 GPR107Q5VW38 600 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 C9orf57Q5W0N0 161 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 MED27Q6P2C8 311 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 CATSPERGQ6ZRH7 1159 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 GAL3ST3Q96A11 431 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 RGS17Q9UGC6 210 aaPredicted RBP9.45□□□□□ -0.9
VEGFA-212ENST00000480614 FBXO9Q9UK97 447 aaPredicted RBP9.45□□□□□ -0.9
VEGFA-212ENST00000480614 BTRCQ9Y297 605 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 SCN2AQ99250 2005 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 GRM5P41594 1212 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 KCNA10Q16322 511 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 ABCA11PQ4W5N1 156 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 ANO7Q6IWH7 933 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 OR4C6Q8NH72 309 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 AGAP11Q8TF27 550 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 SLC44A1Q8WWI5 657 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 PPM1MQ96MI6 270 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 SLC4A9Q96Q91 983 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 NUSAP1Q9BXS6 441 aaKnown RBP9.45□□□□□ -0.9
VEGFA-212ENST00000480614 SYN3O14994 580 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 FESP07332 822 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 BEX3Q00994 111 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 TMPRSS4Q9NRS4 437 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 PDP1Q9P0J1 537 aaPredicted RBP9.45□□□□□ -0.9
VEGFA-212ENST00000480614 RUVBL1Q9Y265 456 aaKnown RBP9.45□□□□□ -0.9
VEGFA-212ENST00000480614 KRT36O76013 467 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 BTN3A2P78410 334 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 RNASEH2BQ5TBB1 312 aaKnown RBP9.45□□□□□ -0.9
VEGFA-212ENST00000480614 MINDY2Q8NBR6 621 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 ZBED6CLQ96FA7 236 aaPredicted RBP9.45□□□□□ -0.9
VEGFA-212ENST00000480614 SEZ6LQ9BYH1 1024 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 S100A14Q9HCY8 104 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 CAPN14A8MX76 684 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 DRD4P21917 467 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 KCNJ2P63252 427 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 RBM20Q5T481 1227 aaKnown RBP9.45□□□□□ -0.9
VEGFA-212ENST00000480614 ZYG11AQ6WRX3 759 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 CHST4Q8NCG5 386 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 EZH1Q92800 747 aaPredicted RBP9.45□□□□□ -0.9
VEGFA-212ENST00000480614 IL17RBQ9NRM6 502 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 CADP27708 2225 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 SMIM35A0A1B0GVV1 85 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 TLR5O60602 858 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 VIPP01282 170 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 ADCYAP1R1P41586 468 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 TTMPQ5BVD1 217 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 HECTD2Q5U5R9 776 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 RAB2BQ8WUD1 216 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 SLC38A4Q969I6 547 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 LGR4Q9BXB1 951 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 EIF2B3Q9NR50 452 aaKnown RBP9.45□□□□□ -0.9
VEGFA-212ENST00000480614 RAI2Q9Y5P3 530 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 C3P01024 1663 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 B4GALT4O60513 344 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 ALPPL2P10696 532 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 CTPS1P17812 591 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 YBEYP58557 167 aaPredicted RBP9.45□□□□□ -0.9
VEGFA-212ENST00000480614 DPY19L1Q2PZI1 675 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 DNM1P34Q6PK57 102 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 NPNTQ6UXI9 565 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 TMEM17Q86X19 198 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 PRELID2Q8N945 189 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 OR2L3Q8NG85 312 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 FEM1CQ96JP0 617 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 CCDC115Q96NT0 180 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 PHF12Q96QT6 1004 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 KCNMB3Q9NPA1 279 aa9.45□□□□□ -0.9
VEGFA-212ENST00000480614 AP2A1O95782 977 aa9.44□□□□□ -0.9
VEGFA-212ENST00000480614 CRADDP78560 199 aa9.44□□□□□ -0.9
VEGFA-212ENST00000480614 MSANTD2Q6P1R3 559 aa9.44□□□□□ -0.9
VEGFA-212ENST00000480614 RHBDF2Q6PJF5 856 aa9.44□□□□□ -0.9
VEGFA-212ENST00000480614 FIP1L1Q6UN15 594 aaKnown RBP9.44□□□□□ -0.9
VEGFA-212ENST00000480614 C12orf50Q8NA57 414 aaPredicted RBP9.44□□□□□ -0.9
VEGFA-212ENST00000480614 ZNF527Q8NB42 609 aa9.44□□□□□ -0.9
VEGFA-212ENST00000480614 TSEN2Q8NCE0 465 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms