RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 ZNF106Q9H2Y7 1883 aaKnown RBP15.31■□□□□ 0.04
HMGA1-206ENST00000478214 CCDC187A0A096LP49 1063 aa15.3■□□□□ 0.04
HMGA1-206ENST00000478214 PRAMEF33A0A0G2JMD5 474 aa15.3■□□□□ 0.04
HMGA1-206ENST00000478214 GOLGA6L10A0A0M3HER8 536 aa15.3■□□□□ 0.04
HMGA1-206ENST00000478214 MGAT4DA6NG13 374 aa15.3■□□□□ 0.04
HMGA1-206ENST00000478214 OR52A4PA6NMU1 304 aa15.3■□□□□ 0.04
HMGA1-206ENST00000478214 TMX2-CTNND1H3BSU7 103 aa15.3■□□□□ 0.04
HMGA1-206ENST00000478214 AGRPO00253 132 aa15.3■□□□□ 0.04
HMGA1-206ENST00000478214 ZFC3H1O60293 1989 aaKnown RBP15.3■□□□□ 0.04
HMGA1-206ENST00000478214 VIPP01282 170 aa15.3■□□□□ 0.04
HMGA1-206ENST00000478214 ATP1B2P14415 290 aaPredicted RBP15.3■□□□□ 0.04
HMGA1-206ENST00000478214 HOXB3P14651 431 aaPredicted RBP15.3■□□□□ 0.04
HMGA1-206ENST00000478214 CCKBRP32239 447 aa15.3■□□□□ 0.04
HMGA1-206ENST00000478214 FOXN2P32314 431 aa15.3■□□□□ 0.04
HMGA1-206ENST00000478214 CSF2RBP32927 897 aa15.3■□□□□ 0.04
HMGA1-206ENST00000478214 CDK16Q00536 496 aa15.3■□□□□ 0.04
HMGA1-206ENST00000478214 CACNA1BQ00975 2339 aa15.3■□□□□ 0.04
HMGA1-206ENST00000478214 CFHR1Q03591 330 aa15.3■□□□□ 0.04
HMGA1-206ENST00000478214 ACVR1Q04771 509 aa15.3■□□□□ 0.04
HMGA1-206ENST00000478214 KCNJ11Q14654 390 aa15.3■□□□□ 0.04
HMGA1-206ENST00000478214 CLCA4Q14CN2 919 aa15.3■□□□□ 0.04
HMGA1-206ENST00000478214 PCID2Q5JVF3 399 aa15.3■□□□□ 0.04
HMGA1-206ENST00000478214 ANKRD22Q5VYY1 191 aa15.3■□□□□ 0.04
HMGA1-206ENST00000478214 PAPD7Q5XG87 772 aaKnown RBP15.3■□□□□ 0.04
HMGA1-206ENST00000478214 FOXR1Q6PIV2 292 aa15.3■□□□□ 0.04
HMGA1-206ENST00000478214 ZNF574Q6ZN55 896 aaPredicted RBP15.3■□□□□ 0.04
HMGA1-206ENST00000478214 ZNF534Q76KX8 674 aa15.3■□□□□ 0.04
HMGA1-206ENST00000478214 NLRP9Q7RTR0 991 aa15.3■□□□□ 0.04
HMGA1-206ENST00000478214 TRIM48Q8IWZ4 208 aa15.3■□□□□ 0.04
HMGA1-206ENST00000478214 PPHLN1Q8NEY8 458 aaKnown RBP15.3■□□□□ 0.04
HMGA1-206ENST00000478214 WDR36Q8NI36 951 aaKnown RBP15.3■□□□□ 0.04
HMGA1-206ENST00000478214 HEXDCQ8WVB3 486 aa15.3■□□□□ 0.04
HMGA1-206ENST00000478214 SH3KBP1Q96B97 665 aa15.3■□□□□ 0.04
HMGA1-206ENST00000478214 LIN37Q96GY3 246 aaPredicted RBP15.3■□□□□ 0.04
HMGA1-206ENST00000478214 PRR11Q96HE9 360 aaPredicted RBP15.3■□□□□ 0.04
HMGA1-206ENST00000478214 NAPGQ99747 312 aaPredicted RBP15.3■□□□□ 0.04
HMGA1-206ENST00000478214 STRADBQ9C0K7 418 aa15.3■□□□□ 0.04
HMGA1-206ENST00000478214 CHRAC1Q9NRG0 131 aa15.3■□□□□ 0.04
HMGA1-206ENST00000478214 FAM8A1Q9UBU6 413 aa15.3■□□□□ 0.04
HMGA1-206ENST00000478214 PSMD13Q9UNM6 376 aa15.3■□□□□ 0.04
HMGA1-206ENST00000478214 KMT2BQ9UMN6 2715 aaPredicted RBP15.29■□□□□ 0.04
HMGA1-206ENST00000478214 FANCGO15287 622 aa15.29■□□□□ 0.04
HMGA1-206ENST00000478214 TLX3O43711 291 aaPredicted RBP15.29■□□□□ 0.04
HMGA1-206ENST00000478214 GOT2P00505 430 aaKnown RBP15.29■□□□□ 0.04
HMGA1-206ENST00000478214 MGAT1P26572 445 aa15.29■□□□□ 0.04
HMGA1-206ENST00000478214 MAGEA6P43360 314 aa15.29■□□□□ 0.04
HMGA1-206ENST00000478214 NPY2RP49146 381 aa15.29■□□□□ 0.04
HMGA1-206ENST00000478214 FNTAP49354 379 aa15.29■□□□□ 0.04
HMGA1-206ENST00000478214 PPM1FP49593 454 aaPredicted RBP15.29■□□□□ 0.04
HMGA1-206ENST00000478214 PRLHRP49683 370 aa15.29■□□□□ 0.04
HMGA1-206ENST00000478214 GPLD1P80108 840 aa15.29■□□□□ 0.04
HMGA1-206ENST00000478214 SQSTM1Q13501 440 aa15.29■□□□□ 0.04
HMGA1-206ENST00000478214 CLPPQ16740 277 aaPredicted RBP15.29■□□□□ 0.04
HMGA1-206ENST00000478214 PHF19Q5T6S3 580 aa15.29■□□□□ 0.04
HMGA1-206ENST00000478214 METRNLQ641Q3 311 aa15.29■□□□□ 0.04
HMGA1-206ENST00000478214 LRRC8BQ6P9F7 803 aa15.29■□□□□ 0.04
HMGA1-206ENST00000478214 AFTPHQ6ULP2 937 aa15.29■□□□□ 0.04
HMGA1-206ENST00000478214 XKR5Q6UX68 686 aa15.29■□□□□ 0.04
HMGA1-206ENST00000478214 C17orf53Q8N3J3 647 aaPredicted RBP15.29■□□□□ 0.04
HMGA1-206ENST00000478214 CLDN19Q8N6F1 224 aa15.29■□□□□ 0.04
HMGA1-206ENST00000478214 AVL9Q8NBF6 648 aa15.29■□□□□ 0.04
HMGA1-206ENST00000478214 OR6P1Q8NGX9 317 aa15.29■□□□□ 0.04
HMGA1-206ENST00000478214 OR2L2Q8NH16 312 aa15.29■□□□□ 0.04
HMGA1-206ENST00000478214 OR10G6Q8NH81 332 aa15.29■□□□□ 0.04
HMGA1-206ENST00000478214 AHCYL2Q96HN2 611 aaKnown RBP15.29■□□□□ 0.04
HMGA1-206ENST00000478214 CAPZA3Q96KX2 299 aa15.29■□□□□ 0.04
HMGA1-206ENST00000478214 LINC00615Q96LM1 132 aaPredicted RBP15.29■□□□□ 0.04
HMGA1-206ENST00000478214 TBC1D10AQ9BXI6 508 aa15.29■□□□□ 0.04
HMGA1-206ENST00000478214 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.29■□□□□ 0.04
HMGA1-206ENST00000478214 IL22Q9GZX6 179 aa15.29■□□□□ 0.04
HMGA1-206ENST00000478214 BFARQ9NZS9 450 aa15.29■□□□□ 0.04
HMGA1-206ENST00000478214 TMEM9Q9P0T7 183 aa15.29■□□□□ 0.04
HMGA1-206ENST00000478214 PCDHGA8Q9Y5G5 932 aa15.29■□□□□ 0.04
HMGA1-206ENST00000478214 IGHV5-10-1A0A0J9YXX1 117 aa15.28■□□□□ 0.04
HMGA1-206ENST00000478214 CTAGE9A4FU28 777 aa15.28■□□□□ 0.04
HMGA1-206ENST00000478214 LILRA5A6NI73 299 aa15.28■□□□□ 0.04
HMGA1-206ENST00000478214 AP3B1O00203 1094 aa15.28■□□□□ 0.04
HMGA1-206ENST00000478214 PLD2O14939 933 aa15.28■□□□□ 0.04
HMGA1-206ENST00000478214 DXOO77932 396 aaKnown RBP15.28■□□□□ 0.04
HMGA1-206ENST00000478214 TMEM63AO94886 807 aa15.28■□□□□ 0.04
HMGA1-206ENST00000478214 HGFP14210 728 aa15.28■□□□□ 0.04
HMGA1-206ENST00000478214 MPSTP25325 297 aa15.28■□□□□ 0.04
HMGA1-206ENST00000478214 HALP42357 657 aa15.28■□□□□ 0.04
HMGA1-206ENST00000478214 MAPK9P45984 424 aa15.28■□□□□ 0.04
HMGA1-206ENST00000478214 TBC1D25Q3MII6 688 aa15.28■□□□□ 0.04
HMGA1-206ENST00000478214 TMEM26Q6ZUK4 368 aa15.28■□□□□ 0.04
HMGA1-206ENST00000478214 RAB11FIP2Q7L804 512 aa15.28■□□□□ 0.04
HMGA1-206ENST00000478214 CREG2Q8IUH2 290 aa15.28■□□□□ 0.04
HMGA1-206ENST00000478214 CFAP206Q8IYR0 622 aa15.28■□□□□ 0.04
HMGA1-206ENST00000478214 LSMEM2Q8N112 164 aa15.28■□□□□ 0.04
HMGA1-206ENST00000478214 FBXO39Q8N4B4 442 aa15.28■□□□□ 0.04
HMGA1-206ENST00000478214 LILRA3Q8N6C8 439 aaPredicted RBP15.28■□□□□ 0.04
HMGA1-206ENST00000478214 OR4D9Q8NGE8 314 aa15.28■□□□□ 0.04
HMGA1-206ENST00000478214 OR4L1Q8NH43 312 aa15.28■□□□□ 0.04
HMGA1-206ENST00000478214 GRK7Q8WTQ7 553 aa15.28■□□□□ 0.04
HMGA1-206ENST00000478214 CPT1BQ92523 772 aa15.28■□□□□ 0.04
HMGA1-206ENST00000478214 PEX13Q92968 403 aa15.28■□□□□ 0.04
HMGA1-206ENST00000478214 CXorf40BQ96DE9 158 aa15.28■□□□□ 0.04
HMGA1-206ENST00000478214 ZMYND15Q9H091 742 aa15.28■□□□□ 0.04
HMGA1-206ENST00000478214 WWP1Q9H0M0 922 aa15.28■□□□□ 0.04
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