RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 C16orf72Q14CZ0 275 aa23.59■■□□□ 1.37
CPNE1-223ENST00000475146 GPR33Q49SQ1 333 aa23.59■■□□□ 1.37
CPNE1-223ENST00000475146 FAM83HQ6ZRV2 1179 aaPredicted RBP23.59■■□□□ 1.37
CPNE1-223ENST00000475146 TAS2R42Q7RTR8 314 aa23.59■■□□□ 1.37
CPNE1-223ENST00000475146 SLC35F6Q8N357 371 aa23.59■■□□□ 1.37
CPNE1-223ENST00000475146 PRELID2Q8N945 189 aa23.59■■□□□ 1.37
CPNE1-223ENST00000475146 CDKN2AIPNLQ96HQ2 116 aa23.59■■□□□ 1.37
CPNE1-223ENST00000475146 PBKQ96KB5 322 aa23.59■■□□□ 1.37
CPNE1-223ENST00000475146 TBC1D10AQ9BXI6 508 aa23.59■■□□□ 1.37
CPNE1-223ENST00000475146 POT1Q9NUX5 634 aa23.59■■□□□ 1.37
CPNE1-223ENST00000475146 FAM8A1Q9UBU6 413 aa23.59■■□□□ 1.37
CPNE1-223ENST00000475146 LHX6Q9UPM6 363 aa23.59■■□□□ 1.37
CPNE1-223ENST00000475146 WDR37Q9Y2I8 494 aa23.59■■□□□ 1.37
CPNE1-223ENST00000475146 HEATR9A2RTY3 570 aa23.58■■□□□ 1.37
CPNE1-223ENST00000475146 MROH6A6NGR9 719 aa23.58■■□□□ 1.37
CPNE1-223ENST00000475146 LILRA5A6NI73 299 aa23.58■■□□□ 1.37
CPNE1-223ENST00000475146 CDRT15L2A8MXV6 281 aa23.58■■□□□ 1.37
CPNE1-223ENST00000475146 ITIH1P19827 911 aa23.58■■□□□ 1.37
CPNE1-223ENST00000475146 MSNP26038 577 aaKnown RBP23.58■■□□□ 1.37
CPNE1-223ENST00000475146 CDKN1CP49918 316 aaPredicted RBP23.58■■□□□ 1.37
CPNE1-223ENST00000475146 TRA2AQ13595 282 aaKnown RBP eCLIP23.58■■□□□ 1.37
CPNE1-223ENST00000475146 SKIDA1Q1XH10 827 aa23.58■■□□□ 1.37
CPNE1-223ENST00000475146 BCL7AQ4VC05 210 aa23.58■■□□□ 1.37
CPNE1-223ENST00000475146 TMEM71Q6P5X7 295 aa23.58■■□□□ 1.37
CPNE1-223ENST00000475146 C4orf22Q6V702 233 aa23.58■■□□□ 1.37
CPNE1-223ENST00000475146 TMEM26Q6ZUK4 368 aa23.58■■□□□ 1.37
CPNE1-223ENST00000475146 HEXDCQ8WVB3 486 aa23.58■■□□□ 1.37
CPNE1-223ENST00000475146 NCSTNQ92542 709 aa23.58■■□□□ 1.37
CPNE1-223ENST00000475146 CCDC97Q96F63 343 aaPredicted RBP23.58■■□□□ 1.37
CPNE1-223ENST00000475146 CASS4Q9NQ75 786 aa23.58■■□□□ 1.37
CPNE1-223ENST00000475146 ZDHHC3Q9NYG2 299 aa23.58■■□□□ 1.37
CPNE1-223ENST00000475146 PSMD13Q9UNM6 376 aa23.58■■□□□ 1.37
CPNE1-223ENST00000475146 ANKRD11Q6UB99 2663 aaPredicted RBP23.58■■□□□ 1.37
CPNE1-223ENST00000475146 PKD1L2Q7Z442 2459 aa23.58■■□□□ 1.37
CPNE1-223ENST00000475146 DMXL2Q8TDJ6 3036 aa23.58■■□□□ 1.37
CPNE1-223ENST00000475146 HGSO14964 777 aaPredicted RBP23.57■■□□□ 1.36
CPNE1-223ENST00000475146 KIF5CO60282 957 aa23.57■■□□□ 1.36
CPNE1-223ENST00000475146 PRSS56P0CW18 603 aa23.57■■□□□ 1.36
CPNE1-223ENST00000475146 THRAP10827 490 aa23.57■■□□□ 1.36
CPNE1-223ENST00000475146 ARSDP51689 593 aa23.57■■□□□ 1.36
CPNE1-223ENST00000475146 MAPK10P53779 464 aa23.57■■□□□ 1.36
CPNE1-223ENST00000475146 CACNG1Q06432 222 aa23.57■■□□□ 1.36
CPNE1-223ENST00000475146 LAMB3Q13751 1172 aa23.57■■□□□ 1.36
CPNE1-223ENST00000475146 CLCA4Q14CN2 919 aa23.57■■□□□ 1.36
CPNE1-223ENST00000475146 SNAP47Q5SQN1 464 aa23.57■■□□□ 1.36
CPNE1-223ENST00000475146 CLEC14AQ86T13 490 aa23.57■■□□□ 1.36
CPNE1-223ENST00000475146 SERPINA9Q86WD7 417 aa23.57■■□□□ 1.36
CPNE1-223ENST00000475146 RASGEF1CQ8N431 466 aa23.57■■□□□ 1.36
CPNE1-223ENST00000475146 KCNE4Q8WWG9 221 aa23.57■■□□□ 1.36
CPNE1-223ENST00000475146 MS4A14Q96JA4 679 aa23.57■■□□□ 1.36
CPNE1-223ENST00000475146 EPB41L1Q9H4G0 881 aa23.57■■□□□ 1.36
CPNE1-223ENST00000475146 UCK1Q9HA47 277 aa23.57■■□□□ 1.36
CPNE1-223ENST00000475146 WDFY3Q8IZQ1 3526 aa23.56■■□□□ 1.36
CPNE1-223ENST00000475146 TRBV5-4A0A0C4DH59 114 aa23.56■■□□□ 1.36
CPNE1-223ENST00000475146 MGAT4DA6NG13 374 aa23.56■■□□□ 1.36
CPNE1-223ENST00000475146 ATP1B2P14415 290 aaPredicted RBP23.56■■□□□ 1.36
CPNE1-223ENST00000475146 ACRV1P26436 265 aa23.56■■□□□ 1.36
CPNE1-223ENST00000475146 KCTD19Q17RG1 926 aaPredicted RBP23.56■■□□□ 1.36
CPNE1-223ENST00000475146 SPACA3Q8IXA5 215 aa23.56■■□□□ 1.36
CPNE1-223ENST00000475146 EIF2B3Q9NR50 452 aaKnown RBP23.56■■□□□ 1.36
CPNE1-223ENST00000475146 PRAMEF33A0A0G2JMD5 474 aa23.55■■□□□ 1.36
CPNE1-223ENST00000475146 KLHL33A6NCF5 533 aa23.55■■□□□ 1.36
CPNE1-223ENST00000475146 OR51F1A6NGY5 319 aa23.55■■□□□ 1.36
CPNE1-223ENST00000475146 SGTAO43765 313 aa23.55■■□□□ 1.36
CPNE1-223ENST00000475146 ADRA1DP25100 572 aa23.55■■□□□ 1.36
CPNE1-223ENST00000475146 SLC5A2P31639 672 aa23.55■■□□□ 1.36
CPNE1-223ENST00000475146 CSTF2P33240 577 aaKnown RBP eCLIP23.55■■□□□ 1.36
CPNE1-223ENST00000475146 ETV5P41161 510 aa23.55■■□□□ 1.36
CPNE1-223ENST00000475146 PRLHRP49683 370 aa23.55■■□□□ 1.36
CPNE1-223ENST00000475146 TRIP13Q15645 432 aaPredicted RBP23.55■■□□□ 1.36
CPNE1-223ENST00000475146 TSTD2Q5T7W7 516 aa23.55■■□□□ 1.36
CPNE1-223ENST00000475146 WDR74Q6RFH5 385 aaPredicted RBP23.55■■□□□ 1.36
CPNE1-223ENST00000475146 AGBL5Q8NDL9 886 aa23.55■■□□□ 1.36
CPNE1-223ENST00000475146 PPHLN1Q8NEY8 458 aaKnown RBP23.55■■□□□ 1.36
CPNE1-223ENST00000475146 OR2L2Q8NH16 312 aa23.55■■□□□ 1.36
CPNE1-223ENST00000475146 MAGOHBQ96A72 148 aaKnown RBP23.55■■□□□ 1.36
CPNE1-223ENST00000475146 RANBP9Q96S59 729 aa23.55■■□□□ 1.36
CPNE1-223ENST00000475146 NAP1L3Q99457 506 aaPredicted RBP23.55■■□□□ 1.36
CPNE1-223ENST00000475146 AP1M1Q9BXS5 423 aa23.55■■□□□ 1.36
CPNE1-223ENST00000475146 IMP3Q9NV31 184 aaKnown RBP23.55■■□□□ 1.36
CPNE1-223ENST00000475146 KLHL3Q9UH77 587 aa23.55■■□□□ 1.36
CPNE1-223ENST00000475146 PCDHGA7Q9Y5G6 932 aa23.55■■□□□ 1.36
CPNE1-223ENST00000475146 CCDC162PA2VCL2 907 aa23.54■■□□□ 1.36
CPNE1-223ENST00000475146 A8MU76 341 aa23.54■■□□□ 1.36
CPNE1-223ENST00000475146 PGRMC1O00264 195 aaKnown RBP23.54■■□□□ 1.36
CPNE1-223ENST00000475146 UBXN7O94888 489 aa23.54■■□□□ 1.36
CPNE1-223ENST00000475146 CCL4P13236 92 aa23.54■■□□□ 1.36
CPNE1-223ENST00000475146 TYRP1P17643 537 aa23.54■■□□□ 1.36
CPNE1-223ENST00000475146 AMD1P17707 334 aa23.54■■□□□ 1.36
CPNE1-223ENST00000475146 VPS41P49754 854 aa23.54■■□□□ 1.36
CPNE1-223ENST00000475146 SESN2P58004 480 aaPredicted RBP23.54■■□□□ 1.36
CPNE1-223ENST00000475146 RPE65Q16518 533 aa23.54■■□□□ 1.36
CPNE1-223ENST00000475146 DBN1Q16643 649 aa23.54■■□□□ 1.36
CPNE1-223ENST00000475146 METRNLQ641Q3 311 aa23.54■■□□□ 1.36
CPNE1-223ENST00000475146 RBM12BQ8IXT5 1001 aaKnown RBP23.54■■□□□ 1.36
CPNE1-223ENST00000475146 PIANPQ8IYJ0 282 aa23.54■■□□□ 1.36
CPNE1-223ENST00000475146 OR13J1Q8NGT2 312 aa23.54■■□□□ 1.36
CPNE1-223ENST00000475146 TBRG4Q969Z0 631 aaKnown RBP eCLIP23.54■■□□□ 1.362e-6■■■■■ 26.8
CPNE1-223ENST00000475146 PDLIM2Q96JY6 352 aa23.54■■□□□ 1.36
CPNE1-223ENST00000475146 LINC00615Q96LM1 132 aaPredicted RBP23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms