RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 TPGS2Q68CL5 300 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 UGT3A1Q6NUS8 523 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 TTLL10Q6ZVT0 673 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 ADGRG6Q86SQ4 1221 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 DHDDSQ86SQ9 333 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 ITIH5Q86UX2 942 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 SNX32Q86XE0 403 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 MYLK4Q86YV6 388 aaPredicted RBP5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 STK40Q8N2I9 435 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 NKAPQ8N5F7 415 aaKnown RBP5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 SLC43A3Q8NBI5 491 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 GPR150Q8NGU9 434 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 DTX3LQ8TDB6 740 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 BRSK1Q8TDC3 778 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 BLOC1S5Q8TDH9 187 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 HEXDCQ8WVB3 486 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 DPF3Q92784 378 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 HDAC10Q969S8 669 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 CCDC124Q96CT7 223 aaKnown RBP5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 PRR11Q96HE9 360 aaPredicted RBP5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 SHDQ96IW2 340 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 ZNF333Q96JL9 665 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 LRGUKQ96M69 825 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 ZNF778Q96MU6 729 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 KLHL5Q96PQ7 755 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 NR1H4Q96RI1 486 aaPredicted RBP5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 OMDQ99983 421 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 EFHD1Q9BUP0 239 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 TTLL2Q9BWV7 592 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 C1QTNF1Q9BXJ1 281 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 NUF2Q9BZD4 464 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 TRIM15Q9C019 465 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 KLHL25Q9H0H3 589 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 CXorf56Q9H5V9 222 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 S100A14Q9HCY8 104 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 NMRK1Q9NWW6 199 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 RNF186Q9NXI6 227 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 TAS2R13Q9NYV9 303 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 NKX1-2Q9UD57 310 aaPredicted RBP5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 STK39Q9UEW8 545 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 SLC2A6Q9UGQ3 507 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 SLC7A8Q9UHI5 535 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 CDH22Q9UJ99 828 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 LSM7Q9UK45 103 aaKnown RBP5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 MAFFQ9ULX9 164 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 BACE2Q9Y5Z0 518 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 IRAK3Q9Y616 596 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 COMMD10Q9Y6G5 202 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 PATJQ8NI35 1801 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 LOC285095A0A1B0GVY8 99 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 UBA6A0AVT1 1052 aaPredicted RBP5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 ILVBLA1L0T0 632 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 MAGEA13PA6NCF6 341 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 MROH6A6NGR9 719 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 A8MT66 165 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 BBIP1A8MTZ0 92 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 NUDT19A8MXV4 375 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 SUPT3HB4E1H0 165 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 F8W810 466 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 PRRG1O14668 218 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 STX7O15400 261 aaKnown RBP5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 INSIG1O15503 277 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 KDELR3O43731 214 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 SNX2O60749 519 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 SUPT3HO75486 399 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 SRP72O76094 671 aaKnown RBP5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 CNTN5O94779 1100 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 RHOBTB1O94844 696 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 SUPT7LO94864 414 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 SLC4A1P02730 911 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 GFAPP14136 432 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 IFNGR1P15260 489 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 ITGAXP20702 1163 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 IMPDH1P20839 514 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 FDXRP22570 491 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 ME2P23368 584 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 TTPAP49638 278 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 ATP4BP51164 291 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 EPHB3P54753 998 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 RPL26P61254 145 aaKnown RBP5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 NFKB2Q00653 900 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 TUBB3Q13509 450 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 BLMHQ13867 455 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 FLOT2Q14254 428 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 SSPNQ14714 243 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 CBX2Q14781 532 aaPredicted RBP5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 RPS6KA2Q15349 733 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 DEFB115Q30KQ5 88 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 LSM12Q3MHD2 195 aaKnown RBP5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 C5orf22Q49AR2 442 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 PABPC1LQ4VXU2 614 aaKnown RBP5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 ALFQ53S48 1182 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 TECRLQ5HYJ1 363 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 VWA5B1Q5TIE3 1220 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 CAPRIN2Q6IMN6 1127 aaKnown RBP5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 PRMT9Q6P2P2 845 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 CNSTQ6PJW8 725 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 NAPRTQ6XQN6 538 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 FRMD7Q6ZUT3 714 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms