RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 ZNF514Q96K75 400 aaPredicted RBP12.34□□□□□ -0.43
TRAF4-209ENST00000473421 MRPL47Q9HD33 250 aaKnown RBP12.34□□□□□ -0.43
TRAF4-209ENST00000473421 PDE7BQ9NP56 450 aa12.34□□□□□ -0.43
TRAF4-209ENST00000473421 WASH6PQ9NQA3 447 aa12.34□□□□□ -0.43
TRAF4-209ENST00000473421 RTN4Q9NQC3 1192 aaKnown RBP12.34□□□□□ -0.43
TRAF4-209ENST00000473421 ASF1BQ9NVP2 202 aa12.34□□□□□ -0.43
TRAF4-209ENST00000473421 MAP10Q9P2G4 905 aa12.34□□□□□ -0.43
TRAF4-209ENST00000473421 ANAPC7Q9UJX3 599 aa12.34□□□□□ -0.43
TRAF4-209ENST00000473421 DNPEPQ9ULA0 475 aa12.34□□□□□ -0.43
TRAF4-209ENST00000473421 MYO6Q9UM54 1294 aa12.34□□□□□ -0.43
TRAF4-209ENST00000473421 ZNF711Q9Y462 761 aa12.34□□□□□ -0.43
TRAF4-209ENST00000473421 UGT1A9O60656 530 aa12.33□□□□□ -0.44
TRAF4-209ENST00000473421 MT-ND3P03897 115 aa12.33□□□□□ -0.44
TRAF4-209ENST00000473421 UGT1A6P19224 532 aa12.33□□□□□ -0.44
TRAF4-209ENST00000473421 LPOP22079 712 aaPredicted RBP12.33□□□□□ -0.44
TRAF4-209ENST00000473421 IDSP22304 550 aa12.33□□□□□ -0.44
TRAF4-209ENST00000473421 UGT1A1P22309 533 aa12.33□□□□□ -0.44
TRAF4-209ENST00000473421 UGT1A4P22310 534 aa12.33□□□□□ -0.44
TRAF4-209ENST00000473421 CES1P23141 567 aa12.33□□□□□ -0.44
TRAF4-209ENST00000473421 DCDC1P59894 354 aa12.33□□□□□ -0.44
TRAF4-209ENST00000473421 RPS15P62841 145 aaKnown RBP12.33□□□□□ -0.44
TRAF4-209ENST00000473421 KLHL30Q0D2K2 578 aa12.33□□□□□ -0.44
TRAF4-209ENST00000473421 TMEM115Q12893 351 aaPredicted RBP12.33□□□□□ -0.44
TRAF4-209ENST00000473421 CHRNA6Q15825 494 aa12.33□□□□□ -0.44
TRAF4-209ENST00000473421 PCSK7Q16549 785 aa12.33□□□□□ -0.44
TRAF4-209ENST00000473421 HGSNATQ68CP4 663 aa12.33□□□□□ -0.44
TRAF4-209ENST00000473421 TIGD7Q6NT04 549 aaPredicted RBP12.33□□□□□ -0.44
TRAF4-209ENST00000473421 D2HGDHQ8N465 521 aa12.33□□□□□ -0.44
TRAF4-209ENST00000473421 CISD2Q8N5K1 135 aaKnown RBP12.33□□□□□ -0.44
TRAF4-209ENST00000473421 ENDOVQ8N8Q3 282 aaKnown RBP12.33□□□□□ -0.44
TRAF4-209ENST00000473421 RASGEF1AQ8N9B8 481 aa12.33□□□□□ -0.44
TRAF4-209ENST00000473421 SPATA22Q8NHS9 363 aa12.33□□□□□ -0.44
TRAF4-209ENST00000473421 INPP5DQ92835 1189 aa12.33□□□□□ -0.44
TRAF4-209ENST00000473421 NAP1L5Q96NT1 182 aaPredicted RBP12.33□□□□□ -0.44
TRAF4-209ENST00000473421 ZSCAN5AQ9BUG6 496 aa12.33□□□□□ -0.44
TRAF4-209ENST00000473421 UGT1A7Q9HAW7 530 aa12.33□□□□□ -0.44
TRAF4-209ENST00000473421 UGT1A10Q9HAW8 530 aa12.33□□□□□ -0.44
TRAF4-209ENST00000473421 UGT1A8Q9HAW9 530 aa12.33□□□□□ -0.44
TRAF4-209ENST00000473421 NTNG1Q9Y2I2 539 aa12.33□□□□□ -0.44
TRAF4-209ENST00000473421 SEC16AO15027 2179 aa12.33□□□□□ -0.44
TRAF4-209ENST00000473421 GPR89AB7ZAQ6 455 aa12.32□□□□□ -0.44
TRAF4-209ENST00000473421 SCRG1O75711 98 aa12.32□□□□□ -0.44
TRAF4-209ENST00000473421 POP7O75817 140 aaKnown RBP12.32□□□□□ -0.44
TRAF4-209ENST00000473421 TMEM63AO94886 807 aa12.32□□□□□ -0.44
TRAF4-209ENST00000473421 DDAH2O95865 285 aa12.32□□□□□ -0.44
TRAF4-209ENST00000473421 MT-CYBP00156 380 aaPredicted RBP12.32□□□□□ -0.44
TRAF4-209ENST00000473421 GPR89BP0CG08 455 aa12.32□□□□□ -0.44
TRAF4-209ENST00000473421 MYBL1P10243 752 aa12.32□□□□□ -0.44
TRAF4-209ENST00000473421 SSR1P43307 286 aaKnown RBP12.32□□□□□ -0.44
TRAF4-209ENST00000473421 KPNA2P52292 529 aaKnown RBP12.32□□□□□ -0.44
TRAF4-209ENST00000473421 NFE2L1Q14494 772 aa12.32□□□□□ -0.44
TRAF4-209ENST00000473421 ZNF789Q5FWF6 425 aa12.32□□□□□ -0.44
TRAF4-209ENST00000473421 CCDC183Q5T5S1 534 aa12.32□□□□□ -0.44
TRAF4-209ENST00000473421 IZUMO3Q5VZ72 239 aa12.32□□□□□ -0.44
TRAF4-209ENST00000473421 PPP1R2P3Q6NXS1 205 aa12.32□□□□□ -0.44
TRAF4-209ENST00000473421 FAM198BQ6UWH4 519 aa12.32□□□□□ -0.44
TRAF4-209ENST00000473421 MICALCLQ6ZW33 695 aa12.32□□□□□ -0.44
TRAF4-209ENST00000473421 TICAM1Q8IUC6 712 aa12.32□□□□□ -0.44
TRAF4-209ENST00000473421 TRAPPC5Q8IUR0 188 aa12.32□□□□□ -0.44
TRAF4-209ENST00000473421 TMEM126BQ8IUX1 230 aa12.32□□□□□ -0.44
TRAF4-209ENST00000473421 CCNYQ8ND76 341 aa12.32□□□□□ -0.44
TRAF4-209ENST00000473421 SPDYE1Q8NFV5 336 aaPredicted RBP12.32□□□□□ -0.44
TRAF4-209ENST00000473421 RAPGEF5Q92565 580 aa12.32□□□□□ -0.44
TRAF4-209ENST00000473421 UBXN4Q92575 508 aa12.32□□□□□ -0.44
TRAF4-209ENST00000473421 TADA1Q96BN2 335 aa12.32□□□□□ -0.44
TRAF4-209ENST00000473421 FAF2Q96CS3 445 aa12.32□□□□□ -0.44
TRAF4-209ENST00000473421 IMP4Q96G21 291 aaKnown RBP12.32□□□□□ -0.44
TRAF4-209ENST00000473421 FCRL4Q96PJ5 515 aa12.32□□□□□ -0.44
TRAF4-209ENST00000473421 TLR10Q9BXR5 811 aa12.32□□□□□ -0.44
TRAF4-209ENST00000473421 ZBTB20Q9HC78 741 aaPredicted RBP12.32□□□□□ -0.44
TRAF4-209ENST00000473421 MAGEE1Q9HCI5 957 aa12.32□□□□□ -0.44
TRAF4-209ENST00000473421 SLAMF7Q9NQ25 335 aa12.32□□□□□ -0.44
TRAF4-209ENST00000473421 AMACRQ9UHK6 382 aa12.32□□□□□ -0.44
TRAF4-209ENST00000473421 TCFL5Q9UL49 500 aa12.32□□□□□ -0.44
TRAF4-209ENST00000473421 ZNF451Q9Y4E5 1061 aa12.32□□□□□ -0.44
TRAF4-209ENST00000473421 FER1L5A0AVI2 2057 aa12.32□□□□□ -0.44
TRAF4-209ENST00000473421 ANKRD17O75179 2603 aaKnown RBP12.32□□□□□ -0.44
TRAF4-209ENST00000473421 F5H423 210 aaPredicted RBP12.31□□□□□ -0.44
TRAF4-209ENST00000473421 MEN1O00255 615 aa12.31□□□□□ -0.44
TRAF4-209ENST00000473421 GAPDHSO14556 408 aaPredicted RBP12.31□□□□□ -0.44
TRAF4-209ENST00000473421 BUD23O43709 281 aaKnown RBP12.31□□□□□ -0.44
TRAF4-209ENST00000473421 VEGFDO43915 354 aa12.31□□□□□ -0.44
TRAF4-209ENST00000473421 CPNE3O75131 537 aaKnown RBP12.31□□□□□ -0.44
TRAF4-209ENST00000473421 CYP1A2P05177 515 aa12.31□□□□□ -0.44
TRAF4-209ENST00000473421 RORAP35398 523 aa12.31□□□□□ -0.44
TRAF4-209ENST00000473421 HSD11B2P80365 405 aa12.31□□□□□ -0.44
TRAF4-209ENST00000473421 ATP1A4Q13733 1029 aa12.31□□□□□ -0.44
TRAF4-209ENST00000473421 PTPRCAPQ14761 206 aa12.31□□□□□ -0.44
TRAF4-209ENST00000473421 PTCHD3Q3KNS1 767 aa12.31□□□□□ -0.44
TRAF4-209ENST00000473421 CRB2Q5IJ48 1285 aa12.31□□□□□ -0.44
TRAF4-209ENST00000473421 DNTTIP2Q5QJE6 756 aaKnown RBP12.31□□□□□ -0.44
TRAF4-209ENST00000473421 NPNTQ6UXI9 565 aa12.31□□□□□ -0.44
TRAF4-209ENST00000473421 DSELQ8IZU8 1212 aa12.31□□□□□ -0.44
TRAF4-209ENST00000473421 LILRA3Q8N6C8 439 aaPredicted RBP12.31□□□□□ -0.44
TRAF4-209ENST00000473421 PLD5Q8N7P1 536 aa12.31□□□□□ -0.44
TRAF4-209ENST00000473421 BEND7Q8N7W2 519 aaPredicted RBP12.31□□□□□ -0.44
TRAF4-209ENST00000473421 KCTD6Q8NC69 237 aa12.31□□□□□ -0.44
TRAF4-209ENST00000473421 ANKRD20A12PQ8NF67 263 aa12.31□□□□□ -0.44
TRAF4-209ENST00000473421 PNPLA2Q96AD5 504 aa12.31□□□□□ -0.44
TRAF4-209ENST00000473421 HDAC11Q96DB2 347 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms