RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 WDR26Q9H7D7 661 aa9.04□□□□□ -0.96
SMC4-213ENST00000472282 SYNDIG1Q9H7V2 258 aa9.04□□□□□ -0.96
SMC4-213ENST00000472282 POLR1BQ9H9Y6 1135 aa9.04□□□□□ -0.96
SMC4-213ENST00000472282 RAD18Q9NS91 495 aa9.04□□□□□ -0.96
SMC4-213ENST00000472282 ZDHHC3Q9NYG2 299 aa9.04□□□□□ -0.96
SMC4-213ENST00000472282 IL17CQ9P0M4 197 aa9.04□□□□□ -0.96
SMC4-213ENST00000472282 NFKBIL1Q9UBC1 381 aaPredicted RBP9.04□□□□□ -0.96
SMC4-213ENST00000472282 PKP3Q9Y446 797 aa9.04□□□□□ -0.96
SMC4-213ENST00000472282 KCTD3Q9Y597 815 aa9.04□□□□□ -0.96
SMC4-213ENST00000472282 DSPP15924 2871 aaKnown RBP9.04□□□□□ -0.96
SMC4-213ENST00000472282 A0A1W2PNR3 127 aa9.03□□□□□ -0.96
SMC4-213ENST00000472282 RGSL1A5PLK6 1076 aa9.03□□□□□ -0.96
SMC4-213ENST00000472282 FADS2P1A8MWK0 482 aa9.03□□□□□ -0.96
SMC4-213ENST00000472282 GOLGA8MH3BSY2 632 aa9.03□□□□□ -0.96
SMC4-213ENST00000472282 CACNB4O00305 520 aaPredicted RBP9.03□□□□□ -0.96
SMC4-213ENST00000472282 NTN3O00634 580 aaPredicted RBP9.03□□□□□ -0.96
SMC4-213ENST00000472282 CDK2AP1O14519 115 aa9.03□□□□□ -0.96
SMC4-213ENST00000472282 INPP4BO15327 924 aa9.03□□□□□ -0.96
SMC4-213ENST00000472282 LDB2O43679 373 aa9.03□□□□□ -0.96
SMC4-213ENST00000472282 NOBOXO60393 691 aa9.03□□□□□ -0.96
SMC4-213ENST00000472282 CRTAMO95727 393 aa9.03□□□□□ -0.96
SMC4-213ENST00000472282 TNFP01375 233 aa9.03□□□□□ -0.96
SMC4-213ENST00000472282 PRB1P04280 392 aa9.03□□□□□ -0.96
SMC4-213ENST00000472282 HOXB4P17483 251 aaPredicted RBP9.03□□□□□ -0.96
SMC4-213ENST00000472282 HTR1BP28222 390 aa9.03□□□□□ -0.96
SMC4-213ENST00000472282 TEAD1P28347 426 aa9.03□□□□□ -0.96
SMC4-213ENST00000472282 TRIM23P36406 574 aa9.03□□□□□ -0.96
SMC4-213ENST00000472282 SPAM1P38567 509 aa9.03□□□□□ -0.96
SMC4-213ENST00000472282 BLKP51451 505 aa9.03□□□□□ -0.96
SMC4-213ENST00000472282 ZNF140P52738 457 aaPredicted RBP9.03□□□□□ -0.96
SMC4-213ENST00000472282 SESN2P58004 480 aaPredicted RBP9.03□□□□□ -0.96
SMC4-213ENST00000472282 CCL7P80098 99 aa9.03□□□□□ -0.96
SMC4-213ENST00000472282 TMPRSS15P98073 1019 aa9.03□□□□□ -0.96
SMC4-213ENST00000472282 CDK3Q00526 305 aa9.03□□□□□ -0.96
SMC4-213ENST00000472282 CDK16Q00536 496 aa9.03□□□□□ -0.96
SMC4-213ENST00000472282 TUBB2AQ13885 445 aa9.03□□□□□ -0.96
SMC4-213ENST00000472282 ELOCQ15369 112 aa9.03□□□□□ -0.96
SMC4-213ENST00000472282 CCDC38Q502W7 563 aa9.03□□□□□ -0.96
SMC4-213ENST00000472282 RNASEH2BQ5TBB1 312 aaKnown RBP9.03□□□□□ -0.96
SMC4-213ENST00000472282 LRRC69Q6ZNQ3 347 aa9.03□□□□□ -0.96
SMC4-213ENST00000472282 RBM44Q6ZP01 1051 aaKnown RBP9.03□□□□□ -0.96
SMC4-213ENST00000472282 TRIM74Q86UV6 250 aa9.03□□□□□ -0.96
SMC4-213ENST00000472282 PPIL6Q8IXY8 311 aa9.03□□□□□ -0.96
SMC4-213ENST00000472282 SDR16C5Q8N3Y7 309 aa9.03□□□□□ -0.96
SMC4-213ENST00000472282 TRAM1L1Q8N609 369 aa9.03□□□□□ -0.96
SMC4-213ENST00000472282 NAT8LQ8N9F0 302 aa9.03□□□□□ -0.96
SMC4-213ENST00000472282 GPR156Q8NFN8 814 aa9.03□□□□□ -0.96
SMC4-213ENST00000472282 OR4K2Q8NGD2 314 aa9.03□□□□□ -0.96
SMC4-213ENST00000472282 OR56A4Q8NGH8 313 aa9.03□□□□□ -0.96
SMC4-213ENST00000472282 DNAJC1Q96KC8 554 aaKnown RBP9.03□□□□□ -0.96
SMC4-213ENST00000472282 FCRL3Q96P31 734 aaPredicted RBP9.03□□□□□ -0.96
SMC4-213ENST00000472282 PLEKHG4BQ96PX9 1271 aa9.03□□□□□ -0.96
SMC4-213ENST00000472282 TUBB2BQ9BVA1 445 aa9.03□□□□□ -0.96
SMC4-213ENST00000472282 SPATA16Q9BXB7 569 aa9.03□□□□□ -0.96
SMC4-213ENST00000472282 TRIM31Q9BZY9 425 aa9.03□□□□□ -0.96
SMC4-213ENST00000472282 SUDS3Q9H7L9 328 aaPredicted RBP9.03□□□□□ -0.96
SMC4-213ENST00000472282 CYP4F12Q9HCS2 524 aa9.03□□□□□ -0.96
SMC4-213ENST00000472282 PHPT1Q9NRX4 125 aaPredicted RBP9.03□□□□□ -0.96
SMC4-213ENST00000472282 GPR34Q9UPC5 381 aa9.03□□□□□ -0.96
SMC4-213ENST00000472282 ST14Q9Y5Y6 855 aa9.03□□□□□ -0.96
SMC4-213ENST00000472282 DGKBQ9Y6T7 804 aa9.03□□□□□ -0.96
SMC4-213ENST00000472282 BAHCC1Q9P281 2608 aa9.02□□□□□ -0.96
SMC4-213ENST00000472282 ITPR1Q14643 2758 aa9.02□□□□□ -0.96
SMC4-213ENST00000472282 GLYATL1P3A0A0U1RQE8 302 aa9.02□□□□□ -0.97
SMC4-213ENST00000472282 PRSS38A1L453 326 aa9.02□□□□□ -0.97
SMC4-213ENST00000472282 HEATR9A2RTY3 570 aa9.02□□□□□ -0.97
SMC4-213ENST00000472282 EFCAB8A8MWE9 144 aa9.02□□□□□ -0.97
SMC4-213ENST00000472282 B4DGG1 531 aa9.02□□□□□ -0.97
SMC4-213ENST00000472282 AGRPO00253 132 aa9.02□□□□□ -0.97
SMC4-213ENST00000472282 CCL22O00626 93 aa9.02□□□□□ -0.97
SMC4-213ENST00000472282 GAPDHSO14556 408 aaPredicted RBP9.02□□□□□ -0.97
SMC4-213ENST00000472282 RRP8O43159 456 aaKnown RBP9.02□□□□□ -0.97
SMC4-213ENST00000472282 GPR39O43194 453 aa9.02□□□□□ -0.97
SMC4-213ENST00000472282 ZNF500O60304 480 aaPredicted RBP9.02□□□□□ -0.97
SMC4-213ENST00000472282 PPFIA2O75334 1257 aa9.02□□□□□ -0.97
SMC4-213ENST00000472282 AVILO75366 819 aa9.02□□□□□ -0.97
SMC4-213ENST00000472282 RPLP0P05388 317 aaKnown RBP9.02□□□□□ -0.97
SMC4-213ENST00000472282 PYGLP06737 847 aa9.02□□□□□ -0.97
SMC4-213ENST00000472282 MYCLP1P12525 358 aaPredicted RBP9.02□□□□□ -0.97
SMC4-213ENST00000472282 IVDP26440 423 aa9.02□□□□□ -0.97
SMC4-213ENST00000472282 MGAT1P26572 445 aa9.02□□□□□ -0.97
SMC4-213ENST00000472282 RPL21P46778 160 aaKnown RBP9.02□□□□□ -0.97
SMC4-213ENST00000472282 POLD2P49005 469 aa9.02□□□□□ -0.97
SMC4-213ENST00000472282 PCBP4P57723 403 aaKnown RBP9.02□□□□□ -0.97
SMC4-213ENST00000472282 CRADDP78560 199 aa9.02□□□□□ -0.97
SMC4-213ENST00000472282 SARNPP82979 210 aaKnown RBP9.02□□□□□ -0.97
SMC4-213ENST00000472282 PDE1BQ01064 536 aa9.02□□□□□ -0.97
SMC4-213ENST00000472282 TNP2Q05952 138 aa9.02□□□□□ -0.97
SMC4-213ENST00000472282 SPIDRQ14159 915 aa9.02□□□□□ -0.97
SMC4-213ENST00000472282 C8orf74Q6P047 294 aa9.02□□□□□ -0.97
SMC4-213ENST00000472282 LRRC8BQ6P9F7 803 aa9.02□□□□□ -0.97
SMC4-213ENST00000472282 OGFOD3Q6PK18 319 aa9.02□□□□□ -0.97
SMC4-213ENST00000472282 DOK6Q6PKX4 331 aa9.02□□□□□ -0.97
SMC4-213ENST00000472282 LVRNQ6Q4G3 990 aa9.02□□□□□ -0.97
SMC4-213ENST00000472282 PCSK4Q6UW60 755 aa9.02□□□□□ -0.97
SMC4-213ENST00000472282 FAM151BQ6UXP7 276 aa9.02□□□□□ -0.97
SMC4-213ENST00000472282 ADAMTSL4Q6UY14 1074 aa9.02□□□□□ -0.97
SMC4-213ENST00000472282 MICALCLQ6ZW33 695 aa9.02□□□□□ -0.97
SMC4-213ENST00000472282 CHSY3Q70JA7 882 aa9.02□□□□□ -0.97
SMC4-213ENST00000472282 TMPRSS9Q7Z410 1059 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms