RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 C15orf59Q2T9L4 293 aaPredicted RBP8.78□□□□□ -1
SYNGAP1-205ENST00000470232 TUBB8Q3ZCM7 444 aa8.78□□□□□ -1
SYNGAP1-205ENST00000470232 FAM153CQ494X1 144 aa8.78□□□□□ -1
SYNGAP1-205ENST00000470232 CCDC14Q49A88 953 aa8.78□□□□□ -1
SYNGAP1-205ENST00000470232 TMCO4Q5TGY1 634 aa8.78□□□□□ -1
SYNGAP1-205ENST00000470232 CACHD1Q5VU97 1274 aa8.78□□□□□ -1
SYNGAP1-205ENST00000470232 LYPLAL1Q5VWZ2 237 aa8.78□□□□□ -1
SYNGAP1-205ENST00000470232 CPZQ66K79 652 aa8.78□□□□□ -1
SYNGAP1-205ENST00000470232 TRNP1Q6NT89 227 aa8.78□□□□□ -1
SYNGAP1-205ENST00000470232 LRIG3Q6UXM1 1119 aa8.78□□□□□ -1
SYNGAP1-205ENST00000470232 ADAMTSL4Q6UY14 1074 aa8.78□□□□□ -1
SYNGAP1-205ENST00000470232 MARK2Q7KZI7 788 aaKnown RBP8.78□□□□□ -1
SYNGAP1-205ENST00000470232 CHST15Q7LFX5 561 aaPredicted RBP8.78□□□□□ -1
SYNGAP1-205ENST00000470232 MAATS1Q7Z4T9 603 aa8.78□□□□□ -1
SYNGAP1-205ENST00000470232 NLRP8Q86W28 1048 aa8.78□□□□□ -1
SYNGAP1-205ENST00000470232 FAM71AQ8IYT1 594 aa8.78□□□□□ -1
SYNGAP1-205ENST00000470232 CBARPQ8N350 705 aaPredicted RBP8.78□□□□□ -1
SYNGAP1-205ENST00000470232 CISD2Q8N5K1 135 aaKnown RBP8.78□□□□□ -1
SYNGAP1-205ENST00000470232 EMC1Q8N766 993 aa8.78□□□□□ -1
SYNGAP1-205ENST00000470232 RBMXL3Q8N7X1 1067 aaKnown RBP8.78□□□□□ -1
SYNGAP1-205ENST00000470232 TMEM102Q8N9M5 508 aaPredicted RBP8.78□□□□□ -1
SYNGAP1-205ENST00000470232 FDCSPQ8NFU4 85 aa8.78□□□□□ -1
SYNGAP1-205ENST00000470232 ACTRT1Q8TDG2 376 aa8.78□□□□□ -1
SYNGAP1-205ENST00000470232 FAM172AQ8WUF8 416 aa8.78□□□□□ -1
SYNGAP1-205ENST00000470232 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.78□□□□□ -1
SYNGAP1-205ENST00000470232 AP2M1Q96CW1 435 aa8.78□□□□□ -1
SYNGAP1-205ENST00000470232 CALR3Q96L12 384 aaKnown RBP8.78□□□□□ -1
SYNGAP1-205ENST00000470232 TGM7Q96PF1 710 aa8.78□□□□□ -1
SYNGAP1-205ENST00000470232 TBC1D10AQ9BXI6 508 aa8.78□□□□□ -1
SYNGAP1-205ENST00000470232 PDFQ9HBH1 243 aa8.78□□□□□ -1
SYNGAP1-205ENST00000470232 CPNE7Q9UBL6 633 aa8.78□□□□□ -1
SYNGAP1-205ENST00000470232 FAM153AQ9UHL3 310 aa8.78□□□□□ -1
SYNGAP1-205ENST00000470232 ITGB1BP2Q9UKP3 347 aa8.78□□□□□ -1
SYNGAP1-205ENST00000470232 RARRES3Q9UL19 164 aa8.78□□□□□ -1
SYNGAP1-205ENST00000470232 NEU3Q9UQ49 428 aa8.78□□□□□ -1
SYNGAP1-205ENST00000470232 GOLGA6L10A6NI86 522 aa8.77□□□□□ -1.01
SYNGAP1-205ENST00000470232 PRSS44E7EML9 344 aa8.77□□□□□ -1.01
SYNGAP1-205ENST00000470232 EIF3HO15372 352 aaKnown RBP eCLIP8.77□□□□□ -1.01
SYNGAP1-205ENST00000470232 LRRTM2O43300 516 aa8.77□□□□□ -1.01
SYNGAP1-205ENST00000470232 SNX2O60749 519 aa8.77□□□□□ -1.01
SYNGAP1-205ENST00000470232 SOCS5O75159 536 aa8.77□□□□□ -1.01
SYNGAP1-205ENST00000470232 TMEM63AO94886 807 aa8.77□□□□□ -1.01
SYNGAP1-205ENST00000470232 CPP00450 1065 aa8.77□□□□□ -1.01
SYNGAP1-205ENST00000470232 VIPP01282 170 aa8.77□□□□□ -1.01
SYNGAP1-205ENST00000470232 KLK3P07288 261 aaPredicted RBP8.77□□□□□ -1.01
SYNGAP1-205ENST00000470232 TMEM253P0C7T8 217 aa8.77□□□□□ -1.01
SYNGAP1-205ENST00000470232 F3P13726 295 aa8.77□□□□□ -1.01
SYNGAP1-205ENST00000470232 DESP17661 470 aa8.77□□□□□ -1.01
SYNGAP1-205ENST00000470232 TNFAIP3P21580 790 aa8.77□□□□□ -1.01
SYNGAP1-205ENST00000470232 HSPA9P38646 679 aaKnown RBP8.77□□□□□ -1.01
SYNGAP1-205ENST00000470232 PAPOLAP51003 745 aaKnown RBP8.77□□□□□ -1.01
SYNGAP1-205ENST00000470232 AIF1P55008 147 aa8.77□□□□□ -1.01
SYNGAP1-205ENST00000470232 GFERP55789 205 aa8.77□□□□□ -1.01
SYNGAP1-205ENST00000470232 ACY1Q03154 408 aa8.77□□□□□ -1.01
SYNGAP1-205ENST00000470232 PLEKHN1Q494U1 663 aaPredicted RBP8.77□□□□□ -1.01
SYNGAP1-205ENST00000470232 C2CD6Q53TS8 623 aa8.77□□□□□ -1.01
SYNGAP1-205ENST00000470232 DNAJC21Q5F1R6 531 aaKnown RBP8.77□□□□□ -1.01
SYNGAP1-205ENST00000470232 SCYL2Q6P3W7 929 aa8.77□□□□□ -1.01
SYNGAP1-205ENST00000470232 Q6ZVL8 140 aa8.77□□□□□ -1.01
SYNGAP1-205ENST00000470232 USP45Q70EL2 814 aa8.77□□□□□ -1.01
SYNGAP1-205ENST00000470232 GDF7Q7Z4P5 450 aa8.77□□□□□ -1.01
SYNGAP1-205ENST00000470232 HSD11B1LQ7Z5J1 315 aa8.77□□□□□ -1.01
SYNGAP1-205ENST00000470232 TRIM48Q8IWZ4 208 aa8.77□□□□□ -1.01
SYNGAP1-205ENST00000470232 ARFGAP1Q8N6T3 406 aa8.77□□□□□ -1.01
SYNGAP1-205ENST00000470232 CCDC185Q8N715 623 aa8.77□□□□□ -1.01
SYNGAP1-205ENST00000470232 LRRC57Q8N9N7 239 aa8.77□□□□□ -1.01
SYNGAP1-205ENST00000470232 EIF1ADQ8N9N8 165 aaKnown RBP8.77□□□□□ -1.01
SYNGAP1-205ENST00000470232 GLIS1Q8NBF1 620 aa8.77□□□□□ -1.01
SYNGAP1-205ENST00000470232 SIDT2Q8NBJ9 832 aaKnown RBP8.77□□□□□ -1.01
SYNGAP1-205ENST00000470232 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.77□□□□□ -1.01
SYNGAP1-205ENST00000470232 ST6GALNAC3Q8NDV1 305 aa8.77□□□□□ -1.01
SYNGAP1-205ENST00000470232 EXD1Q8NHP7 514 aa8.77□□□□□ -1.01
SYNGAP1-205ENST00000470232 CPA5Q8WXQ8 436 aa8.77□□□□□ -1.01
SYNGAP1-205ENST00000470232 CENPIQ92674 756 aaPredicted RBP8.77□□□□□ -1.01
SYNGAP1-205ENST00000470232 LRRC45Q96CN5 670 aa8.77□□□□□ -1.01
SYNGAP1-205ENST00000470232 RNF31Q96EP0 1072 aa8.77□□□□□ -1.01
SYNGAP1-205ENST00000470232 SMAD5Q99717 465 aaKnown RBP8.77□□□□□ -1.01
SYNGAP1-205ENST00000470232 STK33Q9BYT3 514 aa8.77□□□□□ -1.01
SYNGAP1-205ENST00000470232 MAGEB5Q9BZ81 275 aa8.77□□□□□ -1.01
SYNGAP1-205ENST00000470232 ILKAPQ9H0C8 392 aaPredicted RBP8.77□□□□□ -1.01
SYNGAP1-205ENST00000470232 ISCUQ9H1K1 167 aa8.77□□□□□ -1.01
SYNGAP1-205ENST00000470232 RMI1Q9H9A7 625 aa8.77□□□□□ -1.01
SYNGAP1-205ENST00000470232 SP110Q9HB58 689 aa8.77□□□□□ -1.01
SYNGAP1-205ENST00000470232 SEPT11Q9NVA2 429 aaKnown RBP8.77□□□□□ -1.01
SYNGAP1-205ENST00000470232 TBC1D29Q9UFV1 150 aa8.77□□□□□ -1.01
SYNGAP1-205ENST00000470232 B3GNT3Q9Y2A9 372 aa8.77□□□□□ -1.01
SYNGAP1-205ENST00000470232 HIVEP1P15822 2718 aa8.76□□□□□ -1.01
SYNGAP1-205ENST00000470232 CSMD2Q7Z408 3487 aa8.76□□□□□ -1.01
SYNGAP1-205ENST00000470232 DIDO1Q9BTC0 2240 aaKnown RBP8.76□□□□□ -1.01
SYNGAP1-205ENST00000470232 NF1P21359 2839 aa8.76□□□□□ -1.01
SYNGAP1-205ENST00000470232 A6NL46 340 aa8.76□□□□□ -1.01
SYNGAP1-205ENST00000470232 C2CD4BA6NLJ0 364 aa8.76□□□□□ -1.01
SYNGAP1-205ENST00000470232 HMGB1P1B2RPK0 211 aaPredicted RBP8.76□□□□□ -1.01
SYNGAP1-205ENST00000470232 F8VZ95 297 aa8.76□□□□□ -1.01
SYNGAP1-205ENST00000470232 HTRA2O43464 458 aaPredicted RBP8.76□□□□□ -1.01
SYNGAP1-205ENST00000470232 EML2O95834 649 aa8.76□□□□□ -1.01
SYNGAP1-205ENST00000470232 ALPPP05187 535 aa8.76□□□□□ -1.01
SYNGAP1-205ENST00000470232 KRT3P12035 628 aa8.76□□□□□ -1.01
SYNGAP1-205ENST00000470232 TYRP1P17643 537 aa8.76□□□□□ -1.01
SYNGAP1-205ENST00000470232 XRCC1P18887 633 aaPredicted RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms