RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 FBXO39Q8N4B4 442 aa4.96□□□□□ -1.62
LSM5-209ENST00000468872 GCSAMQ8N6F7 178 aa4.96□□□□□ -1.62
LSM5-209ENST00000468872 TC2NQ8N9U0 490 aa4.96□□□□□ -1.62
LSM5-209ENST00000468872 Q8NFD4 153 aa4.96□□□□□ -1.62
LSM5-209ENST00000468872 OR6J1Q8NGC5 347 aa4.96□□□□□ -1.62
LSM5-209ENST00000468872 OR10S1Q8NGN2 331 aa4.96□□□□□ -1.62
LSM5-209ENST00000468872 THAP6Q8TBB0 222 aa4.96□□□□□ -1.62
LSM5-209ENST00000468872 TBC1D16Q8TBP0 767 aa4.96□□□□□ -1.62
LSM5-209ENST00000468872 TMED6Q8WW62 240 aa4.96□□□□□ -1.62
LSM5-209ENST00000468872 TANKQ92844 425 aa4.96□□□□□ -1.62
LSM5-209ENST00000468872 VPS33AQ96AX1 596 aa4.96□□□□□ -1.62
LSM5-209ENST00000468872 FAM84BQ96KN1 310 aaPredicted RBP4.96□□□□□ -1.62
LSM5-209ENST00000468872 OCIAD1Q9NX40 245 aa4.96□□□□□ -1.62
LSM5-209ENST00000468872 CCL27Q9Y4X3 112 aa4.96□□□□□ -1.62
LSM5-209ENST00000468872 WDR62O43379 1518 aa4.96□□□□□ -1.62
LSM5-209ENST00000468872 PTPRCP08575 1304 aa4.96□□□□□ -1.62
LSM5-209ENST00000468872 A0A1W2PRQ8 180 aa4.95□□□□□ -1.62
LSM5-209ENST00000468872 SRRM3A6NNA2 597 aaPredicted RBP4.95□□□□□ -1.62
LSM5-209ENST00000468872 SPRY1O43609 319 aaPredicted RBP4.95□□□□□ -1.62
LSM5-209ENST00000468872 C22orf31O95567 290 aa4.95□□□□□ -1.62
LSM5-209ENST00000468872 PRSS2P07478 247 aa4.95□□□□□ -1.62
LSM5-209ENST00000468872 ACAA1P09110 424 aaPredicted RBP4.95□□□□□ -1.62
LSM5-209ENST00000468872 LINC00271P0C7V0 271 aa4.95□□□□□ -1.62
LSM5-209ENST00000468872 GLULP15104 373 aa4.95□□□□□ -1.62
LSM5-209ENST00000468872 PDE1BQ01064 536 aa4.95□□□□□ -1.62
LSM5-209ENST00000468872 TRAF2Q12933 501 aa4.95□□□□□ -1.62
LSM5-209ENST00000468872 KEAP1Q14145 624 aa4.95□□□□□ -1.62
LSM5-209ENST00000468872 PSMD6Q15008 389 aa4.95□□□□□ -1.62
LSM5-209ENST00000468872 SNAPC1Q16533 368 aa4.95□□□□□ -1.62
LSM5-209ENST00000468872 CALCRLQ16602 461 aa4.95□□□□□ -1.62
LSM5-209ENST00000468872 LETM2Q2VYF4 491 aa4.95□□□□□ -1.62
LSM5-209ENST00000468872 CBWD6Q4V339 395 aa4.95□□□□□ -1.62
LSM5-209ENST00000468872 CBWD3Q5JTY5 395 aa4.95□□□□□ -1.62
LSM5-209ENST00000468872 ZDHHC20Q5W0Z9 365 aa4.95□□□□□ -1.62
LSM5-209ENST00000468872 CAPRIN2Q6IMN6 1127 aaKnown RBP4.95□□□□□ -1.62
LSM5-209ENST00000468872 RHBDF2Q6PJF5 856 aa4.95□□□□□ -1.62
LSM5-209ENST00000468872 Q75L30 129 aa4.95□□□□□ -1.62
LSM5-209ENST00000468872 CFAP61Q8NHU2 1237 aa4.95□□□□□ -1.62
LSM5-209ENST00000468872 ELP5Q8TE02 316 aa4.95□□□□□ -1.62
LSM5-209ENST00000468872 SLC38A5Q8WUX1 472 aa4.95□□□□□ -1.62
LSM5-209ENST00000468872 NUDCD2Q8WVJ2 157 aa4.95□□□□□ -1.62
LSM5-209ENST00000468872 MTBPQ96DY7 904 aa4.95□□□□□ -1.62
LSM5-209ENST00000468872 LINC00615Q96LM1 132 aaPredicted RBP4.95□□□□□ -1.62
LSM5-209ENST00000468872 ZNF830Q96NB3 372 aaPredicted RBP4.95□□□□□ -1.62
LSM5-209ENST00000468872 QRFPRQ96P65 431 aa4.95□□□□□ -1.62
LSM5-209ENST00000468872 OR1F2PQ96R84 312 aa4.95□□□□□ -1.62
LSM5-209ENST00000468872 SLC22A12Q96S37 553 aa4.95□□□□□ -1.62
LSM5-209ENST00000468872 GPR88Q9GZN0 384 aa4.95□□□□□ -1.62
LSM5-209ENST00000468872 ERVMER34-1Q9H9K5 563 aa4.95□□□□□ -1.62
LSM5-209ENST00000468872 OLAHQ9NV23 265 aa4.95□□□□□ -1.62
LSM5-209ENST00000468872 HAO2Q9NYQ3 351 aa4.95□□□□□ -1.62
LSM5-209ENST00000468872 RCC2Q9P258 522 aaKnown RBP4.95□□□□□ -1.62
LSM5-209ENST00000468872 WNT16Q9UBV4 365 aa4.95□□□□□ -1.62
LSM5-209ENST00000468872 NFS1Q9Y697 457 aa4.95□□□□□ -1.62
LSM5-209ENST00000468872 ASTN2O75129 1339 aaPredicted RBP4.95□□□□□ -1.62
LSM5-209ENST00000468872 PDS5AQ29RF7 1337 aaKnown RBP4.95□□□□□ -1.62
LSM5-209ENST00000468872 ZNF541Q9H0D2 1346 aa4.95□□□□□ -1.62
LSM5-209ENST00000468872 MRC2Q9UBG0 1479 aa4.94□□□□□ -1.62
LSM5-209ENST00000468872 IGLV5-37A0A075B6J1 123 aa4.94□□□□□ -1.62
LSM5-209ENST00000468872 H0YIN7 160 aa4.94□□□□□ -1.62
LSM5-209ENST00000468872 PLK4O00444 970 aa4.94□□□□□ -1.62
LSM5-209ENST00000468872 ZBTB43O43298 467 aa4.94□□□□□ -1.62
LSM5-209ENST00000468872 TADA2AO75478 443 aa4.94□□□□□ -1.62
LSM5-209ENST00000468872 HSPA4LO95757 839 aa4.94□□□□□ -1.62
LSM5-209ENST00000468872 GJA1P17302 382 aa4.94□□□□□ -1.62
LSM5-209ENST00000468872 DNASE1P24855 282 aa4.94□□□□□ -1.62
LSM5-209ENST00000468872 MC5RP33032 325 aa4.94□□□□□ -1.62
LSM5-209ENST00000468872 MATR3P43243 847 aaKnown RBP eCLIP4.94□□□□□ -1.62
LSM5-209ENST00000468872 COG7P83436 770 aa4.94□□□□□ -1.62
LSM5-209ENST00000468872 RUNX1T1Q06455 604 aa4.94□□□□□ -1.62
LSM5-209ENST00000468872 HLFQ16534 295 aa4.94□□□□□ -1.62
LSM5-209ENST00000468872 RAB6CQ53S08 254 aa4.94□□□□□ -1.62
LSM5-209ENST00000468872 ALS2CLQ60I27 953 aa4.94□□□□□ -1.62
LSM5-209ENST00000468872 KRT80Q6KB66 452 aa4.94□□□□□ -1.62
LSM5-209ENST00000468872 MAP7D3Q8IWC1 876 aa4.94□□□□□ -1.62
LSM5-209ENST00000468872 ZNF595Q8IYB9 648 aa4.94□□□□□ -1.62
LSM5-209ENST00000468872 C1orf87Q8N0U7 546 aa4.94□□□□□ -1.62
LSM5-209ENST00000468872 SLC5A8Q8N695 610 aa4.94□□□□□ -1.62
LSM5-209ENST00000468872 NKAIN3Q8N8D7 197 aa4.94□□□□□ -1.62
LSM5-209ENST00000468872 XXYLT1Q8NBI6 393 aa4.94□□□□□ -1.62
LSM5-209ENST00000468872 WDR20Q8TBZ3 569 aa4.94□□□□□ -1.62
LSM5-209ENST00000468872 TEKT4Q8WW24 435 aa4.94□□□□□ -1.62
LSM5-209ENST00000468872 DNAAF4Q8WXU2 420 aa4.94□□□□□ -1.62
LSM5-209ENST00000468872 ABTB1Q969K4 478 aaPredicted RBP4.94□□□□□ -1.62
LSM5-209ENST00000468872 RMDN1Q96DB5 314 aa4.94□□□□□ -1.62
LSM5-209ENST00000468872 ERLEC1Q96DZ1 483 aa4.94□□□□□ -1.62
LSM5-209ENST00000468872 PHF21BQ96EK2 531 aa4.94□□□□□ -1.62
LSM5-209ENST00000468872 RAB6CQ9H0N0 254 aa4.94□□□□□ -1.62
LSM5-209ENST00000468872 IL25Q9H293 177 aa4.94□□□□□ -1.62
LSM5-209ENST00000468872 ST6GALNAC4Q9H4F1 302 aa4.94□□□□□ -1.62
LSM5-209ENST00000468872 ZNF224Q9NZL3 707 aa4.94□□□□□ -1.62
LSM5-209ENST00000468872 KLHL9Q9P2J3 617 aa4.94□□□□□ -1.62
LSM5-209ENST00000468872 SIX4Q9UIU6 781 aa4.94□□□□□ -1.62
LSM5-209ENST00000468872 OSGIN1Q9UJX0 560 aa4.94□□□□□ -1.62
LSM5-209ENST00000468872 KIF13AQ9H1H9 1805 aa4.94□□□□□ -1.62
LSM5-209ENST00000468872 OR2M5A3KFT3 312 aa4.93□□□□□ -1.62
LSM5-209ENST00000468872 ACOT8O14734 319 aa4.93□□□□□ -1.62
LSM5-209ENST00000468872 TO15178 435 aa4.93□□□□□ -1.62
LSM5-209ENST00000468872 TOMM70O94826 608 aa4.93□□□□□ -1.62
LSM5-209ENST00000468872 SLCO2B1O94956 709 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms