RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 COQ10AQ96MF6 247 aa18.39■□□□□ 0.53
CAPN3-209ENST00000466222 BIRC8Q96P09 236 aa18.39■□□□□ 0.53
CAPN3-209ENST00000466222 NECAB3Q96P71 396 aaPredicted RBP18.39■□□□□ 0.53
CAPN3-209ENST00000466222 SPATA16Q9BXB7 569 aa18.39■□□□□ 0.53
CAPN3-209ENST00000466222 UNKQ9C0B0 810 aaKnown RBP18.39■□□□□ 0.53
CAPN3-209ENST00000466222 NDE1Q9NXR1 346 aa18.39■□□□□ 0.53
CAPN3-209ENST00000466222 PKD2L2Q9NZM6 624 aa18.39■□□□□ 0.53
CAPN3-209ENST00000466222 MBD1Q9UIS9 605 aaPredicted RBP18.39■□□□□ 0.53
CAPN3-209ENST00000466222 MMP17Q9ULZ9 603 aa18.39■□□□□ 0.53
CAPN3-209ENST00000466222 DNAH14Q0VDD8 3507 aa18.39■□□□□ 0.53
CAPN3-209ENST00000466222 FAM170BA6NMN3 283 aa18.39■□□□□ 0.53
CAPN3-209ENST00000466222 IQCF5A8MTL0 148 aa18.39■□□□□ 0.53
CAPN3-209ENST00000466222 FADS2P1A8MWK0 482 aa18.39■□□□□ 0.53
CAPN3-209ENST00000466222 K7ESM1 405 aa18.39■□□□□ 0.53
CAPN3-209ENST00000466222 CCNT2O60583 730 aaKnown RBP18.39■□□□□ 0.53
CAPN3-209ENST00000466222 MTX2O75431 263 aa18.39■□□□□ 0.53
CAPN3-209ENST00000466222 DNTTP04053 509 aa18.39■□□□□ 0.53
CAPN3-209ENST00000466222 ELP6Q0PNE2 266 aa18.39■□□□□ 0.53
CAPN3-209ENST00000466222 HECTD2Q5U5R9 776 aa18.39■□□□□ 0.53
CAPN3-209ENST00000466222 SEL1L3Q68CR1 1132 aa18.39■□□□□ 0.53
CAPN3-209ENST00000466222 TRIM67Q6ZTA4 783 aa18.39■□□□□ 0.53
CAPN3-209ENST00000466222 PLD6Q8N2A8 252 aaKnown RBP18.39■□□□□ 0.53
CAPN3-209ENST00000466222 FBXO27Q8NI29 283 aa18.39■□□□□ 0.53
CAPN3-209ENST00000466222 DTX3LQ8TDB6 740 aa18.39■□□□□ 0.53
CAPN3-209ENST00000466222 FUBP1Q96AE4 644 aaKnown RBP18.39■□□□□ 0.53
CAPN3-209ENST00000466222 SIPA1Q96FS4 1042 aa18.39■□□□□ 0.53
CAPN3-209ENST00000466222 OSBPL6Q9BZF3 934 aa18.39■□□□□ 0.53
CAPN3-209ENST00000466222 GALPQ9UBC7 116 aa18.39■□□□□ 0.53
CAPN3-209ENST00000466222 WNT16Q9UBV4 365 aa18.39■□□□□ 0.53
CAPN3-209ENST00000466222 MED16Q9Y2X0 877 aa18.39■□□□□ 0.53
CAPN3-209ENST00000466222 IGLON5A6NGN9 336 aa18.38■□□□□ 0.53
CAPN3-209ENST00000466222 WNT9AO14904 365 aa18.38■□□□□ 0.53
CAPN3-209ENST00000466222 C2P06681 752 aa18.38■□□□□ 0.53
CAPN3-209ENST00000466222 ITGALP20701 1170 aa18.38■□□□□ 0.53
CAPN3-209ENST00000466222 PRKCQQ04759 706 aa18.38■□□□□ 0.53
CAPN3-209ENST00000466222 EOGTQ5NDL2 527 aa18.38■□□□□ 0.53
CAPN3-209ENST00000466222 ZNF648Q5T619 568 aaPredicted RBP18.38■□□□□ 0.53
CAPN3-209ENST00000466222 CLEC14AQ86T13 490 aa18.38■□□□□ 0.53
CAPN3-209ENST00000466222 RDH11Q8TC12 318 aa18.38■□□□□ 0.53
CAPN3-209ENST00000466222 PLEKHG4BQ96PX9 1271 aa18.38■□□□□ 0.53
CAPN3-209ENST00000466222 LTB4R2Q9NPC1 389 aa18.38■□□□□ 0.53
CAPN3-209ENST00000466222 CRLS1Q9UJA2 301 aa18.38■□□□□ 0.53
CAPN3-209ENST00000466222 ANKRD6Q9Y2G4 727 aa18.38■□□□□ 0.53
CAPN3-209ENST00000466222 PRSS21Q9Y6M0 314 aa18.38■□□□□ 0.53
CAPN3-209ENST00000466222 ANKRD36A6QL64 1941 aa18.38■□□□□ 0.53
CAPN3-209ENST00000466222 A0A088AWK7 358 aa18.37■□□□□ 0.53
CAPN3-209ENST00000466222 A0A096LPK6 155 aa18.37■□□□□ 0.53
CAPN3-209ENST00000466222 TRBV5-4A0A0C4DH59 114 aa18.37■□□□□ 0.53
CAPN3-209ENST00000466222 KANSL1LA0AUZ9 987 aa18.37■□□□□ 0.53
CAPN3-209ENST00000466222 ZNF195O14628 629 aa18.37■□□□□ 0.53
CAPN3-209ENST00000466222 PCDH8O95206 1070 aa18.37■□□□□ 0.53
CAPN3-209ENST00000466222 GABRG2P18507 467 aa18.37■□□□□ 0.53
CAPN3-209ENST00000466222 ACRV1P26436 265 aa18.37■□□□□ 0.53
CAPN3-209ENST00000466222 TTPAP49638 278 aa18.37■□□□□ 0.53
CAPN3-209ENST00000466222 CSRP3P50461 194 aa18.37■□□□□ 0.53
CAPN3-209ENST00000466222 STARD6P59095 220 aa18.37■□□□□ 0.53
CAPN3-209ENST00000466222 BTKQ06187 659 aa18.37■□□□□ 0.53
CAPN3-209ENST00000466222 TMEM52BQ4KMG9 183 aa18.37■□□□□ 0.53
CAPN3-209ENST00000466222 CTSL3PQ5NE16 218 aa18.37■□□□□ 0.53
CAPN3-209ENST00000466222 HENMT1Q5T8I9 393 aaKnown RBP18.37■□□□□ 0.53
CAPN3-209ENST00000466222 KIAA1324Q6UXG2 1013 aaKnown RBP18.37■□□□□ 0.53
CAPN3-209ENST00000466222 RAPH1Q70E73 1250 aa18.37■□□□□ 0.53
CAPN3-209ENST00000466222 GALNT7Q86SF2 657 aa18.37■□□□□ 0.53
CAPN3-209ENST00000466222 OR14C36Q8NHC7 312 aa18.37■□□□□ 0.53
CAPN3-209ENST00000466222 HMGB4Q8WW32 186 aa18.37■□□□□ 0.53
CAPN3-209ENST00000466222 KLK6Q92876 244 aa18.37■□□□□ 0.53
CAPN3-209ENST00000466222 NR1H4Q96RI1 486 aaPredicted RBP18.37■□□□□ 0.53
CAPN3-209ENST00000466222 SCOCQ9UIL1 159 aa18.37■□□□□ 0.53
CAPN3-209ENST00000466222 VWA7Q9Y334 891 aa18.37■□□□□ 0.53
CAPN3-209ENST00000466222 ATG2BQ96BY7 2078 aa18.37■□□□□ 0.53
CAPN3-209ENST00000466222 MAGEA13PA6NCF6 341 aa18.37■□□□□ 0.53
CAPN3-209ENST00000466222 AGAP14A8MT82 685 aa18.37■□□□□ 0.53
CAPN3-209ENST00000466222 H0Y858 1186 aa18.37■□□□□ 0.53
CAPN3-209ENST00000466222 LZTS3O60299 673 aaPredicted RBP18.37■□□□□ 0.53
CAPN3-209ENST00000466222 LINGO3P0C6S8 592 aa18.37■□□□□ 0.53
CAPN3-209ENST00000466222 SLC35E2BP0CK96 405 aa18.37■□□□□ 0.53
CAPN3-209ENST00000466222 NFKBIAP25963 317 aa18.37■□□□□ 0.53
CAPN3-209ENST00000466222 CLCN5P51795 746 aa18.37■□□□□ 0.53
CAPN3-209ENST00000466222 B4GALNT1Q00973 533 aa18.37■□□□□ 0.53
CAPN3-209ENST00000466222 ITGA9Q13797 1035 aa18.37■□□□□ 0.53
CAPN3-209ENST00000466222 TMEM207Q6UWW9 146 aa18.37■□□□□ 0.53
CAPN3-209ENST00000466222 MAVSQ7Z434 540 aa18.37■□□□□ 0.53
CAPN3-209ENST00000466222 NXPE1Q8N323 547 aa18.37■□□□□ 0.53
CAPN3-209ENST00000466222 GABPB2Q8TAK5 448 aaPredicted RBP18.37■□□□□ 0.53
CAPN3-209ENST00000466222 ACTRT2Q8TDY3 377 aa18.37■□□□□ 0.53
CAPN3-209ENST00000466222 AP2M1Q96CW1 435 aa18.37■□□□□ 0.53
CAPN3-209ENST00000466222 DTD2Q96FN9 168 aa18.37■□□□□ 0.53
CAPN3-209ENST00000466222 CDH19Q9H159 772 aa18.37■□□□□ 0.53
CAPN3-209ENST00000466222 INTS10Q9NVR2 710 aaKnown RBP18.37■□□□□ 0.53
CAPN3-209ENST00000466222 PNPOQ9NVS9 261 aa18.37■□□□□ 0.53
CAPN3-209ENST00000466222 STK25O00506 426 aa18.36■□□□□ 0.53
CAPN3-209ENST00000466222 SETMARQ53H47 684 aaPredicted RBP18.36■□□□□ 0.53
CAPN3-209ENST00000466222 TMEM154Q6P9G4 183 aa18.36■□□□□ 0.53
CAPN3-209ENST00000466222 PGM2L1Q6PCE3 622 aa18.36■□□□□ 0.53
CAPN3-209ENST00000466222 CXorf40AQ8TE69 158 aa18.36■□□□□ 0.53
CAPN3-209ENST00000466222 RAB7BQ96AH8 199 aa18.36■□□□□ 0.53
CAPN3-209ENST00000466222 ASB2Q96Q27 587 aa18.36■□□□□ 0.53
CAPN3-209ENST00000466222 TCF12Q99081 682 aa18.36■□□□□ 0.53
CAPN3-209ENST00000466222 SLC30A3Q99726 388 aa18.36■□□□□ 0.53
CAPN3-209ENST00000466222 C19orf43Q9BQ61 176 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms