RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 ARHGEF7Q14155 803 aa16.14■□□□□ 0.17
SLX4-202ENST00000466154 PTGR1Q14914 329 aa16.14■□□□□ 0.17
SLX4-202ENST00000466154 SLC44A4Q53GD3 710 aa16.14■□□□□ 0.17
SLX4-202ENST00000466154 LHX8Q68G74 356 aa16.14■□□□□ 0.17
SLX4-202ENST00000466154 NANOGP8Q6NSW7 305 aa16.14■□□□□ 0.17
SLX4-202ENST00000466154 DET1Q7L5Y6 550 aa16.14■□□□□ 0.17
SLX4-202ENST00000466154 GOLGA7Q7Z5G4 137 aa16.14■□□□□ 0.17
SLX4-202ENST00000466154 CHERPQ8IWX8 916 aaKnown RBP16.14■□□□□ 0.17
SLX4-202ENST00000466154 KIAA2013Q8IYS2 634 aa16.14■□□□□ 0.17
SLX4-202ENST00000466154 SFRP1Q8N474 314 aa16.14■□□□□ 0.17
SLX4-202ENST00000466154 TMEM125Q96AQ2 219 aa16.14■□□□□ 0.17
SLX4-202ENST00000466154 MYO19Q96H55 970 aa16.14■□□□□ 0.17
SLX4-202ENST00000466154 HIC2Q96JB3 615 aa16.14■□□□□ 0.17
SLX4-202ENST00000466154 ZFRQ96KR1 1074 aaKnown RBP16.14■□□□□ 0.17
SLX4-202ENST00000466154 NANOGQ9H9S0 305 aa16.14■□□□□ 0.17
SLX4-202ENST00000466154 SMOXQ9NWM0 555 aa16.14■□□□□ 0.17
SLX4-202ENST00000466154 CPQQ9Y646 472 aa16.14■□□□□ 0.17
SLX4-202ENST00000466154 PRSS21Q9Y6M0 314 aa16.14■□□□□ 0.17
SLX4-202ENST00000466154 HOXD10P28358 340 aa16.13■□□□□ 0.17
SLX4-202ENST00000466154 YAP1P46937 504 aaKnown RBP16.13■□□□□ 0.17
SLX4-202ENST00000466154 ABRAXAS2Q15018 415 aa16.13■□□□□ 0.17
SLX4-202ENST00000466154 AARS2Q5JTZ9 985 aaKnown RBP16.13■□□□□ 0.17
SLX4-202ENST00000466154 MINDY1Q8N5J2 469 aa16.13■□□□□ 0.17
SLX4-202ENST00000466154 FIG4Q92562 907 aa16.13■□□□□ 0.17
SLX4-202ENST00000466154 SMG9Q9H0W8 520 aaKnown RBP16.13■□□□□ 0.17
SLX4-202ENST00000466154 CCM2LQ9NUG4 571 aaPredicted RBP16.13■□□□□ 0.17
SLX4-202ENST00000466154 LEF1Q9UJU2 399 aaPredicted RBP16.13■□□□□ 0.17
SLX4-202ENST00000466154 KRT87PA6NCN2 255 aa16.13■□□□□ 0.17
SLX4-202ENST00000466154 TBC1D4O60343 1298 aa16.13■□□□□ 0.17
SLX4-202ENST00000466154 ALDH1A1P00352 501 aa16.13■□□□□ 0.17
SLX4-202ENST00000466154 PSMD8P48556 350 aa16.13■□□□□ 0.17
SLX4-202ENST00000466154 MAPK10P53779 464 aa16.13■□□□□ 0.17
SLX4-202ENST00000466154 OR4D2P58180 307 aa16.13■□□□□ 0.17
SLX4-202ENST00000466154 ERVK-8P63133 956 aa16.13■□□□□ 0.17
SLX4-202ENST00000466154 GTF2H2Q13888 395 aa16.13■□□□□ 0.17
SLX4-202ENST00000466154 RFTN2Q52LD8 501 aaPredicted RBP16.13■□□□□ 0.17
SLX4-202ENST00000466154 TMEM214Q6NUQ4 689 aaKnown RBP16.13■□□□□ 0.17
SLX4-202ENST00000466154 GTF2H2CQ6P1K8 395 aa16.13■□□□□ 0.17
SLX4-202ENST00000466154 PRMT9Q6P2P2 845 aa16.13■□□□□ 0.17
SLX4-202ENST00000466154 Q6ZSR9 355 aa16.13■□□□□ 0.17
SLX4-202ENST00000466154 CHST15Q7LFX5 561 aaPredicted RBP16.13■□□□□ 0.17
SLX4-202ENST00000466154 DNAJB7Q7Z6W7 309 aaPredicted RBP16.13■□□□□ 0.17
SLX4-202ENST00000466154 EPHX4Q8IUS5 362 aa16.13■□□□□ 0.17
SLX4-202ENST00000466154 LRRC43Q8N309 656 aa16.13■□□□□ 0.17
SLX4-202ENST00000466154 PDZD8Q8NEN9 1154 aa16.13■□□□□ 0.17
SLX4-202ENST00000466154 PLD4Q96BZ4 506 aa16.13■□□□□ 0.17
SLX4-202ENST00000466154 THUMPD3Q9BV44 507 aaKnown RBP16.13■□□□□ 0.17
SLX4-202ENST00000466154 MRPL9Q9BYD2 267 aaKnown RBP16.13■□□□□ 0.17
SLX4-202ENST00000466154 ZFYVE1Q9HBF4 777 aa16.13■□□□□ 0.17
SLX4-202ENST00000466154 FFAR2O15552 330 aa16.13■□□□□ 0.17
SLX4-202ENST00000466154 H6PDO95479 791 aa16.13■□□□□ 0.17
SLX4-202ENST00000466154 F11P03951 625 aa16.13■□□□□ 0.17
SLX4-202ENST00000466154 PTGER3P43115 390 aa16.13■□□□□ 0.17
SLX4-202ENST00000466154 NKX3-2P78367 333 aa16.13■□□□□ 0.17
SLX4-202ENST00000466154 PRKG2Q13237 762 aa16.13■□□□□ 0.17
SLX4-202ENST00000466154 SELPLGQ14242 412 aa16.13■□□□□ 0.17
SLX4-202ENST00000466154 IMPG1Q17R60 797 aa16.13■□□□□ 0.17
SLX4-202ENST00000466154 NCEH1Q6PIU2 408 aa16.13■□□□□ 0.17
SLX4-202ENST00000466154 TXNDC11Q6PKC3 985 aa16.13■□□□□ 0.17
SLX4-202ENST00000466154 SPATA19Q7Z5L4 167 aa16.13■□□□□ 0.17
SLX4-202ENST00000466154 TTC30BQ8N4P2 665 aa16.13■□□□□ 0.17
SLX4-202ENST00000466154 KCNJ9Q92806 393 aa16.13■□□□□ 0.17
SLX4-202ENST00000466154 ULK4Q96C45 1275 aa16.13■□□□□ 0.17
SLX4-202ENST00000466154 VN1R3Q9BXE9 311 aa16.13■□□□□ 0.17
SLX4-202ENST00000466154 OCEL1Q9H607 264 aa16.13■□□□□ 0.17
SLX4-202ENST00000466154 ZNF696Q9H7X3 374 aa16.13■□□□□ 0.17
SLX4-202ENST00000466154 HNRNPRO43390 633 aaKnown RBP16.12■□□□□ 0.17
SLX4-202ENST00000466154 PCSK6P29122 969 aa16.12■□□□□ 0.17
SLX4-202ENST00000466154 BCL2L1Q07817 233 aa16.12■□□□□ 0.17
SLX4-202ENST00000466154 TNK2Q07912 1038 aa16.12■□□□□ 0.17
SLX4-202ENST00000466154 C8orf82Q6P1X6 216 aaPredicted RBP16.12■□□□□ 0.17
SLX4-202ENST00000466154 HACD2Q6Y1H2 254 aa16.12■□□□□ 0.17
SLX4-202ENST00000466154 TSPAN33Q86UF1 283 aa16.12■□□□□ 0.17
SLX4-202ENST00000466154 PROKR1Q8TCW9 393 aa16.12■□□□□ 0.17
SLX4-202ENST00000466154 TTLL2Q9BWV7 592 aa16.12■□□□□ 0.17
SLX4-202ENST00000466154 ACTR3BQ9P1U1 418 aa16.12■□□□□ 0.17
SLX4-202ENST00000466154 THEGQ9P2T0 379 aa16.12■□□□□ 0.17
SLX4-202ENST00000466154 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.12■□□□□ 0.17
SLX4-202ENST00000466154 CLEC4EQ9ULY5 219 aa16.12■□□□□ 0.17
SLX4-202ENST00000466154 VPS4BO75351 444 aa16.12■□□□□ 0.17
SLX4-202ENST00000466154 ESR1P03372 595 aa16.12■□□□□ 0.17
SLX4-202ENST00000466154 NR1H2P55055 460 aa16.12■□□□□ 0.17
SLX4-202ENST00000466154 RPL26P61254 145 aaKnown RBP16.12■□□□□ 0.17
SLX4-202ENST00000466154 CACNG1Q06432 222 aa16.12■□□□□ 0.17
SLX4-202ENST00000466154 RCAN2Q14206 197 aa16.12■□□□□ 0.17
SLX4-202ENST00000466154 PHKG1Q16816 387 aa16.12■□□□□ 0.17
SLX4-202ENST00000466154 ALG1LQ6GMV1 187 aa16.12■□□□□ 0.17
SLX4-202ENST00000466154 B3GNT6Q6ZMB0 384 aa16.12■□□□□ 0.17
SLX4-202ENST00000466154 ADGRG5Q8IZF4 528 aa16.12■□□□□ 0.17
SLX4-202ENST00000466154 FBXO30Q8TB52 745 aa16.12■□□□□ 0.17
SLX4-202ENST00000466154 ASIC4Q96FT7 647 aa16.12■□□□□ 0.17
SLX4-202ENST00000466154 TMEM169Q96HH4 297 aa16.12■□□□□ 0.17
SLX4-202ENST00000466154 IL17CQ9P0M4 197 aa16.12■□□□□ 0.17
SLX4-202ENST00000466154 MTRRQ9UBK8 725 aa16.12■□□□□ 0.17
SLX4-202ENST00000466154 LHX3Q9UBR4 397 aa16.12■□□□□ 0.17
SLX4-202ENST00000466154 PCDHA9Q9Y5H5 950 aa16.12■□□□□ 0.17
SLX4-202ENST00000466154 KANSL1LA0AUZ9 987 aa16.11■□□□□ 0.17
SLX4-202ENST00000466154 AP1G1O43747 822 aa16.11■□□□□ 0.17
SLX4-202ENST00000466154 MATN4O95460 622 aa16.11■□□□□ 0.17
SLX4-202ENST00000466154 ZNF7P17097 686 aaPredicted RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms