RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 SCNN1BP51168 640 aa13.71□□□□□ -0.21
HDAC6-215ENST00000465457 KPNA2P52292 529 aaKnown RBP13.71□□□□□ -0.21
HDAC6-215ENST00000465457 RHOAP61586 193 aa13.71□□□□□ -0.21
HDAC6-215ENST00000465457 PRAMEP78395 509 aa13.71□□□□□ -0.21
HDAC6-215ENST00000465457 E2F1Q01094 437 aa13.71□□□□□ -0.21
HDAC6-215ENST00000465457 PPARDQ03181 441 aa13.71□□□□□ -0.21
HDAC6-215ENST00000465457 CLN3Q13286 438 aa13.71□□□□□ -0.21
HDAC6-215ENST00000465457 MSLNQ13421 630 aaPredicted RBP13.71□□□□□ -0.21
HDAC6-215ENST00000465457 CNGA3Q16281 694 aa13.71□□□□□ -0.21
HDAC6-215ENST00000465457 HNRNPA1L2Q32P51 320 aaKnown RBP13.71□□□□□ -0.21
HDAC6-215ENST00000465457 ESRP1Q6NXG1 681 aaKnown RBP13.71□□□□□ -0.21
HDAC6-215ENST00000465457 OR4C6Q8NH72 309 aa13.71□□□□□ -0.21
HDAC6-215ENST00000465457 ZNF398Q8TD17 642 aa13.71□□□□□ -0.21
HDAC6-215ENST00000465457 STYXQ8WUJ0 223 aa13.71□□□□□ -0.21
HDAC6-215ENST00000465457 ZNF75CPQ92670 426 aaPredicted RBP13.71□□□□□ -0.21
HDAC6-215ENST00000465457 TSPAN17Q96FV3 270 aa13.71□□□□□ -0.21
HDAC6-215ENST00000465457 ATXN7L3BQ96GX2 97 aa13.71□□□□□ -0.21
HDAC6-215ENST00000465457 PRR11Q96HE9 360 aaPredicted RBP13.71□□□□□ -0.21
HDAC6-215ENST00000465457 MYOCQ99972 504 aa13.71□□□□□ -0.21
HDAC6-215ENST00000465457 DPH1Q9BZG8 443 aa13.71□□□□□ -0.21
HDAC6-215ENST00000465457 MANSC1Q9H8J5 431 aa13.71□□□□□ -0.21
HDAC6-215ENST00000465457 SNX15Q9NRS6 342 aa13.71□□□□□ -0.21
HDAC6-215ENST00000465457 THSD1Q9NS62 852 aa13.71□□□□□ -0.21
HDAC6-215ENST00000465457 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.71□□□□□ -0.21
HDAC6-215ENST00000465457 ANKMY1Q9P2S6 941 aa13.71□□□□□ -0.21
HDAC6-215ENST00000465457 VPS51Q9UID3 782 aa13.71□□□□□ -0.21
HDAC6-215ENST00000465457 FZD4Q9ULV1 537 aa13.71□□□□□ -0.21
HDAC6-215ENST00000465457 ATP5BP06576 529 aaKnown RBP13.7□□□□□ -0.22
HDAC6-215ENST00000465457 TROVE2P10155 538 aaKnown RBP eCLIP13.7□□□□□ -0.22
HDAC6-215ENST00000465457 POLR2EP19388 210 aaKnown RBP13.7□□□□□ -0.22
HDAC6-215ENST00000465457 DGKAP23743 735 aa13.7□□□□□ -0.22
HDAC6-215ENST00000465457 PSMA3P25788 255 aa13.7□□□□□ -0.22
HDAC6-215ENST00000465457 CRABP2P29373 138 aa13.7□□□□□ -0.22
HDAC6-215ENST00000465457 SULT2A1Q06520 285 aa13.7□□□□□ -0.22
HDAC6-215ENST00000465457 PDE1CQ14123 709 aaPredicted RBP13.7□□□□□ -0.22
HDAC6-215ENST00000465457 QPCTQ16769 361 aa13.7□□□□□ -0.22
HDAC6-215ENST00000465457 ZNF470Q6ECI4 717 aa13.7□□□□□ -0.22
HDAC6-215ENST00000465457 MRNIPQ6NTE8 343 aa13.7□□□□□ -0.22
HDAC6-215ENST00000465457 KDELC2Q7Z4H8 507 aa13.7□□□□□ -0.22
HDAC6-215ENST00000465457 LSMEM2Q8N112 164 aa13.7□□□□□ -0.22
HDAC6-215ENST00000465457 STK40Q8N2I9 435 aa13.7□□□□□ -0.22
HDAC6-215ENST00000465457 OXR1Q8N573 874 aa13.7□□□□□ -0.22
HDAC6-215ENST00000465457 GBP7Q8N8V2 638 aaPredicted RBP13.7□□□□□ -0.22
HDAC6-215ENST00000465457 MFSD2AQ8NA29 543 aa13.7□□□□□ -0.22
HDAC6-215ENST00000465457 RDH11Q8TC12 318 aa13.7□□□□□ -0.22
HDAC6-215ENST00000465457 ALG14Q96F25 216 aa13.7□□□□□ -0.22
HDAC6-215ENST00000465457 ZNF778Q96MU6 729 aa13.7□□□□□ -0.22
HDAC6-215ENST00000465457 FAM129BQ96TA1 746 aa13.7□□□□□ -0.22
HDAC6-215ENST00000465457 AGAP2Q99490 1192 aa13.7□□□□□ -0.22
HDAC6-215ENST00000465457 ELAC2Q9BQ52 826 aaKnown RBP13.7□□□□□ -0.22
HDAC6-215ENST00000465457 SLC13A1Q9BZW2 595 aa13.7□□□□□ -0.22
HDAC6-215ENST00000465457 LHX3Q9UBR4 397 aa13.7□□□□□ -0.22
HDAC6-215ENST00000465457 SUN2Q9UH99 717 aa13.7□□□□□ -0.22
HDAC6-215ENST00000465457 TLK1Q9UKI8 766 aa13.7□□□□□ -0.22
HDAC6-215ENST00000465457 FBXO5Q9UKT4 447 aa13.7□□□□□ -0.22
HDAC6-215ENST00000465457 PHTF1Q9UMS5 762 aa13.7□□□□□ -0.22
HDAC6-215ENST00000465457 SCML1Q9UN30 329 aa13.7□□□□□ -0.22
HDAC6-215ENST00000465457 ARL2BPQ9Y2Y0 163 aa13.7□□□□□ -0.22
HDAC6-215ENST00000465457 ZFC3H1O60293 1989 aaKnown RBP13.7□□□□□ -0.22
HDAC6-215ENST00000465457 SCN8AQ9UQD0 1980 aa13.7□□□□□ -0.22
HDAC6-215ENST00000465457 C2orf81A6NN90 581 aa13.69□□□□□ -0.22
HDAC6-215ENST00000465457 PFDN6O15212 129 aa13.69□□□□□ -0.22
HDAC6-215ENST00000465457 LDB2O43679 373 aa13.69□□□□□ -0.22
HDAC6-215ENST00000465457 SOCS5O75159 536 aa13.69□□□□□ -0.22
HDAC6-215ENST00000465457 H2AFYO75367 372 aaKnown RBP13.69□□□□□ -0.22
HDAC6-215ENST00000465457 TGDSO95455 350 aa13.69□□□□□ -0.22
HDAC6-215ENST00000465457 IGSF6O95976 241 aa13.69□□□□□ -0.22
HDAC6-215ENST00000465457 CKMT1AP12532 417 aa13.69□□□□□ -0.22
HDAC6-215ENST00000465457 ITGB6P18564 788 aa13.69□□□□□ -0.22
HDAC6-215ENST00000465457 OGNP20774 298 aaKnown RBP13.69□□□□□ -0.22
HDAC6-215ENST00000465457 ARNTP27540 789 aa13.69□□□□□ -0.22
HDAC6-215ENST00000465457 MZF1P28698 734 aaPredicted RBP13.69□□□□□ -0.22
HDAC6-215ENST00000465457 ALDH3A1P30838 453 aa13.69□□□□□ -0.22
HDAC6-215ENST00000465457 SLC1A2P43004 574 aa13.69□□□□□ -0.22
HDAC6-215ENST00000465457 LEPRP48357 1165 aaKnown RBP13.69□□□□□ -0.22
HDAC6-215ENST00000465457 SLC12A2P55011 1212 aa13.69□□□□□ -0.22
HDAC6-215ENST00000465457 POU4F1Q01851 419 aa13.69□□□□□ -0.22
HDAC6-215ENST00000465457 TAF1AQ15573 450 aaPredicted RBP13.69□□□□□ -0.22
HDAC6-215ENST00000465457 ZKSCAN8Q15776 578 aaPredicted RBP13.69□□□□□ -0.22
HDAC6-215ENST00000465457 ISXQ2M1V0 245 aa13.69□□□□□ -0.22
HDAC6-215ENST00000465457 TSNAXIP1Q2TAA8 658 aa13.69□□□□□ -0.22
HDAC6-215ENST00000465457 FSCBQ5H9T9 825 aa13.69□□□□□ -0.22
HDAC6-215ENST00000465457 CRTC1Q6UUV9 634 aa13.69□□□□□ -0.22
HDAC6-215ENST00000465457 C6orf89Q6UWU4 347 aa13.69□□□□□ -0.22
HDAC6-215ENST00000465457 CCDC81Q6ZN84 652 aa13.69□□□□□ -0.22
HDAC6-215ENST00000465457 OR13J1Q8NGT2 312 aa13.69□□□□□ -0.22
HDAC6-215ENST00000465457 GPR150Q8NGU9 434 aa13.69□□□□□ -0.22
HDAC6-215ENST00000465457 ISG20Q96AZ6 181 aaKnown RBP13.69□□□□□ -0.22
HDAC6-215ENST00000465457 APOLD1Q96LR9 279 aa13.69□□□□□ -0.22
HDAC6-215ENST00000465457 STARD5Q9NSY2 213 aa13.69□□□□□ -0.22
HDAC6-215ENST00000465457 SIRPGQ9P1W8 387 aa13.69□□□□□ -0.22
HDAC6-215ENST00000465457 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.69□□□□□ -0.22
HDAC6-215ENST00000465457 KLHL14Q9P2G3 628 aa13.69□□□□□ -0.22
HDAC6-215ENST00000465457 SLC17A6Q9P2U8 582 aa13.69□□□□□ -0.22
HDAC6-215ENST00000465457 SLCO3A1Q9UIG8 710 aa13.69□□□□□ -0.22
HDAC6-215ENST00000465457 VPS9D1Q9Y2B5 631 aa13.69□□□□□ -0.22
HDAC6-215ENST00000465457 SPENQ96T58 3664 aaKnown RBP13.69□□□□□ -0.22
HDAC6-215ENST00000465457 SPTBN1Q01082 2364 aaKnown RBP13.68□□□□□ -0.22
HDAC6-215ENST00000465457 TBC1D3DA0A087WVF3 549 aa13.68□□□□□ -0.22
HDAC6-215ENST00000465457 TBC1D3IA0A087WXS9 549 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms