RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 XRCC1P18887 633 aaPredicted RBP17.37■□□□□ 0.37
VPS52-214ENST00000463486 RPL10P27635 214 aaKnown RBP17.37■□□□□ 0.37
VPS52-214ENST00000463486 CD1CP29017 333 aa17.37■□□□□ 0.37
VPS52-214ENST00000463486 SLC19A1P41440 591 aa17.37■□□□□ 0.37
VPS52-214ENST00000463486 GPR3P46089 330 aa17.37■□□□□ 0.37
VPS52-214ENST00000463486 PRLHRP49683 370 aa17.37■□□□□ 0.37
VPS52-214ENST00000463486 DRG2P55039 364 aaKnown RBP17.37■□□□□ 0.37
VPS52-214ENST00000463486 DR1Q01658 176 aa17.37■□□□□ 0.37
VPS52-214ENST00000463486 CFHR1Q03591 330 aa17.37■□□□□ 0.37
VPS52-214ENST00000463486 SQSTM1Q13501 440 aa17.37■□□□□ 0.37
VPS52-214ENST00000463486 NFE2L1Q14494 772 aa17.37■□□□□ 0.37
VPS52-214ENST00000463486 ITIH4Q14624 930 aa17.37■□□□□ 0.37
VPS52-214ENST00000463486 KIR2DS5Q14953 304 aa17.37■□□□□ 0.37
VPS52-214ENST00000463486 CLCA4Q14CN2 919 aa17.37■□□□□ 0.37
VPS52-214ENST00000463486 ISXQ2M1V0 245 aa17.37■□□□□ 0.37
VPS52-214ENST00000463486 AFTPHQ6ULP2 937 aa17.37■□□□□ 0.37
VPS52-214ENST00000463486 PACS1Q6VY07 963 aa17.37■□□□□ 0.37
VPS52-214ENST00000463486 SYDE1Q6ZW31 735 aaPredicted RBP17.37■□□□□ 0.37
VPS52-214ENST00000463486 Q8N9G6 341 aaPredicted RBP17.37■□□□□ 0.37
VPS52-214ENST00000463486 OR2L2Q8NH16 312 aa17.37■□□□□ 0.37
VPS52-214ENST00000463486 FCRL3Q96P31 734 aaPredicted RBP17.37■□□□□ 0.37
VPS52-214ENST00000463486 XAB2Q9HCS7 855 aaKnown RBP17.37■□□□□ 0.37
VPS52-214ENST00000463486 PCDHB1Q9Y5F3 818 aa17.37■□□□□ 0.37
VPS52-214ENST00000463486 APC2O95996 2303 aa17.37■□□□□ 0.37
VPS52-214ENST00000463486 ZFHX4Q86UP3 3567 aa17.36■□□□□ 0.37
VPS52-214ENST00000463486 PRAMEF33A0A0G2JMD5 474 aa17.36■□□□□ 0.37
VPS52-214ENST00000463486 TRABD2BA6NFA1 517 aa17.36■□□□□ 0.37
VPS52-214ENST00000463486 SDR42E2A6NKP2 422 aa17.36■□□□□ 0.37
VPS52-214ENST00000463486 OR1I1O60431 355 aa17.36■□□□□ 0.37
VPS52-214ENST00000463486 IDSP22304 550 aa17.36■□□□□ 0.37
VPS52-214ENST00000463486 SARNPP82979 210 aaKnown RBP17.36■□□□□ 0.37
VPS52-214ENST00000463486 ZNF572Q7Z3I7 529 aaPredicted RBP17.36■□□□□ 0.37
VPS52-214ENST00000463486 TMEM135Q86UB9 458 aa17.36■□□□□ 0.37
VPS52-214ENST00000463486 LILRA3Q8N6C8 439 aaPredicted RBP17.36■□□□□ 0.37
VPS52-214ENST00000463486 OR6P1Q8NGX9 317 aa17.36■□□□□ 0.37
VPS52-214ENST00000463486 WDR48Q8TAF3 677 aa17.36■□□□□ 0.37
VPS52-214ENST00000463486 DCUN1D1Q96GG9 259 aa17.36■□□□□ 0.37
VPS52-214ENST00000463486 C16orf45Q96MC5 204 aaPredicted RBP17.36■□□□□ 0.37
VPS52-214ENST00000463486 RUNDC3BQ96NL0 473 aa17.36■□□□□ 0.37
VPS52-214ENST00000463486 KRT12Q99456 494 aa17.36■□□□□ 0.37
VPS52-214ENST00000463486 TRIM51Q9BSJ1 452 aa17.36■□□□□ 0.37
VPS52-214ENST00000463486 OSGEPL1Q9H4B0 414 aa17.36■□□□□ 0.37
VPS52-214ENST00000463486 CPNE7Q9UBL6 633 aa17.36■□□□□ 0.37
VPS52-214ENST00000463486 ASIC3Q9UHC3 531 aa17.36■□□□□ 0.37
VPS52-214ENST00000463486 ENTPD2Q9Y5L3 495 aa17.36■□□□□ 0.37
VPS52-214ENST00000463486 IGHV1OR21-1A0A087WYE8 117 aa17.35■□□□□ 0.37
VPS52-214ENST00000463486 C17orf113A0A1B0GUU1 675 aa17.35■□□□□ 0.37
VPS52-214ENST00000463486 OR52A4PA6NMU1 304 aa17.35■□□□□ 0.37
VPS52-214ENST00000463486 RHPN2P1A8MT19 583 aa17.35■□□□□ 0.37
VPS52-214ENST00000463486 D6RAR5 112 aa17.35■□□□□ 0.37
VPS52-214ENST00000463486 CFAP99D6REC4 459 aa17.35■□□□□ 0.37
VPS52-214ENST00000463486 CSO75390 466 aaKnown RBP17.35■□□□□ 0.37
VPS52-214ENST00000463486 AP2A2O94973 939 aa17.35■□□□□ 0.37
VPS52-214ENST00000463486 RALBP11234 206 aa17.35■□□□□ 0.37
VPS52-214ENST00000463486 NSG1P42857 185 aa17.35■□□□□ 0.37
VPS52-214ENST00000463486 DHX34Q14147 1143 aaKnown RBP17.35■□□□□ 0.37
VPS52-214ENST00000463486 SEPT7Q16181 437 aaKnown RBP17.35■□□□□ 0.37
VPS52-214ENST00000463486 MSS51Q4VC12 460 aa17.35■□□□□ 0.37
VPS52-214ENST00000463486 CERS6Q6ZMG9 384 aa17.35■□□□□ 0.37
VPS52-214ENST00000463486 ZNF574Q6ZN55 896 aaPredicted RBP17.35■□□□□ 0.37
VPS52-214ENST00000463486 RBM44Q6ZP01 1051 aaKnown RBP17.35■□□□□ 0.37
VPS52-214ENST00000463486 B3GNT8Q7Z7M8 397 aa17.35■□□□□ 0.37
VPS52-214ENST00000463486 LDB1Q86U70 411 aaPredicted RBP17.35■□□□□ 0.37
VPS52-214ENST00000463486 HOOK3Q86VS8 718 aa17.35■□□□□ 0.37
VPS52-214ENST00000463486 ZNF761Q86XN6 746 aaPredicted RBP17.35■□□□□ 0.37
VPS52-214ENST00000463486 CNTNAP3BQ96NU0 1288 aa17.35■□□□□ 0.37
VPS52-214ENST00000463486 CNTNAP3Q9BZ76 1288 aa17.35■□□□□ 0.37
VPS52-214ENST00000463486 ATXN7L1Q9ULK2 861 aaPredicted RBP17.35■□□□□ 0.37
VPS52-214ENST00000463486 ZCWPW2A0A1B0GU75 182 aa17.34■□□□□ 0.37
VPS52-214ENST00000463486 FAM237BA0A1B0GVD1 139 aa17.34■□□□□ 0.37
VPS52-214ENST00000463486 MAGEB16A2A368 324 aa17.34■□□□□ 0.37
VPS52-214ENST00000463486 KLHL33A6NCF5 533 aa17.34■□□□□ 0.37
VPS52-214ENST00000463486 PDZK1P1A8MUH7 402 aa17.34■□□□□ 0.37
VPS52-214ENST00000463486 CD3EAPO15446 510 aaKnown RBP17.34■□□□□ 0.37
VPS52-214ENST00000463486 VAPBO95292 243 aa17.34■□□□□ 0.37
VPS52-214ENST00000463486 SLC2A4P14672 509 aa17.34■□□□□ 0.37
VPS52-214ENST00000463486 VCLP18206 1134 aa17.34■□□□□ 0.37
VPS52-214ENST00000463486 ALDH4A1P30038 563 aa17.34■□□□□ 0.37
VPS52-214ENST00000463486 PRAMEP78395 509 aa17.34■□□□□ 0.37
VPS52-214ENST00000463486 MRPS25P82663 173 aaKnown RBP17.34■□□□□ 0.37
VPS52-214ENST00000463486 HHEXQ03014 270 aa17.34■□□□□ 0.37
VPS52-214ENST00000463486 ZFP36L1Q07352 338 aaKnown RBP17.34■□□□□ 0.37
VPS52-214ENST00000463486 SPIDRQ14159 915 aa17.34■□□□□ 0.37
VPS52-214ENST00000463486 ANKRD20A4Q4UJ75 823 aa17.34■□□□□ 0.37
VPS52-214ENST00000463486 LYPLAL1Q5VWZ2 237 aa17.34■□□□□ 0.37
VPS52-214ENST00000463486 IZUMO3Q5VZ72 239 aa17.34■□□□□ 0.37
VPS52-214ENST00000463486 KIAA0930Q6ICG6 404 aaPredicted RBP17.34■□□□□ 0.37
VPS52-214ENST00000463486 HIBCHQ6NVY1 386 aaPredicted RBP17.34■□□□□ 0.37
VPS52-214ENST00000463486 UNQ6494/PRO21346Q6UXR6 183 aa17.34■□□□□ 0.37
VPS52-214ENST00000463486 SLC9B2Q86UD5 537 aa17.34■□□□□ 0.37
VPS52-214ENST00000463486 SLITRK4Q8IW52 837 aa17.34■□□□□ 0.37
VPS52-214ENST00000463486 DEPDC7Q96QD5 511 aa17.34■□□□□ 0.37
VPS52-214ENST00000463486 GFM1Q96RP9 751 aaKnown RBP17.34■□□□□ 0.37
VPS52-214ENST00000463486 CCM2Q9BSQ5 444 aa17.34■□□□□ 0.37
VPS52-214ENST00000463486 UCK1Q9HA47 277 aa17.34■□□□□ 0.37
VPS52-214ENST00000463486 PLAC1Q9HBJ0 212 aa17.34■□□□□ 0.37
VPS52-214ENST00000463486 SLC40A1Q9NP59 571 aa17.34■□□□□ 0.37
VPS52-214ENST00000463486 CATSPERZQ9NTU4 200 aa17.34■□□□□ 0.37
VPS52-214ENST00000463486 PIKFYVEQ9Y2I7 2098 aa17.34■□□□□ 0.37
VPS52-214ENST00000463486 SEC31AO94979 1220 aaKnown RBP17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms