RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 CCNL2Q96S94 520 aaPredicted RBP9.99□□□□□ -0.81
SF3A3-204ENST00000462258 DDA1Q9BW61 102 aa9.99□□□□□ -0.81
SF3A3-204ENST00000462258 B3GNT4Q9C0J1 378 aa9.99□□□□□ -0.81
SF3A3-204ENST00000462258 ARNT2Q9HBZ2 717 aa9.99□□□□□ -0.81
SF3A3-204ENST00000462258 WASH6PQ9NQA3 447 aa9.99□□□□□ -0.81
SF3A3-204ENST00000462258 ZNF624Q9P2J8 865 aaPredicted RBP9.99□□□□□ -0.81
SF3A3-204ENST00000462258 PDP2Q9P2J9 529 aa9.99□□□□□ -0.81
SF3A3-204ENST00000462258 KLHL3Q9UH77 587 aa9.99□□□□□ -0.81
SF3A3-204ENST00000462258 PCDHGA3Q9Y5H0 932 aa9.99□□□□□ -0.81
SF3A3-204ENST00000462258 ATRXP46100 2492 aa9.98□□□□□ -0.81
SF3A3-204ENST00000462258 A8MU76 341 aa9.98□□□□□ -0.81
SF3A3-204ENST00000462258 B4E171 279 aa9.98□□□□□ -0.81
SF3A3-204ENST00000462258 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.98□□□□□ -0.81
SF3A3-204ENST00000462258 STMND1H3BQB6 276 aa9.98□□□□□ -0.81
SF3A3-204ENST00000462258 K7ENP7 123 aa9.98□□□□□ -0.81
SF3A3-204ENST00000462258 ERVH48-1M5A8F1 160 aa9.98□□□□□ -0.81
SF3A3-204ENST00000462258 CCL22O00626 93 aa9.98□□□□□ -0.81
SF3A3-204ENST00000462258 ATXN7O15265 892 aaPredicted RBP9.98□□□□□ -0.81
SF3A3-204ENST00000462258 LDB2O43679 373 aa9.98□□□□□ -0.81
SF3A3-204ENST00000462258 LIASO43766 372 aa9.98□□□□□ -0.81
SF3A3-204ENST00000462258 KCNJ13O60928 360 aa9.98□□□□□ -0.81
SF3A3-204ENST00000462258 POP7O75817 140 aaKnown RBP9.98□□□□□ -0.81
SF3A3-204ENST00000462258 UBXN7O94888 489 aa9.98□□□□□ -0.81
SF3A3-204ENST00000462258 AP2A1O95782 977 aa9.98□□□□□ -0.81
SF3A3-204ENST00000462258 TYRP1P17643 537 aa9.98□□□□□ -0.81
SF3A3-204ENST00000462258 MC4RP32245 332 aa9.98□□□□□ -0.81
SF3A3-204ENST00000462258 TSPAN7P41732 249 aa9.98□□□□□ -0.81
SF3A3-204ENST00000462258 ARSDP51689 593 aa9.98□□□□□ -0.81
SF3A3-204ENST00000462258 XIAPP98170 497 aa9.98□□□□□ -0.81
SF3A3-204ENST00000462258 RHDQ02161 417 aa9.98□□□□□ -0.81
SF3A3-204ENST00000462258 SRSF6Q13247 344 aaKnown RBP9.98□□□□□ -0.81
SF3A3-204ENST00000462258 SEPT6Q14141 434 aa9.98□□□□□ -0.81
SF3A3-204ENST00000462258 GPR18Q14330 331 aa9.98□□□□□ -0.81
SF3A3-204ENST00000462258 NFE2L1Q14494 772 aa9.98□□□□□ -0.81
SF3A3-204ENST00000462258 CLCA4Q14CN2 919 aa9.98□□□□□ -0.81
SF3A3-204ENST00000462258 OASLQ15646 514 aaKnown RBP9.98□□□□□ -0.81
SF3A3-204ENST00000462258 MANEAQ5SRI9 462 aa9.98□□□□□ -0.81
SF3A3-204ENST00000462258 FNBP1LQ5T0N5 605 aa9.98□□□□□ -0.81
SF3A3-204ENST00000462258 INO80CQ6PI98 192 aaPredicted RBP9.98□□□□□ -0.81
SF3A3-204ENST00000462258 TMEM220Q6QAJ8 160 aa9.98□□□□□ -0.81
SF3A3-204ENST00000462258 FAM83HQ6ZRV2 1179 aaPredicted RBP9.98□□□□□ -0.81
SF3A3-204ENST00000462258 ARHGAP22Q7Z5H3 698 aa9.98□□□□□ -0.81
SF3A3-204ENST00000462258 SNX20Q7Z614 316 aa9.98□□□□□ -0.81
SF3A3-204ENST00000462258 VASH2Q86V25 355 aa9.98□□□□□ -0.81
SF3A3-204ENST00000462258 SLC13A5Q86YT5 568 aaPredicted RBP9.98□□□□□ -0.81
SF3A3-204ENST00000462258 PLXDC1Q8IUK5 500 aa9.98□□□□□ -0.81
SF3A3-204ENST00000462258 NXPE1Q8N323 547 aa9.98□□□□□ -0.81
SF3A3-204ENST00000462258 BEND7Q8N7W2 519 aaPredicted RBP9.98□□□□□ -0.81
SF3A3-204ENST00000462258 BMPERQ8N8U9 685 aa9.98□□□□□ -0.81
SF3A3-204ENST00000462258 NAT14Q8WUY8 206 aa9.98□□□□□ -0.81
SF3A3-204ENST00000462258 SNRNP27Q8WVK2 155 aaKnown RBP9.98□□□□□ -0.81
SF3A3-204ENST00000462258 RSC1A1Q92681 617 aa9.98□□□□□ -0.81
SF3A3-204ENST00000462258 ULK4Q96C45 1275 aa9.98□□□□□ -0.81
SF3A3-204ENST00000462258 RTP4Q96DX8 246 aa9.98□□□□□ -0.81
SF3A3-204ENST00000462258 DNAJC1Q96KC8 554 aaKnown RBP9.98□□□□□ -0.81
SF3A3-204ENST00000462258 C19orf43Q9BQ61 176 aa9.98□□□□□ -0.81
SF3A3-204ENST00000462258 FRMD8P1Q9BZ68 369 aaPredicted RBP9.98□□□□□ -0.81
SF3A3-204ENST00000462258 OCIAD1Q9NX40 245 aa9.98□□□□□ -0.81
SF3A3-204ENST00000462258 SLC39A1Q9NY26 324 aa9.98□□□□□ -0.81
SF3A3-204ENST00000462258 OGFRQ9NZT2 677 aa9.98□□□□□ -0.81
SF3A3-204ENST00000462258 FAM8A1Q9UBU6 413 aa9.98□□□□□ -0.81
SF3A3-204ENST00000462258 PSMD13Q9UNM6 376 aa9.98□□□□□ -0.81
SF3A3-204ENST00000462258 WDR37Q9Y2I8 494 aa9.98□□□□□ -0.81
SF3A3-204ENST00000462258 PCDHB11Q9Y5F2 797 aa9.98□□□□□ -0.81
SF3A3-204ENST00000462258 SLC30A1Q9Y6M5 507 aa9.98□□□□□ -0.81
SF3A3-204ENST00000462258 PIKFYVEQ9Y2I7 2098 aa9.98□□□□□ -0.81
SF3A3-204ENST00000462258 KALRNO60229 2985 aa9.97□□□□□ -0.81
SF3A3-204ENST00000462258 AGAP14A8MT82 685 aa9.97□□□□□ -0.81
SF3A3-204ENST00000462258 CFAP99D6REC4 459 aa9.97□□□□□ -0.81
SF3A3-204ENST00000462258 IFNB1P01574 187 aa9.97□□□□□ -0.81
SF3A3-204ENST00000462258 C9P02748 559 aa9.97□□□□□ -0.81
SF3A3-204ENST00000462258 ANKRD34CP0C6C1 535 aa9.97□□□□□ -0.81
SF3A3-204ENST00000462258 RALBP11234 206 aa9.97□□□□□ -0.81
SF3A3-204ENST00000462258 AMD1P17707 334 aa9.97□□□□□ -0.81
SF3A3-204ENST00000462258 PRLHRP49683 370 aa9.97□□□□□ -0.81
SF3A3-204ENST00000462258 ATP1A2P50993 1020 aa9.97□□□□□ -0.81
SF3A3-204ENST00000462258 POU6F1Q14863 301 aa9.97□□□□□ -0.81
SF3A3-204ENST00000462258 PLCL1Q15111 1095 aa9.97□□□□□ -0.81
SF3A3-204ENST00000462258 RPS6KA1Q15418 735 aa9.97□□□□□ -0.81
SF3A3-204ENST00000462258 BCL7AQ4VC05 210 aa9.97□□□□□ -0.81
SF3A3-204ENST00000462258 DCAF12Q5T6F0 453 aa9.97□□□□□ -0.81
SF3A3-204ENST00000462258 MEI1Q5TIA1 1274 aa9.97□□□□□ -0.81
SF3A3-204ENST00000462258 KIAA1614Q5VZ46 1190 aa9.97□□□□□ -0.81
SF3A3-204ENST00000462258 ANKS6Q68DC2 871 aa9.97□□□□□ -0.81
SF3A3-204ENST00000462258 DTX1Q86Y01 620 aa9.97□□□□□ -0.81
SF3A3-204ENST00000462258 UBE2Q2Q8WVN8 375 aa9.97□□□□□ -0.81
SF3A3-204ENST00000462258 C1orf54Q8WWF1 131 aa9.97□□□□□ -0.81
SF3A3-204ENST00000462258 SGF29Q96ES7 293 aa9.97□□□□□ -0.81
SF3A3-204ENST00000462258 DCUN1D1Q96GG9 259 aa9.97□□□□□ -0.81
SF3A3-204ENST00000462258 TGM7Q96PF1 710 aa9.97□□□□□ -0.81
SF3A3-204ENST00000462258 TEFMQ96QE5 360 aaKnown RBP9.97□□□□□ -0.81
SF3A3-204ENST00000462258 COPS8Q99627 209 aa9.97□□□□□ -0.81
SF3A3-204ENST00000462258 ASPSCR1Q9BZE9 553 aa9.97□□□□□ -0.81
SF3A3-204ENST00000462258 SLC40A1Q9NP59 571 aa9.97□□□□□ -0.81
SF3A3-204ENST00000462258 LZTFL1Q9NQ48 299 aa9.97□□□□□ -0.81
SF3A3-204ENST00000462258 IMP3Q9NV31 184 aaKnown RBP9.97□□□□□ -0.81
SF3A3-204ENST00000462258 PIH1D1Q9NWS0 290 aaKnown RBP9.97□□□□□ -0.81
SF3A3-204ENST00000462258 B3GALT1Q9Y5Z6 326 aa9.97□□□□□ -0.81
SF3A3-204ENST00000462258 DNMT3AQ9Y6K1 912 aaPredicted RBP9.97□□□□□ -0.81
SF3A3-204ENST00000462258 KLHL33A6NCF5 533 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms