RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 FAM8A1Q9UBU6 413 aa15.13■□□□□ 0.01
VARS-219ENST00000461328 PRAMEF33A0A0G2JMD5 474 aa15.12■□□□□ 0.01
VARS-219ENST00000461328 TEX51A0A1B0GUA7 166 aa15.12■□□□□ 0.01
VARS-219ENST00000461328 EIF4E1BA6NMX2 242 aaKnown RBP15.12■□□□□ 0.01
VARS-219ENST00000461328 PRAMEF10O60809 474 aa15.12■□□□□ 0.01
VARS-219ENST00000461328 POP7O75817 140 aaKnown RBP15.12■□□□□ 0.01
VARS-219ENST00000461328 VIPP01282 170 aa15.12■□□□□ 0.01
VARS-219ENST00000461328 THRAP10827 490 aa15.12■□□□□ 0.01
VARS-219ENST00000461328 RPL10P27635 214 aaKnown RBP15.12■□□□□ 0.01
VARS-219ENST00000461328 CSTF2P33240 577 aaKnown RBP eCLIP15.12■□□□□ 0.01
VARS-219ENST00000461328 CA5AP35218 305 aa15.12■□□□□ 0.01
VARS-219ENST00000461328 HALP42357 657 aa15.12■□□□□ 0.01
VARS-219ENST00000461328 KCNJ1P48048 391 aa15.12■□□□□ 0.01
VARS-219ENST00000461328 DRG2P55039 364 aaKnown RBP15.12■□□□□ 0.01
VARS-219ENST00000461328 CFHR1Q03591 330 aa15.12■□□□□ 0.01
VARS-219ENST00000461328 MSLNQ13421 630 aaPredicted RBP15.12■□□□□ 0.01
VARS-219ENST00000461328 SEMA5AQ13591 1074 aa15.12■□□□□ 0.01
VARS-219ENST00000461328 TRA2AQ13595 282 aaKnown RBP eCLIP15.12■□□□□ 0.01
VARS-219ENST00000461328 CCDC38Q502W7 563 aa15.12■□□□□ 0.01
VARS-219ENST00000461328 ARHGAP40Q5TG30 622 aa15.12■□□□□ 0.01
VARS-219ENST00000461328 TMEM164Q5U3C3 297 aa15.12■□□□□ 0.01
VARS-219ENST00000461328 DRICH1Q6PGQ1 229 aaPredicted RBP15.12■□□□□ 0.01
VARS-219ENST00000461328 TAS2R42Q7RTR8 314 aa15.12■□□□□ 0.01
VARS-219ENST00000461328 SNX20Q7Z614 316 aa15.12■□□□□ 0.01
VARS-219ENST00000461328 AMZ2Q86W34 360 aa15.12■□□□□ 0.01
VARS-219ENST00000461328 REXO1L1PQ8IX06 675 aa15.12■□□□□ 0.01
VARS-219ENST00000461328 GLIS1Q8NBF1 620 aa15.12■□□□□ 0.01
VARS-219ENST00000461328 STYXQ8WUJ0 223 aa15.12■□□□□ 0.01
VARS-219ENST00000461328 CXorf40BQ96DE9 158 aa15.12■□□□□ 0.01
VARS-219ENST00000461328 ZNF514Q96K75 400 aaPredicted RBP15.12■□□□□ 0.01
VARS-219ENST00000461328 PBKQ96KB5 322 aa15.12■□□□□ 0.01
VARS-219ENST00000461328 BBC3Q96PG8 261 aaPredicted RBP15.12■□□□□ 0.01
VARS-219ENST00000461328 COPS8Q99627 209 aa15.12■□□□□ 0.01
VARS-219ENST00000461328 TMEM9Q9P0T7 183 aa15.12■□□□□ 0.01
VARS-219ENST00000461328 CCL4P13236 92 aa15.11■□□□□ 0.01
VARS-219ENST00000461328 RPL22P35268 128 aaKnown RBP15.11■□□□□ 0.01
VARS-219ENST00000461328 EPHA4P54764 986 aa15.11■□□□□ 0.01
VARS-219ENST00000461328 XIAPP98170 497 aa15.11■□□□□ 0.01
VARS-219ENST00000461328 VAC14Q08AM6 782 aa15.11■□□□□ 0.01
VARS-219ENST00000461328 LAMB3Q13751 1172 aa15.11■□□□□ 0.01
VARS-219ENST00000461328 SKIDA1Q1XH10 827 aa15.11■□□□□ 0.01
VARS-219ENST00000461328 TMEM71Q6P5X7 295 aa15.11■□□□□ 0.01
VARS-219ENST00000461328 C4orf22Q6V702 233 aa15.11■□□□□ 0.01
VARS-219ENST00000461328 NXPE1Q8N323 547 aa15.11■□□□□ 0.01
VARS-219ENST00000461328 AGBL5Q8NDL9 886 aa15.11■□□□□ 0.01
VARS-219ENST00000461328 NAT14Q8WUY8 206 aa15.11■□□□□ 0.01
VARS-219ENST00000461328 NCSTNQ92542 709 aa15.11■□□□□ 0.01
VARS-219ENST00000461328 NAP1L3Q99457 506 aaPredicted RBP15.11■□□□□ 0.01
VARS-219ENST00000461328 C19orf43Q9BQ61 176 aa15.11■□□□□ 0.01
VARS-219ENST00000461328 NLE1Q9NVX2 485 aaPredicted RBP15.11■□□□□ 0.01
VARS-219ENST00000461328 ACSL6Q9UKU0 697 aa15.11■□□□□ 0.01
VARS-219ENST00000461328 DRG1Q9Y295 367 aaKnown RBP15.11■□□□□ 0.01
VARS-219ENST00000461328 IGSF10Q6WRI0 2623 aa15.11■□□□□ 0.01
VARS-219ENST00000461328 ZNF106Q9H2Y7 1883 aaKnown RBP15.1■□□□□ 0.01
VARS-219ENST00000461328 PTPRQQ9UMZ3 2332 aa15.1■□□□□ 0.01
VARS-219ENST00000461328 HEATR9A2RTY3 570 aa15.1■□□□□ 0.01
VARS-219ENST00000461328 OR52A4PA6NMU1 304 aa15.1■□□□□ 0.01
VARS-219ENST00000461328 C9orf172C9J069 976 aa15.1■□□□□ 0.01
VARS-219ENST00000461328 PGRMC1O00264 195 aaKnown RBP15.1■□□□□ 0.01
VARS-219ENST00000461328 KCNJ13O60928 360 aa15.1■□□□□ 0.01
VARS-219ENST00000461328 SUN1O94901 812 aa15.1■□□□□ 0.01
VARS-219ENST00000461328 LIPCP11150 499 aa15.1■□□□□ 0.01
VARS-219ENST00000461328 VPS41P49754 854 aa15.1■□□□□ 0.01
VARS-219ENST00000461328 UBE2IP63279 158 aaKnown RBP15.1■□□□□ 0.01
VARS-219ENST00000461328 NFE2L1Q14494 772 aa15.1■□□□□ 0.01
VARS-219ENST00000461328 GPR33Q49SQ1 333 aa15.1■□□□□ 0.01
VARS-219ENST00000461328 SNAP47Q5SQN1 464 aa15.1■□□□□ 0.01
VARS-219ENST00000461328 WDR74Q6RFH5 385 aaPredicted RBP15.1■□□□□ 0.01
VARS-219ENST00000461328 CCDC81Q6ZN84 652 aa15.1■□□□□ 0.01
VARS-219ENST00000461328 C11orf96Q7Z7L8 435 aa15.1■□□□□ 0.01
VARS-219ENST00000461328 BEND7Q8N7W2 519 aaPredicted RBP15.1■□□□□ 0.01
VARS-219ENST00000461328 PRELID2Q8N945 189 aa15.1■□□□□ 0.01
VARS-219ENST00000461328 PPHLN1Q8NEY8 458 aaKnown RBP15.1■□□□□ 0.01
VARS-219ENST00000461328 HEXDCQ8WVB3 486 aa15.1■□□□□ 0.01
VARS-219ENST00000461328 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.1■□□□□ 0.01
VARS-219ENST00000461328 MAGOHBQ96A72 148 aaKnown RBP15.1■□□□□ 0.01
VARS-219ENST00000461328 SGF29Q96ES7 293 aa15.1■□□□□ 0.01
VARS-219ENST00000461328 MS4A14Q96JA4 679 aa15.1■□□□□ 0.01
VARS-219ENST00000461328 CCNL2Q96S94 520 aaPredicted RBP15.1■□□□□ 0.01
VARS-219ENST00000461328 TBC1D10AQ9BXI6 508 aa15.1■□□□□ 0.01
VARS-219ENST00000461328 AP1M1Q9BXS5 423 aa15.1■□□□□ 0.01
VARS-219ENST00000461328 EPB41L1Q9H4G0 881 aa15.1■□□□□ 0.01
VARS-219ENST00000461328 POT1Q9NUX5 634 aa15.1■□□□□ 0.01
VARS-219ENST00000461328 FOXJ2Q9P0K8 574 aa15.1■□□□□ 0.01
VARS-219ENST00000461328 SCHIP1Q9P0W5 487 aaPredicted RBP15.1■□□□□ 0.01
VARS-219ENST00000461328 GOLGA6L10A0A0M3HER8 536 aa15.09■□□□□ 0.01
VARS-219ENST00000461328 LILRA5A6NI73 299 aa15.09■□□□□ 0.01
VARS-219ENST00000461328 A8MU76 341 aa15.09■□□□□ 0.01
VARS-219ENST00000461328 FGF3P11487 239 aaPredicted RBP15.09■□□□□ 0.01
VARS-219ENST00000461328 ACRV1P26436 265 aa15.09■□□□□ 0.01
VARS-219ENST00000461328 GRIA1P42261 906 aa15.09■□□□□ 0.01
VARS-219ENST00000461328 TERF1P54274 439 aa15.09■□□□□ 0.01
VARS-219ENST00000461328 SESN2P58004 480 aaPredicted RBP15.09■□□□□ 0.01
VARS-219ENST00000461328 CACNG1Q06432 222 aa15.09■□□□□ 0.01
VARS-219ENST00000461328 TGIF1Q15583 401 aa15.09■□□□□ 0.01
VARS-219ENST00000461328 TRIP13Q15645 432 aaPredicted RBP15.09■□□□□ 0.01
VARS-219ENST00000461328 AGAP9Q5VTM2 703 aa15.09■□□□□ 0.01
VARS-219ENST00000461328 ABRAXAS1Q6UWZ7 409 aa15.09■□□□□ 0.01
VARS-219ENST00000461328 SERPINA9Q86WD7 417 aa15.09■□□□□ 0.01
VARS-219ENST00000461328 ZFAND4Q86XD8 727 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms