RNA–Protein interactions for RNA: ENST00000457888.2

UBDP1-202, Transcript of ubiquitin D pseudogene 1, humanhuman

BASIC

Gene UBDP1, Length 382 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBDP1-202ENST00000457888 FAM180BQ6P0A1 224 aa4.04□□□□□ -1.76
UBDP1-202ENST00000457888 TRIM65Q6PJ69 517 aa4.04□□□□□ -1.76
UBDP1-202ENST00000457888 TMEM184AQ6ZMB5 413 aa4.04□□□□□ -1.76
UBDP1-202ENST00000457888 IRF2BP2Q7Z5L9 587 aa4.04□□□□□ -1.76
UBDP1-202ENST00000457888 TBC1D1Q86TI0 1168 aaPredicted RBP4.04□□□□□ -1.76
UBDP1-202ENST00000457888 GPR65Q8IYL9 337 aa4.04□□□□□ -1.76
UBDP1-202ENST00000457888 LRRC52Q8N7C0 313 aa4.04□□□□□ -1.76
UBDP1-202ENST00000457888 C12orf76Q8N812 135 aaPredicted RBP4.04□□□□□ -1.76
UBDP1-202ENST00000457888 SLC4A11Q8NBS3 891 aa4.04□□□□□ -1.76
UBDP1-202ENST00000457888 ATAD1Q8NBU5 361 aa4.04□□□□□ -1.76
UBDP1-202ENST00000457888 FBXL13Q8NEE6 735 aa4.04□□□□□ -1.76
UBDP1-202ENST00000457888 OR6Y1Q8NGX8 325 aa4.04□□□□□ -1.76
UBDP1-202ENST00000457888 URGCPQ8TCY9 931 aa4.04□□□□□ -1.76
UBDP1-202ENST00000457888 ABHD5Q8WTS1 349 aa4.04□□□□□ -1.76
UBDP1-202ENST00000457888 THAP4Q8WY91 577 aa4.04□□□□□ -1.76
UBDP1-202ENST00000457888 C3orf49Q96BT1 292 aa4.04□□□□□ -1.76
UBDP1-202ENST00000457888 ZNF707Q96C28 371 aaPredicted RBP4.04□□□□□ -1.76
UBDP1-202ENST00000457888 MRPL38Q96DV4 380 aaKnown RBP4.04□□□□□ -1.76
UBDP1-202ENST00000457888 CCDC34Q96HJ3 373 aa4.04□□□□□ -1.76
UBDP1-202ENST00000457888 ERGIC2Q96RQ1 377 aa4.04□□□□□ -1.76
UBDP1-202ENST00000457888 FNBP1Q96RU3 617 aa4.04□□□□□ -1.76
UBDP1-202ENST00000457888 TSG101Q99816 390 aa4.04□□□□□ -1.76
UBDP1-202ENST00000457888 SYT11Q9BT88 431 aa4.04□□□□□ -1.76
UBDP1-202ENST00000457888 HERC2P3Q9BVR0 1158 aa4.04□□□□□ -1.76
UBDP1-202ENST00000457888 MRPL9Q9BYD2 267 aaKnown RBP4.04□□□□□ -1.76
UBDP1-202ENST00000457888 BRD8Q9H0E9 1235 aa4.04□□□□□ -1.76
UBDP1-202ENST00000457888 ZCWPW1Q9H0M4 648 aa4.04□□□□□ -1.76
UBDP1-202ENST00000457888 MTIF3Q9H2K0 278 aaKnown RBP4.04□□□□□ -1.76
UBDP1-202ENST00000457888 TSPY26PQ9H489 355 aa4.04□□□□□ -1.76
UBDP1-202ENST00000457888 GLOD4Q9HC38 313 aa4.04□□□□□ -1.76
UBDP1-202ENST00000457888 SLC38A7Q9NVC3 462 aa4.04□□□□□ -1.76
UBDP1-202ENST00000457888 TMEM160Q9NX00 188 aa4.04□□□□□ -1.76
UBDP1-202ENST00000457888 MTRRQ9UBK8 725 aa4.04□□□□□ -1.76
UBDP1-202ENST00000457888 DKK3Q9UBP4 350 aa4.04□□□□□ -1.76
UBDP1-202ENST00000457888 CYTH4Q9UIA0 394 aa4.04□□□□□ -1.76
UBDP1-202ENST00000457888 GTF3C4Q9UKN8 822 aa4.04□□□□□ -1.76
UBDP1-202ENST00000457888 ITGA11Q9UKX5 1188 aa4.04□□□□□ -1.76
UBDP1-202ENST00000457888 DRG1Q9Y295 367 aaKnown RBP4.04□□□□□ -1.76
UBDP1-202ENST00000457888 SNX9Q9Y5X1 595 aa4.04□□□□□ -1.76
UBDP1-202ENST00000457888 VPS13AQ96RL7 3174 aa4.04□□□□□ -1.76
UBDP1-202ENST00000457888 TSC2P49815 1807 aa4.04□□□□□ -1.76
UBDP1-202ENST00000457888 ZNF638Q14966 1978 aaKnown RBP4.03□□□□□ -1.76
UBDP1-202ENST00000457888 A1L4Q6 167 aa4.03□□□□□ -1.76
UBDP1-202ENST00000457888 CLDN5O00501 218 aa4.03□□□□□ -1.76
UBDP1-202ENST00000457888 SYN3O14994 580 aa4.03□□□□□ -1.76
UBDP1-202ENST00000457888 P4HA2O15460 535 aa4.03□□□□□ -1.76
UBDP1-202ENST00000457888 HOXC11O43248 304 aaPredicted RBP4.03□□□□□ -1.76
UBDP1-202ENST00000457888 N4BP1O75113 896 aaKnown RBP4.03□□□□□ -1.76
UBDP1-202ENST00000457888 TBX10O75333 385 aa4.03□□□□□ -1.76
UBDP1-202ENST00000457888 RFPL2O75678 378 aa4.03□□□□□ -1.76
UBDP1-202ENST00000457888 CSPG5O95196 566 aa4.03□□□□□ -1.76
UBDP1-202ENST00000457888 TNNC2P02585 160 aa4.03□□□□□ -1.76
UBDP1-202ENST00000457888 TK1P04183 234 aa4.03□□□□□ -1.76
UBDP1-202ENST00000457888 KRT19P08727 400 aa4.03□□□□□ -1.76
UBDP1-202ENST00000457888 TMEM191BP0C7N4 346 aa4.03□□□□□ -1.76
UBDP1-202ENST00000457888 HMGA1P17096 107 aaKnown RBP4.03□□□□□ -1.76
UBDP1-202ENST00000457888 PTMSP20962 102 aa4.03□□□□□ -1.76
UBDP1-202ENST00000457888 WARSP23381 471 aaKnown RBP4.03□□□□□ -1.76
UBDP1-202ENST00000457888 CYP2F1P24903 491 aa4.03□□□□□ -1.76
UBDP1-202ENST00000457888 CCR2P41597 374 aa4.03□□□□□ -1.76
UBDP1-202ENST00000457888 MTIF2P46199 727 aaKnown RBP4.03□□□□□ -1.76
UBDP1-202ENST00000457888 TAF6P49848 677 aa4.03□□□□□ -1.76
UBDP1-202ENST00000457888 MXI1P50539 228 aa4.03□□□□□ -1.76
UBDP1-202ENST00000457888 CLCN4P51793 760 aa4.03□□□□□ -1.76
UBDP1-202ENST00000457888 NDST1P52848 882 aa4.03□□□□□ -1.76
UBDP1-202ENST00000457888 AP3M2P53677 418 aa4.03□□□□□ -1.76
UBDP1-202ENST00000457888 POLE2P56282 527 aa4.03□□□□□ -1.76
UBDP1-202ENST00000457888 FAM3BP58499 235 aaPredicted RBP4.03□□□□□ -1.76
UBDP1-202ENST00000457888 NOP14P78316 857 aaKnown RBP4.03□□□□□ -1.76
UBDP1-202ENST00000457888 ROR1Q01973 937 aa4.03□□□□□ -1.76
UBDP1-202ENST00000457888 UBE3AQ05086 875 aa4.03□□□□□ -1.76
UBDP1-202ENST00000457888 GPR17Q13304 367 aa4.03□□□□□ -1.76
UBDP1-202ENST00000457888 PDCLQ13371 301 aa4.03□□□□□ -1.76
UBDP1-202ENST00000457888 CUL2Q13617 745 aa4.03□□□□□ -1.76
UBDP1-202ENST00000457888 SLC12A1Q13621 1099 aa4.03□□□□□ -1.76
UBDP1-202ENST00000457888 SYCP1Q15431 976 aa4.03□□□□□ -1.76
UBDP1-202ENST00000457888 TBCCQ15814 346 aa4.03□□□□□ -1.76
UBDP1-202ENST00000457888 CCDC40Q4G0X9 1142 aa4.03□□□□□ -1.76
UBDP1-202ENST00000457888 TMEM196Q5HYL7 178 aa4.03□□□□□ -1.76
UBDP1-202ENST00000457888 ATPAF1Q5TC12 328 aaPredicted RBP4.03□□□□□ -1.76
UBDP1-202ENST00000457888 SDHAF4Q5VUM1 108 aa4.03□□□□□ -1.76
UBDP1-202ENST00000457888 PLPP4Q5VZY2 271 aa4.03□□□□□ -1.76
UBDP1-202ENST00000457888 WDR59Q6PJI9 974 aa4.03□□□□□ -1.76
UBDP1-202ENST00000457888 DPY19L3Q6ZPD9 716 aa4.03□□□□□ -1.76
UBDP1-202ENST00000457888 TMEM150AQ86TG1 271 aa4.03□□□□□ -1.76
UBDP1-202ENST00000457888 ACOT1Q86TX2 421 aa4.03□□□□□ -1.76
UBDP1-202ENST00000457888 RBM23Q86U06 439 aaKnown RBP4.03□□□□□ -1.76
UBDP1-202ENST00000457888 CAND1Q86VP6 1230 aaKnown RBP4.03□□□□□ -1.76
UBDP1-202ENST00000457888 CEP57Q86XR8 500 aa4.03□□□□□ -1.76
UBDP1-202ENST00000457888 DNAAF5Q86Y56 855 aa4.03□□□□□ -1.76
UBDP1-202ENST00000457888 PALB2Q86YC2 1186 aa4.03□□□□□ -1.76
UBDP1-202ENST00000457888 CREBRFQ8IUR6 639 aa4.03□□□□□ -1.76
UBDP1-202ENST00000457888 FAM71AQ8IYT1 594 aa4.03□□□□□ -1.76
UBDP1-202ENST00000457888 HACE1Q8IYU2 909 aa4.03□□□□□ -1.76
UBDP1-202ENST00000457888 NRSN1Q8IZ57 195 aa4.03□□□□□ -1.76
UBDP1-202ENST00000457888 FSTL5Q8N475 847 aaPredicted RBP4.03□□□□□ -1.76
UBDP1-202ENST00000457888 STKLD1Q8NE28 680 aa4.03□□□□□ -1.76
UBDP1-202ENST00000457888 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.03□□□□□ -1.76
UBDP1-202ENST00000457888 ZNF461Q8TAF7 563 aa4.03□□□□□ -1.76
UBDP1-202ENST00000457888 SHC3Q92529 594 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms