RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 ARHGAP6O43182 974 aa17.54■□□□□ 0.4
MSH6-207ENST00000456246 POP7O75817 140 aaKnown RBP17.54■□□□□ 0.4
MSH6-207ENST00000456246 UBXN7O94888 489 aa17.54■□□□□ 0.4
MSH6-207ENST00000456246 C9P02748 559 aa17.54■□□□□ 0.4
MSH6-207ENST00000456246 AMD1P17707 334 aa17.54■□□□□ 0.4
MSH6-207ENST00000456246 ITGALP20701 1170 aa17.54■□□□□ 0.4
MSH6-207ENST00000456246 RPL10P27635 214 aaKnown RBP17.54■□□□□ 0.4
MSH6-207ENST00000456246 STIP1P31948 543 aaKnown RBP17.54■□□□□ 0.4
MSH6-207ENST00000456246 ZNF140P52738 457 aaPredicted RBP17.54■□□□□ 0.4
MSH6-207ENST00000456246 CTSCP53634 463 aa17.54■□□□□ 0.4
MSH6-207ENST00000456246 TAF1BQ53T94 588 aaPredicted RBP17.54■□□□□ 0.4
MSH6-207ENST00000456246 SNAP47Q5SQN1 464 aa17.54■□□□□ 0.4
MSH6-207ENST00000456246 KCTD11Q693B1 232 aa17.54■□□□□ 0.4
MSH6-207ENST00000456246 DENND5AQ6IQ26 1287 aa17.54■□□□□ 0.4
MSH6-207ENST00000456246 TMEM220Q6QAJ8 160 aa17.54■□□□□ 0.4
MSH6-207ENST00000456246 ZFAND4Q86XD8 727 aa17.54■□□□□ 0.4
MSH6-207ENST00000456246 BEND7Q8N7W2 519 aaPredicted RBP17.54■□□□□ 0.4
MSH6-207ENST00000456246 DCUN1D1Q96GG9 259 aa17.54■□□□□ 0.4
MSH6-207ENST00000456246 SLC40A1Q9NP59 571 aa17.54■□□□□ 0.4
MSH6-207ENST00000456246 WDR70Q9NW82 654 aa17.54■□□□□ 0.4
MSH6-207ENST00000456246 FKBPLQ9UIM3 349 aa17.54■□□□□ 0.4
MSH6-207ENST00000456246 CFAP99D6REC4 459 aa17.53■□□□□ 0.4
MSH6-207ENST00000456246 GPR39O43194 453 aa17.53■□□□□ 0.4
MSH6-207ENST00000456246 DRG2P55039 364 aaKnown RBP17.53■□□□□ 0.4
MSH6-207ENST00000456246 MC2RQ01718 297 aa17.53■□□□□ 0.4
MSH6-207ENST00000456246 MSLNQ13421 630 aaPredicted RBP17.53■□□□□ 0.4
MSH6-207ENST00000456246 TGIF1Q15583 401 aa17.53■□□□□ 0.4
MSH6-207ENST00000456246 GPR33Q49SQ1 333 aa17.53■□□□□ 0.4
MSH6-207ENST00000456246 BCL7AQ4VC05 210 aa17.53■□□□□ 0.4
MSH6-207ENST00000456246 KLHL35Q6PF15 583 aa17.53■□□□□ 0.4
MSH6-207ENST00000456246 CEACAM20Q6UY09 585 aa17.53■□□□□ 0.4
MSH6-207ENST00000456246 SNX20Q7Z614 316 aa17.53■□□□□ 0.4
MSH6-207ENST00000456246 LINC00523Q86TU6 105 aa17.53■□□□□ 0.4
MSH6-207ENST00000456246 BMPERQ8N8U9 685 aa17.53■□□□□ 0.4
MSH6-207ENST00000456246 ZSCAN1Q8NBB4 408 aa17.53■□□□□ 0.4
MSH6-207ENST00000456246 RTP4Q96DX8 246 aa17.53■□□□□ 0.4
MSH6-207ENST00000456246 SGF29Q96ES7 293 aa17.53■□□□□ 0.4
MSH6-207ENST00000456246 TMEM121Q9BTD3 319 aa17.53■□□□□ 0.4
MSH6-207ENST00000456246 FBXO8Q9NRD0 319 aa17.53■□□□□ 0.4
MSH6-207ENST00000456246 OCIAD1Q9NX40 245 aa17.53■□□□□ 0.4
MSH6-207ENST00000456246 CRLS1Q9UJA2 301 aa17.53■□□□□ 0.4
MSH6-207ENST00000456246 ACSL5Q9ULC5 683 aa17.53■□□□□ 0.4
MSH6-207ENST00000456246 B3GALT1Q9Y5Z6 326 aa17.53■□□□□ 0.4
MSH6-207ENST00000456246 SMG1Q96Q15 3661 aaKnown RBP17.52■□□□□ 0.4
MSH6-207ENST00000456246 A0A0U1RQJ8 604 aa17.52■□□□□ 0.4
MSH6-207ENST00000456246 MGAT4DA6NG13 374 aa17.52■□□□□ 0.4
MSH6-207ENST00000456246 OR2AG2A6NM03 316 aa17.52■□□□□ 0.4
MSH6-207ENST00000456246 OR52A4PA6NMU1 304 aa17.52■□□□□ 0.4
MSH6-207ENST00000456246 ERI2A8K979 691 aaKnown RBP17.52■□□□□ 0.4
MSH6-207ENST00000456246 A8MU76 341 aa17.52■□□□□ 0.4
MSH6-207ENST00000456246 AP2A1O95782 977 aa17.52■□□□□ 0.4
MSH6-207ENST00000456246 CAPZBP47756 277 aa17.52■□□□□ 0.4
MSH6-207ENST00000456246 XIAPP98170 497 aa17.52■□□□□ 0.4
MSH6-207ENST00000456246 OLIG2Q13516 323 aa17.52■□□□□ 0.4
MSH6-207ENST00000456246 GPR18Q14330 331 aa17.52■□□□□ 0.4
MSH6-207ENST00000456246 PTPRCAPQ14761 206 aa17.52■□□□□ 0.4
MSH6-207ENST00000456246 FNBP1LQ5T0N5 605 aa17.52■□□□□ 0.4
MSH6-207ENST00000456246 METRNLQ641Q3 311 aa17.52■□□□□ 0.4
MSH6-207ENST00000456246 OR13C4Q8NGS5 318 aa17.52■□□□□ 0.4
MSH6-207ENST00000456246 OR2L2Q8NH16 312 aa17.52■□□□□ 0.4
MSH6-207ENST00000456246 ZDHHC12Q96GR4 267 aa17.52■□□□□ 0.4
MSH6-207ENST00000456246 LINC00615Q96LM1 132 aaPredicted RBP17.52■□□□□ 0.4
MSH6-207ENST00000456246 C9orf72Q96LT7 481 aa17.52■□□□□ 0.4
MSH6-207ENST00000456246 ALS2CR12Q96Q35 445 aa17.52■□□□□ 0.4
MSH6-207ENST00000456246 COPS8Q99627 209 aa17.52■□□□□ 0.4
MSH6-207ENST00000456246 RAB33BQ9H082 229 aa17.52■□□□□ 0.4
MSH6-207ENST00000456246 EPHA6Q9UF33 1036 aa17.52■□□□□ 0.4
MSH6-207ENST00000456246 GUCA1BQ9UMX6 200 aa17.52■□□□□ 0.4
MSH6-207ENST00000456246 R3HDM2Q9Y2K5 976 aaKnown RBP17.52■□□□□ 0.4
MSH6-207ENST00000456246 SLC30A1Q9Y6M5 507 aa17.52■□□□□ 0.4
MSH6-207ENST00000456246 SDK2Q58EX2 2172 aa17.52■□□□□ 0.39
MSH6-207ENST00000456246 H7C0S8 307 aa17.51■□□□□ 0.39
MSH6-207ENST00000456246 EFSO43281 561 aa17.51■□□□□ 0.39
MSH6-207ENST00000456246 LDB2O43679 373 aa17.51■□□□□ 0.39
MSH6-207ENST00000456246 METTL18O95568 372 aa17.51■□□□□ 0.39
MSH6-207ENST00000456246 TYRP1P17643 537 aa17.51■□□□□ 0.39
MSH6-207ENST00000456246 C19orf57Q0VDD7 668 aa17.51■□□□□ 0.39
MSH6-207ENST00000456246 CLCA4Q14CN2 919 aa17.51■□□□□ 0.39
MSH6-207ENST00000456246 CYB5D1Q6P9G0 228 aa17.51■□□□□ 0.39
MSH6-207ENST00000456246 XKR5Q6UX68 686 aa17.51■□□□□ 0.39
MSH6-207ENST00000456246 ZNF662Q6ZS27 426 aa17.51■□□□□ 0.39
MSH6-207ENST00000456246 NXPE1Q8N323 547 aa17.51■□□□□ 0.39
MSH6-207ENST00000456246 ZFPM2Q8WW38 1151 aa17.51■□□□□ 0.39
MSH6-207ENST00000456246 TTC9Q92623 222 aa17.51■□□□□ 0.39
MSH6-207ENST00000456246 VPS37BQ9H9H4 285 aa17.51■□□□□ 0.39
MSH6-207ENST00000456246 OGFRQ9NZT2 677 aa17.51■□□□□ 0.39
MSH6-207ENST00000456246 KLHL3Q9UH77 587 aa17.51■□□□□ 0.39
MSH6-207ENST00000456246 WDR37Q9Y2I8 494 aa17.51■□□□□ 0.39
MSH6-207ENST00000456246 KCTD3Q9Y597 815 aa17.51■□□□□ 0.39
MSH6-207ENST00000456246 CAPN5O15484 640 aaPredicted RBP17.5■□□□□ 0.39
MSH6-207ENST00000456246 NRDCO43847 1150 aa17.5■□□□□ 0.39
MSH6-207ENST00000456246 GAS8O95995 478 aa17.5■□□□□ 0.39
MSH6-207ENST00000456246 ITGB2P05107 769 aa17.5■□□□□ 0.39
MSH6-207ENST00000456246 CCDC175P0C221 793 aa17.5■□□□□ 0.39
MSH6-207ENST00000456246 SLC35G4P0C7Q5 338 aa17.5■□□□□ 0.39
MSH6-207ENST00000456246 MTHFD1P11586 935 aaKnown RBP17.5■□□□□ 0.39
MSH6-207ENST00000456246 CA5AP35218 305 aa17.5■□□□□ 0.39
MSH6-207ENST00000456246 PRLHRP49683 370 aa17.5■□□□□ 0.39
MSH6-207ENST00000456246 ARSDP51689 593 aa17.5■□□□□ 0.39
MSH6-207ENST00000456246 GDF10P55107 478 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms