RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 THSD1Q9NS62 852 aa17.04■□□□□ 0.32
USP39-208ENST00000455732 KCND1Q9NSA2 647 aa17.04■□□□□ 0.32
USP39-208ENST00000455732 SMARCAL1Q9NZC9 954 aa17.04■□□□□ 0.32
USP39-208ENST00000455732 DNAJC16Q9Y2G8 782 aa17.04■□□□□ 0.32
USP39-208ENST00000455732 NEU2Q9Y3R4 380 aa17.04■□□□□ 0.32
USP39-208ENST00000455732 TCAF1Q9Y4C2 921 aa17.04■□□□□ 0.32
USP39-208ENST00000455732 MGAQ8IWI9 3026 aa17.04■□□□□ 0.32
USP39-208ENST00000455732 IGHV1OR21-1A0A087WYE8 117 aa17.03■□□□□ 0.32
USP39-208ENST00000455732 OR2AG2A6NM03 316 aa17.03■□□□□ 0.32
USP39-208ENST00000455732 CFAP99D6REC4 459 aa17.03■□□□□ 0.32
USP39-208ENST00000455732 RRP8O43159 456 aaKnown RBP17.03■□□□□ 0.32
USP39-208ENST00000455732 SGTAO43765 313 aa17.03■□□□□ 0.32
USP39-208ENST00000455732 POP7O75817 140 aaKnown RBP17.03■□□□□ 0.32
USP39-208ENST00000455732 CPNE6O95741 557 aa17.03■□□□□ 0.32
USP39-208ENST00000455732 XRCC1P18887 633 aaPredicted RBP17.03■□□□□ 0.32
USP39-208ENST00000455732 CD1CP29017 333 aa17.03■□□□□ 0.32
USP39-208ENST00000455732 RBMS1P29558 406 aaKnown RBP17.03■□□□□ 0.32
USP39-208ENST00000455732 ALDH4A1P30038 563 aa17.03■□□□□ 0.32
USP39-208ENST00000455732 ABCG1P45844 678 aa17.03■□□□□ 0.32
USP39-208ENST00000455732 PRLHRP49683 370 aa17.03■□□□□ 0.32
USP39-208ENST00000455732 ARSDP51689 593 aa17.03■□□□□ 0.32
USP39-208ENST00000455732 PCBP4P57723 403 aaKnown RBP17.03■□□□□ 0.32
USP39-208ENST00000455732 GNG11P61952 73 aa17.03■□□□□ 0.32
USP39-208ENST00000455732 TSTD2Q5T7W7 516 aa17.03■□□□□ 0.32
USP39-208ENST00000455732 PAPD7Q5XG87 772 aaKnown RBP17.03■□□□□ 0.32
USP39-208ENST00000455732 CCDC137Q6PK04 289 aaKnown RBP17.03■□□□□ 0.32
USP39-208ENST00000455732 LRRC69Q6ZNQ3 347 aa17.03■□□□□ 0.32
USP39-208ENST00000455732 RAB11FIP2Q7L804 512 aa17.03■□□□□ 0.32
USP39-208ENST00000455732 ZNF248Q8NDW4 579 aa17.03■□□□□ 0.32
USP39-208ENST00000455732 CRELD1Q96HD1 420 aa17.03■□□□□ 0.32
USP39-208ENST00000455732 DPYSL5Q9BPU6 564 aa17.03■□□□□ 0.32
USP39-208ENST00000455732 STRADBQ9C0K7 418 aa17.03■□□□□ 0.32
USP39-208ENST00000455732 EPB41L5Q9HCM4 733 aa17.03■□□□□ 0.32
USP39-208ENST00000455732 POT1Q9NUX5 634 aa17.03■□□□□ 0.32
USP39-208ENST00000455732 ZDHHC3Q9NYG2 299 aa17.03■□□□□ 0.32
USP39-208ENST00000455732 SCHIP1Q9P0W5 487 aaPredicted RBP17.03■□□□□ 0.32
USP39-208ENST00000455732 CPNE7Q9UBL6 633 aa17.03■□□□□ 0.32
USP39-208ENST00000455732 LILRA5A6NI73 299 aa17.02■□□□□ 0.32
USP39-208ENST00000455732 PDZK1P1A8MUH7 402 aa17.02■□□□□ 0.32
USP39-208ENST00000455732 PLD2O14939 933 aa17.02■□□□□ 0.32
USP39-208ENST00000455732 ZNF185O15231 689 aa17.02■□□□□ 0.32
USP39-208ENST00000455732 KRT14P02533 472 aa17.02■□□□□ 0.32
USP39-208ENST00000455732 ITGA2BP08514 1039 aa17.02■□□□□ 0.32
USP39-208ENST00000455732 BRAFP15056 766 aa17.02■□□□□ 0.32
USP39-208ENST00000455732 FOXN2P32314 431 aa17.02■□□□□ 0.32
USP39-208ENST00000455732 EPHA4P54764 986 aa17.02■□□□□ 0.32
USP39-208ENST00000455732 GPS1Q13098 491 aa17.02■□□□□ 0.32
USP39-208ENST00000455732 KCNJ11Q14654 390 aa17.02■□□□□ 0.32
USP39-208ENST00000455732 MAP9Q49MG5 647 aa17.02■□□□□ 0.32
USP39-208ENST00000455732 ZRANB3Q5FWF4 1079 aa17.02■□□□□ 0.32
USP39-208ENST00000455732 FNBP1LQ5T0N5 605 aa17.02■□□□□ 0.32
USP39-208ENST00000455732 ARMC3Q5W041 872 aa17.02■□□□□ 0.32
USP39-208ENST00000455732 FOXR1Q6PIV2 292 aa17.02■□□□□ 0.32
USP39-208ENST00000455732 AFTPHQ6ULP2 937 aa17.02■□□□□ 0.32
USP39-208ENST00000455732 ZNF574Q6ZN55 896 aaPredicted RBP17.02■□□□□ 0.32
USP39-208ENST00000455732 ZNF534Q76KX8 674 aa17.02■□□□□ 0.32
USP39-208ENST00000455732 CLEC14AQ86T13 490 aa17.02■□□□□ 0.32
USP39-208ENST00000455732 SERPINA9Q86WD7 417 aa17.02■□□□□ 0.32
USP39-208ENST00000455732 SPACA3Q8IXA5 215 aa17.02■□□□□ 0.32
USP39-208ENST00000455732 PIANPQ8IYJ0 282 aa17.02■□□□□ 0.32
USP39-208ENST00000455732 PPHLN1Q8NEY8 458 aaKnown RBP17.02■□□□□ 0.32
USP39-208ENST00000455732 OR2L2Q8NH16 312 aa17.02■□□□□ 0.32
USP39-208ENST00000455732 GRK7Q8WTQ7 553 aa17.02■□□□□ 0.32
USP39-208ENST00000455732 SGF29Q96ES7 293 aa17.02■□□□□ 0.32
USP39-208ENST00000455732 SGSM3Q96HU1 749 aa17.02■□□□□ 0.32
USP39-208ENST00000455732 SLC38A3Q99624 504 aa17.02■□□□□ 0.32
USP39-208ENST00000455732 NAPGQ99747 312 aaPredicted RBP17.02■□□□□ 0.32
USP39-208ENST00000455732 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.02■□□□□ 0.32
USP39-208ENST00000455732 IL22Q9GZX6 179 aa17.02■□□□□ 0.32
USP39-208ENST00000455732 EPB41L1Q9H4G0 881 aa17.02■□□□□ 0.32
USP39-208ENST00000455732 FAM96AQ9H5X1 160 aa17.02■□□□□ 0.32
USP39-208ENST00000455732 RDH14Q9HBH5 336 aa17.02■□□□□ 0.32
USP39-208ENST00000455732 KCNK4Q9NYG8 393 aa17.02■□□□□ 0.32
USP39-208ENST00000455732 TRBV23OR9-2A0A075B6M9 112 aa17.01■□□□□ 0.31
USP39-208ENST00000455732 CCDC162PA2VCL2 907 aa17.01■□□□□ 0.31
USP39-208ENST00000455732 MGAT4DA6NG13 374 aa17.01■□□□□ 0.31
USP39-208ENST00000455732 TNFSF15O95150 251 aa17.01■□□□□ 0.31
USP39-208ENST00000455732 ATP1B2P14415 290 aaPredicted RBP17.01■□□□□ 0.31
USP39-208ENST00000455732 NPY2RP49146 381 aa17.01■□□□□ 0.31
USP39-208ENST00000455732 CDKN1CP49918 316 aaPredicted RBP17.01■□□□□ 0.31
USP39-208ENST00000455732 TLE3Q04726 772 aa17.01■□□□□ 0.31
USP39-208ENST00000455732 ITIH4Q14624 930 aa17.01■□□□□ 0.31
USP39-208ENST00000455732 TRIP13Q15645 432 aaPredicted RBP17.01■□□□□ 0.31
USP39-208ENST00000455732 SEPT7Q16181 437 aaKnown RBP17.01■□□□□ 0.31
USP39-208ENST00000455732 AMZ1Q400G9 498 aa17.01■□□□□ 0.31
USP39-208ENST00000455732 PCID2Q5JVF3 399 aa17.01■□□□□ 0.31
USP39-208ENST00000455732 METRNLQ641Q3 311 aa17.01■□□□□ 0.31
USP39-208ENST00000455732 LRRC8BQ6P9F7 803 aa17.01■□□□□ 0.31
USP39-208ENST00000455732 PACS1Q6VY07 963 aa17.01■□□□□ 0.31
USP39-208ENST00000455732 FAM83HQ6ZRV2 1179 aaPredicted RBP17.01■□□□□ 0.31
USP39-208ENST00000455732 USP53Q70EK8 1073 aa17.01■□□□□ 0.31
USP39-208ENST00000455732 DET1Q7L5Y6 550 aa17.01■□□□□ 0.31
USP39-208ENST00000455732 PIM3Q86V86 326 aa17.01■□□□□ 0.31
USP39-208ENST00000455732 RBM12BQ8IXT5 1001 aaKnown RBP17.01■□□□□ 0.31
USP39-208ENST00000455732 FBXO39Q8N4B4 442 aa17.01■□□□□ 0.31
USP39-208ENST00000455732 OR10G6Q8NH81 332 aa17.01■□□□□ 0.31
USP39-208ENST00000455732 TMEM159Q96B96 161 aa17.01■□□□□ 0.31
USP39-208ENST00000455732 CCDC97Q96F63 343 aaPredicted RBP17.01■□□□□ 0.31
USP39-208ENST00000455732 ZNF778Q96MU6 729 aa17.01■□□□□ 0.31
USP39-208ENST00000455732 NUDT22Q9BRQ3 303 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms