RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 HSPA14Q0VDF9 509 aa11.62□□□□□ -0.55
VTA1-203ENST00000452973 SBSNQ6UWP8 590 aa11.62□□□□□ -0.55
VTA1-203ENST00000452973 KBTBD6Q86V97 674 aa11.62□□□□□ -0.55
VTA1-203ENST00000452973 C12orf76Q8N812 135 aaPredicted RBP11.62□□□□□ -0.55
VTA1-203ENST00000452973 SCAMP4Q969E2 229 aa11.62□□□□□ -0.55
VTA1-203ENST00000452973 PIDD1Q9HB75 910 aa11.62□□□□□ -0.55
VTA1-203ENST00000452973 MBD1Q9UIS9 605 aaPredicted RBP11.62□□□□□ -0.55
VTA1-203ENST00000452973 ANGPTL3Q9Y5C1 460 aa11.62□□□□□ -0.55
VTA1-203ENST00000452973 STX16O14662 325 aa11.61□□□□□ -0.55
VTA1-203ENST00000452973 FFAR3O14843 346 aa11.61□□□□□ -0.55
VTA1-203ENST00000452973 GPR42O15529 346 aa11.61□□□□□ -0.55
VTA1-203ENST00000452973 CAPN1P07384 714 aa11.61□□□□□ -0.55
VTA1-203ENST00000452973 ACADSP16219 412 aa11.61□□□□□ -0.55
VTA1-203ENST00000452973 AKT1P31749 480 aa11.61□□□□□ -0.55
VTA1-203ENST00000452973 GCKP35557 465 aa11.61□□□□□ -0.55
VTA1-203ENST00000452973 LRP8Q14114 963 aa11.61□□□□□ -0.55
VTA1-203ENST00000452973 CAPRIN1Q14444 709 aaKnown RBP11.61□□□□□ -0.55
VTA1-203ENST00000452973 LETMD1Q6P1Q0 360 aa11.61□□□□□ -0.55
VTA1-203ENST00000452973 TXNDC11Q6PKC3 985 aa11.61□□□□□ -0.55
VTA1-203ENST00000452973 IL27RAQ6UWB1 636 aa11.61□□□□□ -0.55
VTA1-203ENST00000452973 ADAMTSL2Q86TH1 951 aa11.61□□□□□ -0.55
VTA1-203ENST00000452973 GPR65Q8IYL9 337 aa11.61□□□□□ -0.55
VTA1-203ENST00000452973 ZBTB2Q8N680 514 aa11.61□□□□□ -0.55
VTA1-203ENST00000452973 ZNF483Q8TF39 744 aaPredicted RBP11.61□□□□□ -0.55
VTA1-203ENST00000452973 VPS33AQ96AX1 596 aa11.61□□□□□ -0.55
VTA1-203ENST00000452973 LMLNQ96KR4 655 aa11.61□□□□□ -0.55
VTA1-203ENST00000452973 SPATA16Q9BXB7 569 aa11.61□□□□□ -0.55
VTA1-203ENST00000452973 DENND4CQ5VZ89 1909 aa11.61□□□□□ -0.55
VTA1-203ENST00000452973 ANGPT2O15123 496 aa11.61□□□□□ -0.55
VTA1-203ENST00000452973 DGKAP23743 735 aa11.61□□□□□ -0.55
VTA1-203ENST00000452973 CSNK1DP48730 415 aa11.61□□□□□ -0.55
VTA1-203ENST00000452973 SLC7A2P52569 658 aa11.61□□□□□ -0.55
VTA1-203ENST00000452973 ARHGEF7Q14155 803 aa11.61□□□□□ -0.55
VTA1-203ENST00000452973 SGO1Q5FBB7 561 aa11.61□□□□□ -0.55
VTA1-203ENST00000452973 ANO7Q6IWH7 933 aa11.61□□□□□ -0.55
VTA1-203ENST00000452973 METTL3Q86U44 580 aaKnown RBP11.61□□□□□ -0.55
VTA1-203ENST00000452973 ADIPOR2Q86V24 386 aa11.61□□□□□ -0.55
VTA1-203ENST00000452973 RETREG3Q86VR2 466 aa11.61□□□□□ -0.55
VTA1-203ENST00000452973 C7orf61Q8IZ16 206 aa11.61□□□□□ -0.55
VTA1-203ENST00000452973 FNDC5Q8NAU1 212 aa11.61□□□□□ -0.55
VTA1-203ENST00000452973 OR2T11Q8NH01 316 aa11.61□□□□□ -0.55
VTA1-203ENST00000452973 DLG3Q92796 817 aa11.61□□□□□ -0.55
VTA1-203ENST00000452973 TEX37Q96LM6 180 aa11.61□□□□□ -0.55
VTA1-203ENST00000452973 COPS8Q99627 209 aa11.61□□□□□ -0.55
VTA1-203ENST00000452973 FAM126AQ9BYI3 521 aaPredicted RBP11.61□□□□□ -0.55
VTA1-203ENST00000452973 IPPKQ9H8X2 491 aa11.61□□□□□ -0.55
VTA1-203ENST00000452973 COPS7BQ9H9Q2 264 aaPredicted RBP11.61□□□□□ -0.55
VTA1-203ENST00000452973 WWOXQ9NZC7 414 aa11.61□□□□□ -0.55
VTA1-203ENST00000452973 XIRP2A4UGR9 3374 aa11.61□□□□□ -0.55
VTA1-203ENST00000452973 KRT87PA6NCN2 255 aa11.61□□□□□ -0.55
VTA1-203ENST00000452973 H3BNX3 289 aa11.61□□□□□ -0.55
VTA1-203ENST00000452973 RAD51BO15315 384 aa11.61□□□□□ -0.55
VTA1-203ENST00000452973 UROSP10746 265 aa11.61□□□□□ -0.55
VTA1-203ENST00000452973 CEBPBP17676 345 aa11.61□□□□□ -0.55
VTA1-203ENST00000452973 POLR2EP19388 210 aaKnown RBP11.61□□□□□ -0.55
VTA1-203ENST00000452973 HTR6P50406 440 aa11.61□□□□□ -0.55
VTA1-203ENST00000452973 CDC16Q13042 620 aa11.61□□□□□ -0.55
VTA1-203ENST00000452973 BOP1Q14137 746 aaKnown RBP11.61□□□□□ -0.55
VTA1-203ENST00000452973 MAP7D1Q3KQU3 841 aa11.61□□□□□ -0.55
VTA1-203ENST00000452973 ARSIQ5FYB1 569 aa11.61□□□□□ -0.55
VTA1-203ENST00000452973 GOLGA7Q7Z5G4 137 aa11.61□□□□□ -0.55
VTA1-203ENST00000452973 OR2A12Q8NGT7 310 aa11.61□□□□□ -0.55
VTA1-203ENST00000452973 NUDT8Q8WV74 236 aa11.61□□□□□ -0.55
VTA1-203ENST00000452973 STON2Q8WXE9 905 aa11.61□□□□□ -0.55
VTA1-203ENST00000452973 GBF1Q92538 1859 aa11.61□□□□□ -0.55
VTA1-203ENST00000452973 VOPP1Q96AW1 172 aa11.61□□□□□ -0.55
VTA1-203ENST00000452973 CROTQ9UKG9 612 aa11.61□□□□□ -0.55
VTA1-203ENST00000452973 MRPS23Q9Y3D9 190 aaKnown RBP11.61□□□□□ -0.55
VTA1-203ENST00000452973 IRAK3Q9Y616 596 aa11.61□□□□□ -0.55
VTA1-203ENST00000452973 LINC01553A4QN01 128 aa11.6□□□□□ -0.55
VTA1-203ENST00000452973 PRORSD1PA6NEY8 169 aa11.6□□□□□ -0.55
VTA1-203ENST00000452973 KLK8O60259 260 aa11.6□□□□□ -0.55
VTA1-203ENST00000452973 LEFTY1O75610 366 aa11.6□□□□□ -0.55
VTA1-203ENST00000452973 CAPN3P20807 821 aa11.6□□□□□ -0.55
VTA1-203ENST00000452973 PLIN5Q00G26 463 aa11.6□□□□□ -0.55
VTA1-203ENST00000452973 GTF2H2Q13888 395 aa11.6□□□□□ -0.55
VTA1-203ENST00000452973 ZNF648Q5T619 568 aaPredicted RBP11.6□□□□□ -0.55
VTA1-203ENST00000452973 GTF2H2CQ6P1K8 395 aa11.6□□□□□ -0.55
VTA1-203ENST00000452973 TMC5Q6UXY8 1006 aa11.6□□□□□ -0.55
VTA1-203ENST00000452973 GDPD4Q6W3E5 623 aa11.6□□□□□ -0.55
VTA1-203ENST00000452973 PHYKPLQ8IUZ5 450 aa11.6□□□□□ -0.55
VTA1-203ENST00000452973 OR4F6Q8NGB9 312 aa11.6□□□□□ -0.55
VTA1-203ENST00000452973 ITFG1Q8TB96 612 aa11.6□□□□□ -0.55
VTA1-203ENST00000452973 ZFYVE19Q96K21 471 aa11.6□□□□□ -0.55
VTA1-203ENST00000452973 ECSITQ9BQ95 431 aa11.6□□□□□ -0.55
VTA1-203ENST00000452973 SPAG4Q9NPE6 437 aa11.6□□□□□ -0.55
VTA1-203ENST00000452973 ELOVL2Q9NXB9 296 aa11.6□□□□□ -0.55
VTA1-203ENST00000452973 NOTCH4Q99466 2003 aa11.6□□□□□ -0.55
VTA1-203ENST00000452973 TRIM38O00635 465 aa11.6□□□□□ -0.55
VTA1-203ENST00000452973 SYNCRIPO60506 623 aaKnown RBP11.6□□□□□ -0.55
VTA1-203ENST00000452973 VIPR2P41587 438 aa11.6□□□□□ -0.55
VTA1-203ENST00000452973 YBX1P67809 324 aaKnown RBP11.6□□□□□ -0.55
VTA1-203ENST00000452973 CAMK1Q14012 370 aa11.6□□□□□ -0.55
VTA1-203ENST00000452973 PLA2G4EQ3MJ16 856 aa11.6□□□□□ -0.55
VTA1-203ENST00000452973 TCEAL5Q5H9L2 206 aa11.6□□□□□ -0.55
VTA1-203ENST00000452973 ELMSAN1Q6PJG2 1045 aa11.6□□□□□ -0.55
VTA1-203ENST00000452973 ANKRD27Q96NW4 1050 aa11.6□□□□□ -0.55
VTA1-203ENST00000452973 HTATIP2Q9BUP3 242 aa11.6□□□□□ -0.55
VTA1-203ENST00000452973 SPATS2LQ9NUQ6 558 aaKnown RBP11.6□□□□□ -0.55
VTA1-203ENST00000452973 NUDT4Q9NZJ9 180 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms